RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 ZNF496Q96IT1 587 aaPredicted RBP22.93■■□□□ 1.26
LYSMD4-202ENST00000344791 F13A1P00488 732 aa22.92■■□□□ 1.26
LYSMD4-202ENST00000344791 CREB3L3Q68CJ9 461 aa22.92■■□□□ 1.26
LYSMD4-202ENST00000344791 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.92■■□□□ 1.26
LYSMD4-202ENST00000344791 KDM3BQ7LBC6 1761 aa22.92■■□□□ 1.26
LYSMD4-202ENST00000344791 ERBB3P21860 1342 aa22.92■■□□□ 1.26
LYSMD4-202ENST00000344791 R3HCC1Q9Y3T6 440 aaKnown RBP22.91■■□□□ 1.26
LYSMD4-202ENST00000344791 USP42Q9H9J4 1324 aaKnown RBP22.91■■□□□ 1.26
LYSMD4-202ENST00000344791 HCLS1P14317 486 aaPredicted RBP22.91■■□□□ 1.26
LYSMD4-202ENST00000344791 IL17RAQ96F46 866 aa22.91■■□□□ 1.26
LYSMD4-202ENST00000344791 USP25Q9UHP3 1055 aa22.91■■□□□ 1.26
LYSMD4-202ENST00000344791 TPCN1Q9ULQ1 816 aa22.91■■□□□ 1.26
LYSMD4-202ENST00000344791 UBE3BQ7Z3V4 1068 aa22.9■■□□□ 1.26
LYSMD4-202ENST00000344791 ZNF589Q86UQ0 364 aaPredicted RBP22.9■■□□□ 1.26
LYSMD4-202ENST00000344791 ZNF830Q96NB3 372 aaPredicted RBP22.9■■□□□ 1.26
LYSMD4-202ENST00000344791 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.26
LYSMD4-202ENST00000344791 NEURL1BA8MQ27 555 aa22.89■■□□□ 1.26
LYSMD4-202ENST00000344791 ST3GAL1Q11201 340 aa22.89■■□□□ 1.26
LYSMD4-202ENST00000344791 NECTIN1Q15223 517 aa22.89■■□□□ 1.26
LYSMD4-202ENST00000344791 GIMAP6Q6P9H5 292 aa22.89■■□□□ 1.26
LYSMD4-202ENST00000344791 NOL7Q9UMY1 257 aaKnown RBP22.89■■□□□ 1.26
LYSMD4-202ENST00000344791 N4BP2Q86UW6 1770 aaPredicted RBP22.89■■□□□ 1.25
LYSMD4-202ENST00000344791 DNAJC2Q99543 621 aaKnown RBP22.89■■□□□ 1.25
LYSMD4-202ENST00000344791 EPB41L2O43491 1005 aaKnown RBP22.88■■□□□ 1.25
LYSMD4-202ENST00000344791 VPS53Q5VIR6 699 aa22.88■■□□□ 1.25
LYSMD4-202ENST00000344791 LARP1Q6PKG0 1096 aaKnown RBP22.88■■□□□ 1.25
LYSMD4-202ENST00000344791 SLC52A2Q9HAB3 445 aa22.88■■□□□ 1.25
LYSMD4-202ENST00000344791 ZSWIM6Q9HCJ5 1215 aa22.88■■□□□ 1.25
LYSMD4-202ENST00000344791 GCKRQ14397 625 aa22.88■■□□□ 1.25
LYSMD4-202ENST00000344791 SLC27A2O14975 620 aa22.87■■□□□ 1.25
LYSMD4-202ENST00000344791 TTC5Q8N0Z6 440 aa22.87■■□□□ 1.25
LYSMD4-202ENST00000344791 NPHP3Q7Z494 1330 aa22.87■■□□□ 1.25
LYSMD4-202ENST00000344791 MTMR6Q9Y217 621 aa22.87■■□□□ 1.25
LYSMD4-202ENST00000344791 PHF14O94880 888 aa22.87■■□□□ 1.25
LYSMD4-202ENST00000344791 TATP17735 454 aaPredicted RBP22.87■■□□□ 1.25
LYSMD4-202ENST00000344791 CCDC129Q6ZRS4 1044 aa22.87■■□□□ 1.25
LYSMD4-202ENST00000344791 HDAC5Q9UQL6 1122 aa22.86■■□□□ 1.25
LYSMD4-202ENST00000344791 TFCP2Q12800 502 aa22.86■■□□□ 1.25
LYSMD4-202ENST00000344791 LARP1BQ659C4 914 aaKnown RBP22.86■■□□□ 1.25
LYSMD4-202ENST00000344791 ANKRD13DQ6ZTN6 518 aa22.86■■□□□ 1.25
LYSMD4-202ENST00000344791 ZKSCAN5Q9Y2L8 839 aa22.86■■□□□ 1.25
LYSMD4-202ENST00000344791 LMO7Q8WWI1 1683 aa22.85■■□□□ 1.25
LYSMD4-202ENST00000344791 CCDC183Q5T5S1 534 aa22.85■■□□□ 1.25
LYSMD4-202ENST00000344791 SEC62Q99442 399 aaKnown RBP22.85■■□□□ 1.25
LYSMD4-202ENST00000344791 HEG1Q9ULI3 1381 aa22.85■■□□□ 1.25
LYSMD4-202ENST00000344791 PHKG2P15735 406 aa22.85■■□□□ 1.25
LYSMD4-202ENST00000344791 MAP4K1Q92918 833 aa22.85■■□□□ 1.25
LYSMD4-202ENST00000344791 UBE2HP62256 183 aa22.84■■□□□ 1.25
LYSMD4-202ENST00000344791 SLFNL1Q499Z3 407 aa22.84■■□□□ 1.25
LYSMD4-202ENST00000344791 USP54Q70EL1 1684 aa22.84■■□□□ 1.25
LYSMD4-202ENST00000344791 CDC37L1Q7L3B6 337 aa22.84■■□□□ 1.25
LYSMD4-202ENST00000344791 PRKCSHP14314 528 aaPredicted RBP22.84■■□□□ 1.25
LYSMD4-202ENST00000344791 HSP90AA2PQ14568 343 aaPredicted RBP22.84■■□□□ 1.25
LYSMD4-202ENST00000344791 BLOC1S2Q6QNY1 142 aa22.84■■□□□ 1.25
LYSMD4-202ENST00000344791 PPFIA3O75145 1194 aa22.83■■□□□ 1.25
LYSMD4-202ENST00000344791 OFD1O75665 1012 aa22.83■■□□□ 1.25
LYSMD4-202ENST00000344791 LRRC2Q9BYS8 371 aa22.83■■□□□ 1.25
LYSMD4-202ENST00000344791 CCDC39Q9UFE4 941 aa22.83■■□□□ 1.25
LYSMD4-202ENST00000344791 DBNLQ9UJU6 430 aaKnown RBP22.83■■□□□ 1.25
LYSMD4-202ENST00000344791 ATP6V1DQ9Y5K8 247 aa22.83■■□□□ 1.25
LYSMD4-202ENST00000344791 NCAPD2Q15021 1401 aa22.83■■□□□ 1.24
LYSMD4-202ENST00000344791 A0A087WZG4 1122 aa22.83■■□□□ 1.24
LYSMD4-202ENST00000344791 RBM10P98175 930 aaKnown RBP22.83■■□□□ 1.24
LYSMD4-202ENST00000344791 CAMK4Q16566 473 aa22.83■■□□□ 1.24
LYSMD4-202ENST00000344791 DDX46Q7L014 1031 aaKnown RBP22.83■■□□□ 1.24
LYSMD4-202ENST00000344791 METTL22Q9BUU2 404 aaPredicted RBP22.83■■□□□ 1.24
LYSMD4-202ENST00000344791 NPHP4O75161 1426 aaPredicted RBP22.82■■□□□ 1.24
LYSMD4-202ENST00000344791 FOSBP53539 338 aa22.82■■□□□ 1.24
LYSMD4-202ENST00000344791 TFIP11Q9UBB9 837 aaKnown RBP22.82■■□□□ 1.24
LYSMD4-202ENST00000344791 KDM6AO15550 1401 aaPredicted RBP22.82■■□□□ 1.24
LYSMD4-202ENST00000344791 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.81■■□□□ 1.24
LYSMD4-202ENST00000344791 RGPD5Q99666 1765 aa22.81■■□□□ 1.24
LYSMD4-202ENST00000344791 ZSCAN31Q96LW9 406 aaPredicted RBP22.81■■□□□ 1.24
LYSMD4-202ENST00000344791 DBNDD2Q9BQY9 259 aa22.81■■□□□ 1.24
LYSMD4-202ENST00000344791 SH2B1Q9NRF2 756 aaPredicted RBP22.81■■□□□ 1.24
LYSMD4-202ENST00000344791 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.8■■□□□ 1.24
LYSMD4-202ENST00000344791 CYP27B1O15528 508 aa22.8■■□□□ 1.24
LYSMD4-202ENST00000344791 HS1BP3Q53T59 392 aa22.8■■□□□ 1.24
LYSMD4-202ENST00000344791 NEUROD6Q96NK8 337 aa22.8■■□□□ 1.24
LYSMD4-202ENST00000344791 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.8■■□□□ 1.24
LYSMD4-202ENST00000344791 IFNL2Q8IZJ0 200 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 C17orf53Q8N3J3 647 aaPredicted RBP22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 TM6SF1Q9BZW5 370 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 ZNF330Q9Y3S2 320 aaPredicted RBP22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 ADCY5O95622 1261 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 PSMA5P28066 241 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 RNF20Q5VTR2 975 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 TMEM87AQ8NBN3 555 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 UTYO14607 1347 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 HIP1O00291 1037 aa22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 PTPN12Q05209 780 aaKnown RBP22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 TTC12Q9H892 705 aaPredicted RBP22.79■■□□□ 1.24
LYSMD4-202ENST00000344791 SNRPA1P09661 255 aaKnown RBP22.78■■□□□ 1.24
LYSMD4-202ENST00000344791 HSP90B1P14625 803 aaKnown RBP22.78■■□□□ 1.24
LYSMD4-202ENST00000344791 CABP4P57796 275 aa22.78■■□□□ 1.24
LYSMD4-202ENST00000344791 TNNI3KQ59H18 835 aa22.78■■□□□ 1.24
LYSMD4-202ENST00000344791 DDX11Q96FC9 970 aa22.78■■□□□ 1.24
LYSMD4-202ENST00000344791 ARID3AQ99856 593 aa22.78■■□□□ 1.24
LYSMD4-202ENST00000344791 FPGT-TNNI3KV9GXZ4 949 aa22.78■■□□□ 1.24
LYSMD4-202ENST00000344791 ATF3P18847 181 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms