RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ADCY5O95622 1261 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 CEP57L1Q8IYX8 460 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 OTUD6BQ8N6M0 293 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 TNPO1Q92973 898 aaKnown RBP12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 IRAK4Q9NWZ3 460 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 PPP6R1Q9UPN7 881 aa12.76□□□□□ -0.37
SMARCE1-202ENST00000348513 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 ARMCX6Q7L4S7 300 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 NUP62CLQ9H1M0 184 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 ACEP12821 1306 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 ANKRD18BA2A2Z9 1011 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 SLC5A1P13866 664 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 HDAC1Q13547 482 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 SNRKQ9NRH2 765 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 BMP2KQ9NSY1 1161 aaPredicted RBP12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 FANCAO15360 1455 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 ALDH1L2Q3SY69 923 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
SMARCE1-202ENST00000348513 HMGB1P1B2RPK0 211 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 KIF3CO14782 793 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 URI1O94763 535 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 FLIIQ13045 1269 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 JRKLQ9Y4A0 524 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 PPFIA3O75145 1194 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 GTF3C6Q969F1 213 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 VPS18Q9P253 973 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 CUL7Q14999 1698 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 ZSCAN12O43309 604 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 WASF1Q92558 559 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 SRRTQ9BXP5 876 aaKnown RBP12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 USP25Q9UHP3 1055 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 C6orf229H3BNL8 230 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 KLHL40Q2TBA0 621 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 SUFUQ9UMX1 484 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 DISP3Q9P2K9 1392 aa12.74□□□□□ -0.37
SMARCE1-202ENST00000348513 MAP3K12Q12852 859 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 GIGYF2Q6Y7W6 1299 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 CBFA2T2O43439 604 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 DAAM2Q86T65 1068 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 CCDC144CPQ8IYA2 1237 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 ZNF608Q9ULD9 1512 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 SLU7O95391 586 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 TRIM27P14373 513 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 ZKSCAN8Q15776 578 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 ARFGAP3Q9NP61 516 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 DENND4BO75064 1496 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 CCT2P78371 535 aaKnown RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 TTLL12Q14166 644 aaPredicted RBP12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
SMARCE1-202ENST00000348513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 CCDC181Q5TID7 509 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 RAB11FIP4Q86YS3 637 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 WDR78Q5VTH9 848 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 LRSAM1Q6UWE0 723 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 ERCC3P19447 782 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 ZSCAN26Q16670 478 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 MKRN1Q9UHC7 482 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 CCDC121Q6ZUS5 278 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 UBE3BQ7Z3V4 1068 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 ZNF213O14771 459 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 SNW1Q13573 536 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 TRMT1LQ7Z2T5 733 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
SMARCE1-202ENST00000348513 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
SMARCE1-202ENST00000348513 CEP128Q6ZU80 1094 aa12.71□□□□□ -0.37
SMARCE1-202ENST00000348513 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
SMARCE1-202ENST00000348513 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
SMARCE1-202ENST00000348513 MCTP2Q6DN12 878 aa12.71□□□□□ -0.38
SMARCE1-202ENST00000348513 PI4KAP2A4QPH2 592 aa12.71□□□□□ -0.38
SMARCE1-202ENST00000348513 INPP5BP32019 993 aa12.71□□□□□ -0.38
SMARCE1-202ENST00000348513 PI4KAP1Q8N8J0 262 aa12.71□□□□□ -0.38
SMARCE1-202ENST00000348513 NCAPGQ9BPX3 1015 aa12.71□□□□□ -0.38
SMARCE1-202ENST00000348513 ZNF287Q9HBT7 754 aa12.71□□□□□ -0.38
SMARCE1-202ENST00000348513 ABCC11Q96J66 1382 aa12.71□□□□□ -0.38
SMARCE1-202ENST00000348513 HAND2P61296 217 aa12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 LRRC23Q53EV4 343 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 UBA5Q9GZZ9 404 aa12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 SLC12A7Q9Y666 1083 aa12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 EIF5P55010 431 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 CCDC92Q53HC0 331 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 SH2D4BQ5SQS7 431 aa12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 C14orf93Q9H972 538 aaKnown RBP12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 NCOA1Q15788 1441 aa12.7□□□□□ -0.38
SMARCE1-202ENST00000348513 WHAMMQ8TF30 809 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms