RNA–Protein interactions for RNA: ENST00000345165.8

CCDC78-202, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC78, Length 1,055 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-202ENST00000345165 NLRP10Q86W26 655 aa24.4■■□□□ 1.5
CCDC78-202ENST00000345165 TSPYL6Q8N831 410 aa24.4■■□□□ 1.5
CCDC78-202ENST00000345165 MYH16Q9H6N6 1097 aa24.4■■□□□ 1.5
CCDC78-202ENST00000345165 ELL2O00472 640 aaPredicted RBP24.39■■□□□ 1.49
CCDC78-202ENST00000345165 ALDH1B1P30837 517 aa24.39■■□□□ 1.49
CCDC78-202ENST00000345165 HOXA10P31260 410 aaPredicted RBP24.39■■□□□ 1.49
CCDC78-202ENST00000345165 GOLGA2Q08379 1002 aa24.39■■□□□ 1.49
CCDC78-202ENST00000345165 ERFEQ4G0M1 354 aa24.39■■□□□ 1.49
CCDC78-202ENST00000345165 NUTM1Q86Y26 1132 aa24.38■■□□□ 1.49
CCDC78-202ENST00000345165 ISCA1Q9BUE6 129 aa24.38■■□□□ 1.49
CCDC78-202ENST00000345165 STK31Q9BXU1 1019 aa24.38■■□□□ 1.49
CCDC78-202ENST00000345165 LAMB2P55268 1798 aa24.38■■□□□ 1.49
CCDC78-202ENST00000345165 DICER1Q9UPY3 1922 aaKnown RBP24.37■■□□□ 1.49
CCDC78-202ENST00000345165 FAM177BA6PVY3 158 aa24.37■■□□□ 1.49
CCDC78-202ENST00000345165 DDX58O95786 925 aaKnown RBP24.37■■□□□ 1.49
CCDC78-202ENST00000345165 C7orf43Q8WVR3 580 aa24.37■■□□□ 1.49
CCDC78-202ENST00000345165 SH3TC1Q8TE82 1336 aa24.35■■□□□ 1.49
CCDC78-202ENST00000345165 LMNB1P20700 586 aa24.35■■□□□ 1.49
CCDC78-202ENST00000345165 NFKBIEO00221 500 aa24.34■■□□□ 1.49
CCDC78-202ENST00000345165 GRIPAP1Q4V328 841 aa24.34■■□□□ 1.49
CCDC78-202ENST00000345165 C9orf131Q5VYM1 1079 aa24.34■■□□□ 1.49
CCDC78-202ENST00000345165 NLRP3Q96P20 1036 aa24.34■■□□□ 1.49
CCDC78-202ENST00000345165 CRAMP1Q96RY5 1269 aa24.34■■□□□ 1.49
CCDC78-202ENST00000345165 PHAXQ9H814 394 aaKnown RBP24.34■■□□□ 1.49
CCDC78-202ENST00000345165 DDX60Q8IY21 1712 aaKnown RBP24.34■■□□□ 1.49
CCDC78-202ENST00000345165 TIAM2Q8IVF5 1701 aa24.33■■□□□ 1.49
CCDC78-202ENST00000345165 CCDC88AQ3V6T2 1871 aa24.33■■□□□ 1.49
CCDC78-202ENST00000345165 C21orf2O43822 256 aa24.33■■□□□ 1.49
CCDC78-202ENST00000345165 CC2D2BQ6DHV5 1058 aa24.33■■□□□ 1.49
CCDC78-202ENST00000345165 RIC3Q7Z5B4 369 aa24.33■■□□□ 1.49
CCDC78-202ENST00000345165 CCDC93Q567U6 631 aa24.32■■□□□ 1.48
CCDC78-202ENST00000345165 RPGRQ92834 1020 aaKnown RBP24.32■■□□□ 1.48
CCDC78-202ENST00000345165 TRMT112Q9UI30 125 aaKnown RBP24.32■■□□□ 1.48
CCDC78-202ENST00000345165 SNED1Q8TER0 1413 aa24.32■■□□□ 1.48
CCDC78-202ENST00000345165 VAMP4O75379 141 aa24.31■■□□□ 1.48
CCDC78-202ENST00000345165 GPBP1L1Q9HC44 474 aaPredicted RBP24.31■■□□□ 1.48
CCDC78-202ENST00000345165 RNF181Q9P0P0 153 aa24.31■■□□□ 1.48
CCDC78-202ENST00000345165 SALL2Q9Y467 1007 aaPredicted RBP24.31■■□□□ 1.48
CCDC78-202ENST00000345165 SENP3-EIF4A1A0A087X0R7 540 aa24.3■■□□□ 1.48
CCDC78-202ENST00000345165 HSP90B1P14625 803 aaKnown RBP24.3■■□□□ 1.48
CCDC78-202ENST00000345165 KSR2Q6VAB6 950 aa24.3■■□□□ 1.48
CCDC78-202ENST00000345165 RTKN2Q8IZC4 609 aa24.3■■□□□ 1.48
CCDC78-202ENST00000345165 CCDC191Q8NCU4 936 aa24.3■■□□□ 1.48
CCDC78-202ENST00000345165 RBM17Q96I25 401 aaKnown RBP24.3■■□□□ 1.48
CCDC78-202ENST00000345165 METTL22Q9BUU2 404 aaPredicted RBP24.3■■□□□ 1.48
CCDC78-202ENST00000345165 TAOK3Q9H2K8 898 aa24.3■■□□□ 1.48
CCDC78-202ENST00000345165 SPINK5Q9NQ38 1064 aaPredicted RBP24.3■■□□□ 1.48
CCDC78-202ENST00000345165 RASSF7Q02833 373 aa24.29■■□□□ 1.48
CCDC78-202ENST00000345165 EXOSC9Q06265 439 aaKnown RBP24.29■■□□□ 1.48
CCDC78-202ENST00000345165 E9PSI1 815 aa24.27■■□□□ 1.48
CCDC78-202ENST00000345165 SLC4A2P04920 1241 aa24.27■■□□□ 1.48
CCDC78-202ENST00000345165 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
CCDC78-202ENST00000345165 ZBTB38Q8NAP3 1195 aaPredicted RBP24.27■■□□□ 1.48
CCDC78-202ENST00000345165 ATP5J2-PTCD1G3V325 749 aa24.25■■□□□ 1.47
CCDC78-202ENST00000345165 PRELPP51888 382 aa24.25■■□□□ 1.47
CCDC78-202ENST00000345165 FKBP4Q02790 459 aaKnown RBP eCLIP24.25■■□□□ 1.47
CCDC78-202ENST00000345165 C3orf67Q6ZVT6 689 aa24.25■■□□□ 1.47
CCDC78-202ENST00000345165 PSMD1Q99460 953 aa24.25■■□□□ 1.47
CCDC78-202ENST00000345165 KDM2BQ8NHM5 1336 aa24.25■■□□□ 1.47
CCDC78-202ENST00000345165 LRRC37AA6NMS7 1700 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 PI4KAP2A4QPH2 592 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 NEXNQ0ZGT2 675 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 FLIIQ13045 1269 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 SF3B3Q15393 1217 aaKnown RBP24.24■■□□□ 1.47
CCDC78-202ENST00000345165 TMC4Q7Z404 712 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 PI4KAP1Q8N8J0 262 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 ZNF428Q96B54 188 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 CWC25Q9NXE8 425 aaPredicted RBP24.24■■□□□ 1.47
CCDC78-202ENST00000345165 MAP3K2Q9Y2U5 619 aa24.24■■□□□ 1.47
CCDC78-202ENST00000345165 PCCAP05165 728 aaPredicted RBP24.23■■□□□ 1.47
CCDC78-202ENST00000345165 MYD88Q99836 296 aa24.23■■□□□ 1.47
CCDC78-202ENST00000345165 ABCC4O15439 1325 aa24.22■■□□□ 1.47
CCDC78-202ENST00000345165 BBOX1O75936 387 aa24.22■■□□□ 1.47
CCDC78-202ENST00000345165 HCLS1P14317 486 aaPredicted RBP24.22■■□□□ 1.47
CCDC78-202ENST00000345165 FAM89AQ96GI7 184 aa24.22■■□□□ 1.47
CCDC78-202ENST00000345165 CDHR2Q9BYE9 1310 aa24.21■■□□□ 1.47
CCDC78-202ENST00000345165 PPEF1O14829 653 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-202ENST00000345165 SYNE4Q8N205 404 aa24.21■■□□□ 1.47
CCDC78-202ENST00000345165 ZNF219Q9P2Y4 722 aaPredicted RBP24.21■■□□□ 1.47
CCDC78-202ENST00000345165 MYH3P11055 1940 aa24.2■■□□□ 1.46
CCDC78-202ENST00000345165 IRS4O14654 1257 aaPredicted RBP24.2■■□□□ 1.46
CCDC78-202ENST00000345165 SLFN5Q08AF3 891 aa24.2■■□□□ 1.46
CCDC78-202ENST00000345165 DDX46Q7L014 1031 aaKnown RBP24.2■■□□□ 1.46
CCDC78-202ENST00000345165 G2E3Q7L622 706 aa24.2■■□□□ 1.46
CCDC78-202ENST00000345165 ATP6V0A2Q9Y487 856 aa24.2■■□□□ 1.46
CCDC78-202ENST00000345165 WDR90Q96KV7 1748 aa24.19■■□□□ 1.46
CCDC78-202ENST00000345165 GLTPD2A6NH11 291 aa24.19■■□□□ 1.46
CCDC78-202ENST00000345165 IGKV5-2P06315 115 aa24.19■■□□□ 1.46
CCDC78-202ENST00000345165 GRAPQ13588 217 aa24.19■■□□□ 1.46
CCDC78-202ENST00000345165 GRAPLQ8TC17 118 aaPredicted RBP24.19■■□□□ 1.46
CCDC78-202ENST00000345165 VPS33BQ9H267 617 aa24.19■■□□□ 1.46
CCDC78-202ENST00000345165 KIF3CO14782 793 aa24.18■■□□□ 1.46
CCDC78-202ENST00000345165 C1QTNF8P60827 252 aa24.18■■□□□ 1.46
CCDC78-202ENST00000345165 FKBP5Q13451 457 aaPredicted RBP24.18■■□□□ 1.46
CCDC78-202ENST00000345165 TRMT2AQ8IZ69 625 aaKnown RBP24.18■■□□□ 1.46
CCDC78-202ENST00000345165 TMX4Q9H1E5 349 aaPredicted RBP24.18■■□□□ 1.46
CCDC78-202ENST00000345165 CT47B1P0C2W7 299 aaPredicted RBP24.17■■□□□ 1.46
CCDC78-202ENST00000345165 SP8Q8IXZ3 490 aa24.17■■□□□ 1.46
CCDC78-202ENST00000345165 LINS1Q8NG48 757 aa24.17■■□□□ 1.46
CCDC78-202ENST00000345165 ZNF526Q8TF50 670 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms