RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 NPHP1O15259 732 aa20.82■□□□□ 0.92
RAB5C-201ENST00000346213 NCBP3Q53F19 620 aaKnown RBP20.82■□□□□ 0.92
RAB5C-201ENST00000346213 STYK1Q6J9G0 422 aa20.82■□□□□ 0.92
RAB5C-201ENST00000346213 IL16Q14005 1332 aa20.82■□□□□ 0.92
RAB5C-201ENST00000346213 MASTLQ96GX5 879 aa20.81■□□□□ 0.92
RAB5C-201ENST00000346213 TCIRG1Q13488 830 aa20.8■□□□□ 0.92
RAB5C-201ENST00000346213 G2E3Q7L622 706 aa20.8■□□□□ 0.92
RAB5C-201ENST00000346213 FER1L6Q2WGJ9 1857 aa20.8■□□□□ 0.92
RAB5C-201ENST00000346213 ATP5J2-PTCD1G3V325 749 aa20.8■□□□□ 0.92
RAB5C-201ENST00000346213 PLBD2Q8NHP8 589 aa20.8■□□□□ 0.92
RAB5C-201ENST00000346213 ISCA1Q9BUE6 129 aa20.8■□□□□ 0.92
RAB5C-201ENST00000346213 LAMB2P55268 1798 aa20.79■□□□□ 0.92
RAB5C-201ENST00000346213 RNF181Q9P0P0 153 aa20.79■□□□□ 0.92
RAB5C-201ENST00000346213 NPR1P16066 1061 aa20.78■□□□□ 0.92
RAB5C-201ENST00000346213 ANKRD13DQ6ZTN6 518 aa20.78■□□□□ 0.92
RAB5C-201ENST00000346213 HYPKQ9NX55 129 aa20.78■□□□□ 0.92
RAB5C-201ENST00000346213 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
RAB5C-201ENST00000346213 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.92
RAB5C-201ENST00000346213 TWISTNBQ3B726 338 aaPredicted RBP20.77■□□□□ 0.92
RAB5C-201ENST00000346213 NYXQ9GZU5 481 aa20.77■□□□□ 0.92
RAB5C-201ENST00000346213 DDX60Q8IY21 1712 aaKnown RBP20.77■□□□□ 0.92
RAB5C-201ENST00000346213 EXOSC9Q06265 439 aaKnown RBP20.77■□□□□ 0.91
RAB5C-201ENST00000346213 PARP10Q53GL7 1025 aa20.77■□□□□ 0.91
RAB5C-201ENST00000346213 WDR63Q8IWG1 891 aa20.77■□□□□ 0.91
RAB5C-201ENST00000346213 UTP14AQ9BVJ6 771 aaKnown RBP20.77■□□□□ 0.91
RAB5C-201ENST00000346213 TIAM2Q8IVF5 1701 aa20.76■□□□□ 0.91
RAB5C-201ENST00000346213 CNKSR1Q969H4 720 aa20.76■□□□□ 0.91
RAB5C-201ENST00000346213 PDZRN3Q9UPQ7 1066 aa20.76■□□□□ 0.91
RAB5C-201ENST00000346213 COL4A5P29400 1685 aa20.75■□□□□ 0.91
RAB5C-201ENST00000346213 KIF3CO14782 793 aa20.75■□□□□ 0.91
RAB5C-201ENST00000346213 GTF2E1P29083 439 aaPredicted RBP20.75■□□□□ 0.91
RAB5C-201ENST00000346213 NMRK2Q9NPI5 230 aa20.75■□□□□ 0.91
RAB5C-201ENST00000346213 VAMP4O75379 141 aa20.74■□□□□ 0.91
RAB5C-201ENST00000346213 SLC10A5Q5PT55 438 aa20.74■□□□□ 0.91
RAB5C-201ENST00000346213 HOXA10P31260 410 aaPredicted RBP20.73■□□□□ 0.91
RAB5C-201ENST00000346213 PPP1R42Q7Z4L9 355 aa20.73■□□□□ 0.91
RAB5C-201ENST00000346213 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
RAB5C-201ENST00000346213 RTL5Q5HYW3 569 aaPredicted RBP20.73■□□□□ 0.91
RAB5C-201ENST00000346213 JARID2Q92833 1246 aaPredicted RBP20.73■□□□□ 0.91
RAB5C-201ENST00000346213 LMNB1P20700 586 aa20.72■□□□□ 0.91
RAB5C-201ENST00000346213 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
RAB5C-201ENST00000346213 CCDC30Q5VVM6 783 aa20.72■□□□□ 0.91
RAB5C-201ENST00000346213 GPBP1L1Q9HC44 474 aaPredicted RBP20.72■□□□□ 0.91
RAB5C-201ENST00000346213 TRMT112Q9UI30 125 aaKnown RBP20.72■□□□□ 0.91
RAB5C-201ENST00000346213 IGKV5-2P06315 115 aa20.71■□□□□ 0.91
RAB5C-201ENST00000346213 HSP90AB3PQ58FF7 597 aa20.71■□□□□ 0.91
RAB5C-201ENST00000346213 MYD88Q99836 296 aa20.71■□□□□ 0.91
RAB5C-201ENST00000346213 TAF1P21675 1872 aa20.71■□□□□ 0.91
RAB5C-201ENST00000346213 ABCC4O15439 1325 aa20.71■□□□□ 0.91
RAB5C-201ENST00000346213 LTBP3Q9NS15 1303 aa20.71■□□□□ 0.91
RAB5C-201ENST00000346213 CCDC88AQ3V6T2 1871 aa20.7■□□□□ 0.91
RAB5C-201ENST00000346213 RIC3Q7Z5B4 369 aa20.7■□□□□ 0.9
RAB5C-201ENST00000346213 CEP350Q5VT06 3117 aa20.69■□□□□ 0.9
RAB5C-201ENST00000346213 SH3TC1Q8TE82 1336 aa20.69■□□□□ 0.9
RAB5C-201ENST00000346213 C1QTNF8P60827 252 aa20.69■□□□□ 0.9
RAB5C-201ENST00000346213 TAOK3Q9H2K8 898 aa20.69■□□□□ 0.9
RAB5C-201ENST00000346213 MAP3K2Q9Y2U5 619 aa20.69■□□□□ 0.9
RAB5C-201ENST00000346213 PI4KAP2A4QPH2 592 aa20.68■□□□□ 0.9
RAB5C-201ENST00000346213 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
RAB5C-201ENST00000346213 GOLGA2Q08379 1002 aa20.68■□□□□ 0.9
RAB5C-201ENST00000346213 TRIM28Q13263 835 aaKnown RBP20.68■□□□□ 0.9
RAB5C-201ENST00000346213 PI4KAP1Q8N8J0 262 aa20.68■□□□□ 0.9
RAB5C-201ENST00000346213 CDCA7LQ96GN5 454 aa20.68■□□□□ 0.9
RAB5C-201ENST00000346213 ZNF277Q9NRM2 450 aaPredicted RBP20.68■□□□□ 0.9
RAB5C-201ENST00000346213 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
RAB5C-201ENST00000346213 RPGRQ92834 1020 aaKnown RBP20.67■□□□□ 0.9
RAB5C-201ENST00000346213 CRAMP1Q96RY5 1269 aa20.67■□□□□ 0.9
RAB5C-201ENST00000346213 METTL22Q9BUU2 404 aaPredicted RBP20.67■□□□□ 0.9
RAB5C-201ENST00000346213 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
RAB5C-201ENST00000346213 DUOX1Q9NRD9 1551 aa20.66■□□□□ 0.9
RAB5C-201ENST00000346213 POTECB2RU33 542 aa20.66■□□□□ 0.9
RAB5C-201ENST00000346213 CWF19L2Q2TBE0 894 aaKnown RBP20.66■□□□□ 0.9
RAB5C-201ENST00000346213 NLRP3Q96P20 1036 aa20.66■□□□□ 0.9
RAB5C-201ENST00000346213 PPEF1O14829 653 aaPredicted RBP20.65■□□□□ 0.9
RAB5C-201ENST00000346213 ALDH1B1P30837 517 aa20.65■□□□□ 0.9
RAB5C-201ENST00000346213 FKBP4Q02790 459 aaKnown RBP eCLIP20.65■□□□□ 0.9
RAB5C-201ENST00000346213 FLIIQ13045 1269 aa20.65■□□□□ 0.9
RAB5C-201ENST00000346213 KSR2Q6VAB6 950 aa20.65■□□□□ 0.9
RAB5C-201ENST00000346213 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
RAB5C-201ENST00000346213 CELF1Q92879 486 aaKnown RBP20.64■□□□□ 0.89
RAB5C-201ENST00000346213 RBM17Q96I25 401 aaKnown RBP20.64■□□□□ 0.89
RAB5C-201ENST00000346213 ZNF541Q9H0D2 1346 aa20.63■□□□□ 0.89
RAB5C-201ENST00000346213 IRS4O14654 1257 aaPredicted RBP20.63■□□□□ 0.89
RAB5C-201ENST00000346213 STK31Q9BXU1 1019 aa20.63■□□□□ 0.89
RAB5C-201ENST00000346213 F6X3S4 739 aa20.62■□□□□ 0.89
RAB5C-201ENST00000346213 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
RAB5C-201ENST00000346213 RRAGCQ9HB90 399 aa20.62■□□□□ 0.89
RAB5C-201ENST00000346213 LRRC37AA6NMS7 1700 aa20.62■□□□□ 0.89
RAB5C-201ENST00000346213 ZBED9Q6R2W3 1325 aa20.62■□□□□ 0.89
RAB5C-201ENST00000346213 SLFN5Q08AF3 891 aa20.61■□□□□ 0.89
RAB5C-201ENST00000346213 SF3B3Q15393 1217 aaKnown RBP20.61■□□□□ 0.89
RAB5C-201ENST00000346213 MYH16Q9H6N6 1097 aa20.61■□□□□ 0.89
RAB5C-201ENST00000346213 SEC31BQ9NQW1 1179 aa20.61■□□□□ 0.89
RAB5C-201ENST00000346213 GLTPD2A6NH11 291 aa20.61■□□□□ 0.89
RAB5C-201ENST00000346213 NEURL1BA8MQ27 555 aa20.61■□□□□ 0.89
RAB5C-201ENST00000346213 SOGA3Q5TF21 947 aa20.61■□□□□ 0.89
RAB5C-201ENST00000346213 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
RAB5C-201ENST00000346213 PCCAP05165 728 aaPredicted RBP20.6■□□□□ 0.89
RAB5C-201ENST00000346213 GRAPQ13588 217 aa20.6■□□□□ 0.89
RAB5C-201ENST00000346213 GRAPLQ8TC17 118 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms