RNA–Protein interactions for RNA: ENST00000346279.3

XAGE3-201, Transcript of X antigen family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XAGE3, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XAGE3-201ENST00000346279 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
XAGE3-201ENST00000346279 TIMP2P16035 220 aa9.43□□□□□ -0.9
XAGE3-201ENST00000346279 NLRP13Q86W25 1043 aa9.43□□□□□ -0.9
XAGE3-201ENST00000346279 GPCPD1Q9NPB8 672 aa9.43□□□□□ -0.9
XAGE3-201ENST00000346279 PRDM11Q9NQV5 511 aa9.43□□□□□ -0.9
XAGE3-201ENST00000346279 DNMT3AQ9Y6K1 912 aaPredicted RBP9.43□□□□□ -0.9
XAGE3-201ENST00000346279 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 SLIT3O75094 1523 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 SPATA31A5Q5VU36 1347 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 SPATA31A7Q8IWB4 1347 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 MAN1A2O60476 641 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 CLCN1P35523 988 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 KCNH2Q12809 1159 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 MON2Q7Z3U7 1717 aa9.42□□□□□ -0.9
XAGE3-201ENST00000346279 USP47Q96K76 1375 aa9.41□□□□□ -0.9
XAGE3-201ENST00000346279 NME9Q86XW9 330 aa9.41□□□□□ -0.9
XAGE3-201ENST00000346279 KRI1Q8N9T8 703 aaKnown RBP9.41□□□□□ -0.9
XAGE3-201ENST00000346279 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
XAGE3-201ENST00000346279 SRCAPQ6ZRS2 3230 aa9.41□□□□□ -0.9
XAGE3-201ENST00000346279 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.9
XAGE3-201ENST00000346279 SPATA31A1Q5TZJ5 1347 aa9.4□□□□□ -0.9
XAGE3-201ENST00000346279 LARP1Q6PKG0 1096 aaKnown RBP9.4□□□□□ -0.9
XAGE3-201ENST00000346279 ARHGEF25Q86VW2 580 aa9.4□□□□□ -0.9
XAGE3-201ENST00000346279 CCER1Q8TC90 406 aaPredicted RBP9.4□□□□□ -0.9
XAGE3-201ENST00000346279 TMC1Q8TDI8 760 aa9.4□□□□□ -0.9
XAGE3-201ENST00000346279 PCDHGC3Q9UN70 934 aa9.4□□□□□ -0.9
XAGE3-201ENST00000346279 RGPD5Q99666 1765 aa9.4□□□□□ -0.91
XAGE3-201ENST00000346279 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
XAGE3-201ENST00000346279 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
XAGE3-201ENST00000346279 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
XAGE3-201ENST00000346279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.39□□□□□ -0.91
XAGE3-201ENST00000346279 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
XAGE3-201ENST00000346279 STRN4Q9NRL3 753 aa9.39□□□□□ -0.91
XAGE3-201ENST00000346279 AATKQ6ZMQ8 1374 aa9.38□□□□□ -0.91
XAGE3-201ENST00000346279 NFAT5O94916 1531 aa9.38□□□□□ -0.91
XAGE3-201ENST00000346279 PPFIA3O75145 1194 aa9.38□□□□□ -0.91
XAGE3-201ENST00000346279 FBLN1P23142 703 aa9.38□□□□□ -0.91
XAGE3-201ENST00000346279 KRT76Q01546 638 aa9.38□□□□□ -0.91
XAGE3-201ENST00000346279 FAM182BQ5T319 152 aa9.38□□□□□ -0.91
XAGE3-201ENST00000346279 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
XAGE3-201ENST00000346279 THSD7AQ9UPZ6 1657 aa9.38□□□□□ -0.91
XAGE3-201ENST00000346279 USP54Q70EL1 1684 aa9.37□□□□□ -0.91
XAGE3-201ENST00000346279 COL5A2P05997 1499 aaPredicted RBP9.37□□□□□ -0.91
XAGE3-201ENST00000346279 FOXK2Q01167 660 aa9.37□□□□□ -0.91
XAGE3-201ENST00000346279 KRT27Q7Z3Y8 459 aa9.37□□□□□ -0.91
XAGE3-201ENST00000346279 KLF16Q9BXK1 252 aaPredicted RBP9.37□□□□□ -0.91
XAGE3-201ENST00000346279 CARD14Q9BXL6 1004 aa9.37□□□□□ -0.91
XAGE3-201ENST00000346279 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
XAGE3-201ENST00000346279 UPP2O95045 317 aa9.36□□□□□ -0.91
XAGE3-201ENST00000346279 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
XAGE3-201ENST00000346279 BARGINQ6ZT62 677 aa9.36□□□□□ -0.91
XAGE3-201ENST00000346279 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
XAGE3-201ENST00000346279 EDC4Q6P2E9 1401 aaKnown RBP9.36□□□□□ -0.91
XAGE3-201ENST00000346279 FYB1O15117 783 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 ZIC2O95409 532 aaPredicted RBP9.35□□□□□ -0.91
XAGE3-201ENST00000346279 IRS1P35568 1242 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 EVA1CP58658 441 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 TMF1P82094 1093 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 ARID5BQ14865 1188 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 HDGFL2Q7Z4V5 671 aaPredicted RBP9.35□□□□□ -0.91
XAGE3-201ENST00000346279 PRR7Q8TB68 274 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 CCDC102AQ96A19 550 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 TERF2IPQ9NYB0 399 aa9.35□□□□□ -0.91
XAGE3-201ENST00000346279 OVOS2A0A0J9YW53 1432 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 OVOS2Q6IE36 1432 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 ZBTB7CA1YPR0 619 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.34□□□□□ -0.91
XAGE3-201ENST00000346279 SLC24A1O60721 1099 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 HSPA5P11021 654 aaKnown RBP9.34□□□□□ -0.91
XAGE3-201ENST00000346279 CTHP32929 405 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 DESI1Q6ICB0 168 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 DEFB132Q7Z7B7 95 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 TCP11L2Q8N4U5 519 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 KCNH5Q8NCM2 988 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 ANKRD36BQ8N2N9 1353 aa9.34□□□□□ -0.91
XAGE3-201ENST00000346279 MYOM1P52179 1685 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 SPDYE5A6NIY4 337 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 BMP2P12643 396 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 CNTNAP3BQ96NU0 1288 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 CDK15Q96Q40 435 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 CNTNAP3Q9BZ76 1288 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 NINLQ9Y2I6 1382 aa9.33□□□□□ -0.92
XAGE3-201ENST00000346279 WDR17Q8IZU2 1322 aa9.32□□□□□ -0.92
XAGE3-201ENST00000346279 NR5A1Q13285 461 aa9.32□□□□□ -0.92
XAGE3-201ENST00000346279 ZNF385CQ66K41 422 aaPredicted RBP9.32□□□□□ -0.92
XAGE3-201ENST00000346279 ITPKCQ96DU7 683 aa9.32□□□□□ -0.92
XAGE3-201ENST00000346279 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
XAGE3-201ENST00000346279 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
XAGE3-201ENST00000346279 THRAP3Q9Y2W1 955 aaKnown RBP9.32□□□□□ -0.92
XAGE3-201ENST00000346279 LTN1O94822 1766 aa9.32□□□□□ -0.92
XAGE3-201ENST00000346279 BLMP54132 1417 aaPredicted RBP9.31□□□□□ -0.92
XAGE3-201ENST00000346279 CRB1P82279 1406 aa9.31□□□□□ -0.92
XAGE3-201ENST00000346279 ADAM23O75077 832 aa9.31□□□□□ -0.92
XAGE3-201ENST00000346279 NDUFV2P19404 249 aa9.31□□□□□ -0.92
XAGE3-201ENST00000346279 MTMR2Q13614 643 aa9.31□□□□□ -0.92
XAGE3-201ENST00000346279 GPR161Q8N6U8 529 aaKnown RBP9.31□□□□□ -0.92
XAGE3-201ENST00000346279 SPIRE2Q8WWL2 714 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms