RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 CCDC8Q9H0W5 538 aaPredicted RBP9.58□□□□□ -0.88
NLRP3-202ENST00000348069 PHKG2P15735 406 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 MAPK8IP2Q13387 824 aaPredicted RBP9.58□□□□□ -0.88
NLRP3-202ENST00000348069 DDB1Q16531 1140 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 PIBF1Q8WXW3 757 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 ASAP1Q9ULH1 1129 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 SNRPA1P09661 255 aaKnown RBP9.58□□□□□ -0.88
NLRP3-202ENST00000348069 HSP90B1P14625 803 aaKnown RBP9.58□□□□□ -0.88
NLRP3-202ENST00000348069 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
NLRP3-202ENST00000348069 ANKRD13DQ6ZTN6 518 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
NLRP3-202ENST00000348069 H3BQV1 296 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 IFFO2Q5TF58 517 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 SIRT2Q8IXJ6 389 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 RUFY2Q8WXA3 655 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 FER1L4A9Z1Z3 1794 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 ZNF853P0CG23 659 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 CEP85Q6P2H3 762 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 CCDC83Q8IWF9 413 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 PDLIM2Q96JY6 352 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 TNMDQ9H2S6 317 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 UBE2HP62256 183 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 CWC27Q6UX04 472 aaKnown RBP9.57□□□□□ -0.88
NLRP3-202ENST00000348069 CKAP2LQ8IYA6 745 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 DCAF5Q96JK2 942 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 DNAJC2Q99543 621 aaKnown RBP9.57□□□□□ -0.88
NLRP3-202ENST00000348069 ESYT1Q9BSJ8 1104 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 NUP62CLQ9H1M0 184 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 SLC52A2Q9HAB3 445 aa9.57□□□□□ -0.88
NLRP3-202ENST00000348069 TECPR2O15040 1411 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 STX6O43752 255 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 DTNBO60941 627 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 GPATCH3Q96I76 525 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 ERICH4A6NGS2 130 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 GIGYF1O75420 1035 aaPredicted RBP9.56□□□□□ -0.88
NLRP3-202ENST00000348069 U2AF2P26368 475 aaKnown RBP eCLIP9.56□□□□□ -0.88
NLRP3-202ENST00000348069 KRT85P78386 507 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 LARP1BQ659C4 914 aaKnown RBP9.56□□□□□ -0.88
NLRP3-202ENST00000348069 DNAJC10Q8IXB1 793 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 GTPBP4Q9BZE4 634 aaKnown RBP9.56□□□□□ -0.88
NLRP3-202ENST00000348069 ARHGEF10O15013 1369 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 TNNT1P13805 278 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 ZSCAN20P17040 1043 aaPredicted RBP9.56□□□□□ -0.88
NLRP3-202ENST00000348069 CASTP20810 708 aaKnown RBP9.56□□□□□ -0.88
NLRP3-202ENST00000348069 MAP3K11Q16584 847 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 CNTROBQ8N137 903 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
NLRP3-202ENST00000348069 PTCH1Q13635 1447 aa9.56□□□□□ -0.88
NLRP3-202ENST00000348069 COL3A1P02461 1466 aaPredicted RBP9.55□□□□□ -0.88
NLRP3-202ENST00000348069 BRD1O95696 1058 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 AACSQ86V21 672 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 DIP2AQ14689 1571 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 CCDC66A2RUB6 948 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 KDM4AO75164 1064 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 FOSBP53539 338 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 WWC3Q9ULE0 1092 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 OVOS2A0A0J9YW53 1432 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 OVOS2Q6IE36 1432 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 MED14O60244 1454 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 LRRC7Q96NW7 1537 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 RIOK3O14730 519 aaKnown RBP9.55□□□□□ -0.88
NLRP3-202ENST00000348069 ZSCAN22P10073 491 aaPredicted RBP9.55□□□□□ -0.88
NLRP3-202ENST00000348069 CEBPZQ03701 1054 aaKnown RBP9.55□□□□□ -0.88
NLRP3-202ENST00000348069 CLEC17AQ6ZS10 378 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 FILIP1Q7Z7B0 1213 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 JAKMIP1Q96N16 626 aaKnown RBP9.55□□□□□ -0.88
NLRP3-202ENST00000348069 NDUFB9Q9Y6M9 179 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 PTPRCP08575 1304 aa9.55□□□□□ -0.88
NLRP3-202ENST00000348069 ANKRD26Q9UPS8 1709 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 KIF6Q6ZMV9 814 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 TTLL7Q6ZT98 887 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 BOLA2Q9H3K6 86 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 LIMCH1Q9UPQ0 1083 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 CDK12Q9NYV4 1490 aaPredicted RBP9.54□□□□□ -0.88
NLRP3-202ENST00000348069 C3P01024 1663 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 CCDC186Q7Z3E2 898 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 HOMER1Q86YM7 354 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 INTS4Q96HW7 963 aaKnown RBP9.54□□□□□ -0.88
NLRP3-202ENST00000348069 CYP46A1Q9Y6A2 500 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 NCOA3Q9Y6Q9 1424 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 STARD3NLO95772 234 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 FAM89AQ96GI7 184 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
NLRP3-202ENST00000348069 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 DNM1Q05193 864 aaKnown RBP9.53□□□□□ -0.88
NLRP3-202ENST00000348069 STK3Q13188 491 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 STK11IPQ8N1F8 1099 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 PTGS1P23219 599 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 USP44Q9H0E7 712 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 RNF216Q9NWF9 866 aaPredicted RBP9.53□□□□□ -0.88
NLRP3-202ENST00000348069 TFIP11Q9UBB9 837 aaKnown RBP9.53□□□□□ -0.88
NLRP3-202ENST00000348069 ZDHHC9Q9Y397 364 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 DLC1Q96QB1 1528 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 PDCP20941 246 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 ANAPC15P60006 121 aa9.53□□□□□ -0.88
NLRP3-202ENST00000348069 SPATA32Q96LK8 384 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms