RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 NSD2O96028 1365 aa15.49■□□□□ 0.07
IFT88-202ENST00000351808 HMMRO75330 724 aa15.49■□□□□ 0.07
IFT88-202ENST00000351808 CORO7P57737 925 aa15.49■□□□□ 0.07
IFT88-202ENST00000351808 GNL2Q13823 731 aaKnown RBP15.49■□□□□ 0.07
IFT88-202ENST00000351808 SWT1Q5T5J6 900 aaKnown RBP15.49■□□□□ 0.07
IFT88-202ENST00000351808 NECAB1Q8N987 351 aa15.49■□□□□ 0.07
IFT88-202ENST00000351808 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 SALL3Q9BXA9 1300 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 PSDA5PKW4 1024 aaPredicted RBP15.48■□□□□ 0.07
IFT88-202ENST00000351808 FCHSD2O94868 740 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 TPM1P09493 284 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 GSDMDP57764 484 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 MMS22LQ6ZRQ5 1243 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 ZSCAN16Q9H4T2 348 aaPredicted RBP15.48■□□□□ 0.07
IFT88-202ENST00000351808 TTC21AQ8NDW8 1320 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 CAVIN2O95810 425 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 HMOX1P09601 288 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 IFIT2P09913 472 aaKnown RBP15.48■□□□□ 0.07
IFT88-202ENST00000351808 HYPKQ9NX55 129 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 ABCA6Q8N139 1617 aa15.48■□□□□ 0.07
IFT88-202ENST00000351808 USP32Q8NFA0 1604 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 FANCGO15287 622 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 MAP2K2P36507 400 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 LEO1Q8WVC0 666 aaPredicted RBP15.47■□□□□ 0.07
IFT88-202ENST00000351808 PGBD1Q96JS3 809 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 PRAM1Q96QH2 718 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 TRPM2O94759 1503 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 ZNF853P0CG23 659 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 ST3GAL1Q11201 340 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 NFE2L2Q16236 605 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 ARMCX5Q6P1M9 558 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 NBPF11Q86T75 865 aa15.47■□□□□ 0.07
IFT88-202ENST00000351808 SMC2O95347 1197 aa15.46■□□□□ 0.07
IFT88-202ENST00000351808 MAP4K4O95819 1239 aaPredicted RBP15.46■□□□□ 0.07
IFT88-202ENST00000351808 TMEM132EQ6IEE7 984 aa15.46■□□□□ 0.07
IFT88-202ENST00000351808 ANKRD20A12PQ8NF67 263 aa15.46■□□□□ 0.07
IFT88-202ENST00000351808 PARD6BQ9BYG5 372 aa15.46■□□□□ 0.07
IFT88-202ENST00000351808 SCAND2PQ9GZW5 306 aaPredicted RBP15.46■□□□□ 0.07
IFT88-202ENST00000351808 ATP6V1AP38606 617 aa15.46■□□□□ 0.07
IFT88-202ENST00000351808 LRRFIP1Q32MZ4 808 aaKnown RBP15.46■□□□□ 0.07
IFT88-202ENST00000351808 SRRTQ9BXP5 876 aaKnown RBP15.46■□□□□ 0.07
IFT88-202ENST00000351808 OSBPL5Q9H0X9 879 aaPredicted RBP15.46■□□□□ 0.07
IFT88-202ENST00000351808 PLEKHA4Q9H4M7 779 aa15.46■□□□□ 0.07
IFT88-202ENST00000351808 CDC42BPBQ9Y5S2 1711 aa15.46■□□□□ 0.07
IFT88-202ENST00000351808 TDO2P48775 406 aa15.46■□□□□ 0.06
IFT88-202ENST00000351808 SATB1Q01826 763 aa15.46■□□□□ 0.06
IFT88-202ENST00000351808 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.06
IFT88-202ENST00000351808 DHX40Q8IX18 779 aaKnown RBP15.46■□□□□ 0.06
IFT88-202ENST00000351808 GPR161Q8N6U8 529 aaKnown RBP15.46■□□□□ 0.06
IFT88-202ENST00000351808 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.06
IFT88-202ENST00000351808 FBXW7Q969H0 707 aa15.46■□□□□ 0.06
IFT88-202ENST00000351808 PHLPP2Q6ZVD8 1323 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 LONRF2Q1L5Z9 754 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 LRRCC1Q9C099 1032 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 PDE11AQ9HCR9 933 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 CABP2Q9NPB3 220 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 ABCA8O94911 1581 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 TRIM65Q6PJ69 517 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 CEP89Q96ST8 783 aa15.45■□□□□ 0.06
IFT88-202ENST00000351808 SFPQP23246 707 aaKnown RBP eCLIP15.44■□□□□ 0.06
IFT88-202ENST00000351808 MCM6Q14566 821 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 ME3Q16798 604 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 NBPF6Q5VWK0 638 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 TTLL5Q6EMB2 1281 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 TMC6Q7Z403 805 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 FAM177A1Q8N128 213 aaPredicted RBP15.44■□□□□ 0.06
IFT88-202ENST00000351808 NBPF4Q96M43 638 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 PARP3Q9Y6F1 533 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 CARMIL2Q6F5E8 1435 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 RPS6KA5O75582 802 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 TUBB4AP04350 444 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 STX1AQ16623 288 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 MICALL1Q8N3F8 863 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 AOPEPQ8N6M6 819 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 MED4Q9NPJ6 270 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 MAP3K4Q9Y6R4 1608 aa15.44■□□□□ 0.06
IFT88-202ENST00000351808 KIAA0232Q92628 1395 aa15.43■□□□□ 0.06
IFT88-202ENST00000351808 KIF1CO43896 1103 aaKnown RBP15.43■□□□□ 0.06
IFT88-202ENST00000351808 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
IFT88-202ENST00000351808 N4BP1O75113 896 aaKnown RBP15.43■□□□□ 0.06
IFT88-202ENST00000351808 CCDC30Q5VVM6 783 aa15.43■□□□□ 0.06
IFT88-202ENST00000351808 LRRC31Q6UY01 552 aa15.43■□□□□ 0.06
IFT88-202ENST00000351808 DNAAF4Q8WXU2 420 aa15.43■□□□□ 0.06
IFT88-202ENST00000351808 CPP00450 1065 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 APOBRQ0VD83 1088 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 SKIDA1Q1XH10 827 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 EGFL6Q8IUX8 553 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 SPG7Q9UQ90 795 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 YTHDC2Q9H6S0 1430 aaKnown RBP15.42■□□□□ 0.06
IFT88-202ENST00000351808 MYO3AQ8NEV4 1616 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 CFAP65Q6ZU64 1925 aaKnown RBP15.42■□□□□ 0.06
IFT88-202ENST00000351808 FAM83GA6ND36 823 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
IFT88-202ENST00000351808 FBLN1P23142 703 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 ADCK5Q3MIX3 580 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 TADA2BQ86TJ2 420 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 LSG1Q9H089 658 aaKnown RBP15.42■□□□□ 0.06
IFT88-202ENST00000351808 IMPACTQ9P2X3 320 aa15.42■□□□□ 0.06
IFT88-202ENST00000351808 MKRN1Q9UHC7 482 aaKnown RBP15.42■□□□□ 0.06
IFT88-202ENST00000351808 FAN1Q9Y2M0 1017 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms