RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 IQCA1Q86XH1 822 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 OTUD7AQ8TE49 926 aaPredicted RBP16.12■□□□□ 0.17
SMC6-201ENST00000351948 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
SMC6-201ENST00000351948 TIMM10P62072 90 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 SLC12A7Q9Y666 1083 aa16.12■□□□□ 0.17
SMC6-201ENST00000351948 CDC42BPAQ5VT25 1732 aa16.11■□□□□ 0.17
SMC6-201ENST00000351948 TTF1Q15361 905 aaPredicted RBP16.11■□□□□ 0.17
SMC6-201ENST00000351948 JMYQ8N9B5 988 aa16.11■□□□□ 0.17
SMC6-201ENST00000351948 ABCC3O15438 1527 aa16.11■□□□□ 0.17
SMC6-201ENST00000351948 ZBTB7BO15156 539 aaPredicted RBP16.11■□□□□ 0.17
SMC6-201ENST00000351948 TRIM5Q9C035 493 aa16.11■□□□□ 0.17
SMC6-201ENST00000351948 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
SMC6-201ENST00000351948 IPO7O95373 1038 aaKnown RBP16.11■□□□□ 0.17
SMC6-201ENST00000351948 TTLL12Q14166 644 aaPredicted RBP16.11■□□□□ 0.17
SMC6-201ENST00000351948 DCTPP1Q9H773 170 aa16.1■□□□□ 0.17
SMC6-201ENST00000351948 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
SMC6-201ENST00000351948 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
SMC6-201ENST00000351948 HOMER1Q86YM7 354 aa16.1■□□□□ 0.17
SMC6-201ENST00000351948 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
SMC6-201ENST00000351948 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
SMC6-201ENST00000351948 DNAJC5Q9H3Z4 198 aa16.1■□□□□ 0.17
SMC6-201ENST00000351948 GDPD2Q9HCC8 539 aa16.1■□□□□ 0.17
SMC6-201ENST00000351948 TSPY2A6NKD2 308 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 SMC2O95347 1197 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 TNMDQ9H2S6 317 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 ZNF287Q9HBT7 754 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 NAT10Q9H0A0 1025 aaKnown RBP16.09■□□□□ 0.17
SMC6-201ENST00000351948 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 PHKG2P15735 406 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 PICALMQ13492 652 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 TMEM132AQ24JP5 1023 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 PLBD2Q8NHP8 589 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 GOLGA8AA7E2F4 631 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 NECAB1Q8N987 351 aa16.09■□□□□ 0.17
SMC6-201ENST00000351948 ZNF76P36508 570 aa16.08■□□□□ 0.17
SMC6-201ENST00000351948 KCNQ4P56696 695 aa16.08■□□□□ 0.17
SMC6-201ENST00000351948 TMEM67Q5HYA8 995 aa16.08■□□□□ 0.17
SMC6-201ENST00000351948 NOL7Q9UMY1 257 aaKnown RBP16.08■□□□□ 0.17
SMC6-201ENST00000351948 STX8Q9UNK0 236 aa16.08■□□□□ 0.17
SMC6-201ENST00000351948 CAMK4Q16566 473 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
SMC6-201ENST00000351948 NDUFB9Q9Y6M9 179 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 SSFA2P28290 1259 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 EPS15P42566 896 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 PARP3Q9Y6F1 533 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 MCM4P33991 863 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 C8orf76Q96K31 380 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 NEK1Q96PY6 1258 aa16.08■□□□□ 0.16
SMC6-201ENST00000351948 CDCA7Q9BWT1 371 aaPredicted RBP16.08■□□□□ 0.16
SMC6-201ENST00000351948 BAG3O95817 575 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 NMIQ13287 307 aaPredicted RBP16.07■□□□□ 0.16
SMC6-201ENST00000351948 WDR78Q5VTH9 848 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 BRF1Q92994 677 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 TSPY26PQ9H489 355 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 PAG1Q9NWQ8 432 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
SMC6-201ENST00000351948 PNMA6EA0A0J9YXQ4 647 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 MFSD6Q6ZSS7 791 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 SPC24Q8NBT2 197 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 SLC4A4Q9Y6R1 1079 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 ITGA6P23229 1130 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
SMC6-201ENST00000351948 TTLL5Q6EMB2 1281 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 CHST3Q7LGC8 479 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 NYXQ9GZU5 481 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 SEC63Q9UGP8 760 aaKnown RBP16.07■□□□□ 0.16
SMC6-201ENST00000351948 LDHCP07864 332 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 ARHGEF25Q86VW2 580 aa16.07■□□□□ 0.16
SMC6-201ENST00000351948 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
SMC6-201ENST00000351948 RBM8AQ9Y5S9 174 aaKnown RBP16.07■□□□□ 0.16
SMC6-201ENST00000351948 CNBD1Q8NA66 436 aa16.06■□□□□ 0.16
SMC6-201ENST00000351948 TRMT1LQ7Z2T5 733 aaKnown RBP16.06■□□□□ 0.16
SMC6-201ENST00000351948 ZC3H12CQ9C0D7 883 aaKnown RBP16.06■□□□□ 0.16
SMC6-201ENST00000351948 TFIP11Q9UBB9 837 aaKnown RBP16.06■□□□□ 0.16
SMC6-201ENST00000351948 NAA16Q6N069 864 aaPredicted RBP16.06■□□□□ 0.16
SMC6-201ENST00000351948 SLF2Q8IX21 1173 aa16.06■□□□□ 0.16
SMC6-201ENST00000351948 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
SMC6-201ENST00000351948 ESYT1Q9BSJ8 1104 aa16.06■□□□□ 0.16
SMC6-201ENST00000351948 TAF5LO75529 589 aa16.06■□□□□ 0.16
SMC6-201ENST00000351948 RBM26Q5T8P6 1007 aaKnown RBP16.06■□□□□ 0.16
SMC6-201ENST00000351948 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
SMC6-201ENST00000351948 SH3TC1Q8TE82 1336 aa16.06■□□□□ 0.16
SMC6-201ENST00000351948 NAP1L1P55209 391 aaKnown RBP16.05■□□□□ 0.16
SMC6-201ENST00000351948 CFAP45Q9UL16 551 aa16.05■□□□□ 0.16
SMC6-201ENST00000351948 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
SMC6-201ENST00000351948 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
SMC6-201ENST00000351948 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
SMC6-201ENST00000351948 APBA3O96018 575 aa16.05■□□□□ 0.16
SMC6-201ENST00000351948 HMGB1P09429 215 aaKnown RBP16.05■□□□□ 0.16
SMC6-201ENST00000351948 CHMP4BP1P59074 171 aa16.05■□□□□ 0.16
SMC6-201ENST00000351948 FEZ1Q99689 392 aa16.05■□□□□ 0.16
SMC6-201ENST00000351948 PLXNC1O60486 1568 aa16.05■□□□□ 0.16
SMC6-201ENST00000351948 WASF1Q92558 559 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 TBC1D32Q96NH3 1257 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 FAM13BQ9NYF5 915 aa16.04■□□□□ 0.16
SMC6-201ENST00000351948 INSRP06213 1382 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms