RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 BICC1Q9H694 974 aaKnown RBP9.26□□□□□ -0.93
GDNF-202ENST00000344622 ABCC12Q96J65 1359 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 UTYO14607 1347 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 STARD3NLO95772 234 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 OTUD7AQ8TE49 926 aaPredicted RBP9.26□□□□□ -0.93
GDNF-202ENST00000344622 CCDC85AQ96PX6 553 aaPredicted RBP9.26□□□□□ -0.93
GDNF-202ENST00000344622 ARXQ96QS3 562 aa9.26□□□□□ -0.93
GDNF-202ENST00000344622 PA2G4Q9UQ80 394 aaKnown RBP9.26□□□□□ -0.93
GDNF-202ENST00000344622 QSER1Q2KHR3 1735 aa9.25□□□□□ -0.93
GDNF-202ENST00000344622 NRXN2Q9P2S2 1712 aa9.25□□□□□ -0.93
GDNF-202ENST00000344622 GIGYF2Q6Y7W6 1299 aaKnown RBP9.25□□□□□ -0.93
GDNF-202ENST00000344622 NLRP10Q86W26 655 aa9.25□□□□□ -0.93
GDNF-202ENST00000344622 C16orf71Q8IYS4 520 aaPredicted RBP9.25□□□□□ -0.93
GDNF-202ENST00000344622 ZNF34Q8IZ26 560 aa9.25□□□□□ -0.93
GDNF-202ENST00000344622 MYO5AQ9Y4I1 1855 aaKnown RBP9.25□□□□□ -0.93
GDNF-202ENST00000344622 GYS1P13807 737 aa9.25□□□□□ -0.93
GDNF-202ENST00000344622 PDE4AP27815 886 aa9.25□□□□□ -0.93
GDNF-202ENST00000344622 UBE3BQ7Z3V4 1068 aa9.25□□□□□ -0.93
GDNF-202ENST00000344622 UPF1Q92900 1129 aaKnown RBP eCLIP9.25□□□□□ -0.93
GDNF-202ENST00000344622 RPS6KA4O75676 772 aa9.24□□□□□ -0.93
GDNF-202ENST00000344622 DDR1Q08345 913 aa9.24□□□□□ -0.93
GDNF-202ENST00000344622 TCIRG1Q13488 830 aa9.24□□□□□ -0.93
GDNF-202ENST00000344622 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
GDNF-202ENST00000344622 API5Q9BZZ5 524 aaKnown RBP9.24□□□□□ -0.93
GDNF-202ENST00000344622 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
GDNF-202ENST00000344622 SMARCA5O60264 1052 aaPredicted RBP9.24□□□□□ -0.93
GDNF-202ENST00000344622 LINS1Q8NG48 757 aa9.24□□□□□ -0.93
GDNF-202ENST00000344622 SRCIN1Q9C0H9 1055 aa9.24□□□□□ -0.93
GDNF-202ENST00000344622 H7C1W4 665 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 NTSR2O95665 410 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 RFX5P48382 616 aaPredicted RBP9.23□□□□□ -0.93
GDNF-202ENST00000344622 MSL1Q68DK7 614 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 SMARCC1Q92922 1105 aaPredicted RBP9.23□□□□□ -0.93
GDNF-202ENST00000344622 ZNF594Q96JF6 807 aaPredicted RBP9.23□□□□□ -0.93
GDNF-202ENST00000344622 DDX19BQ9UMR2 479 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 KIAA1551Q9HCM1 1747 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 SNAP23O00161 211 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 GRM8O00222 908 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 IPO8O15397 1037 aaKnown RBP9.23□□□□□ -0.93
GDNF-202ENST00000344622 MKI67P46013 3256 aaKnown RBP9.23□□□□□ -0.93
GDNF-202ENST00000344622 A0A087WZG4 1122 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
GDNF-202ENST00000344622 TSHZ3Q63HK5 1081 aa9.23□□□□□ -0.93
GDNF-202ENST00000344622 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
GDNF-202ENST00000344622 EXOC6BQ9Y2D4 811 aa9.22□□□□□ -0.93
GDNF-202ENST00000344622 PPP1R42Q7Z4L9 355 aa9.22□□□□□ -0.93
GDNF-202ENST00000344622 NFIXQ14938 502 aa9.21□□□□□ -0.93
GDNF-202ENST00000344622 PUS3Q9BZE2 481 aaKnown RBP9.21□□□□□ -0.93
GDNF-202ENST00000344622 CCT4P50991 539 aaKnown RBP9.21□□□□□ -0.93
GDNF-202ENST00000344622 ERFEQ4G0M1 354 aa9.21□□□□□ -0.93
GDNF-202ENST00000344622 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.93
GDNF-202ENST00000344622 NARFQ9UHQ1 456 aa9.21□□□□□ -0.93
GDNF-202ENST00000344622 DNAH12Q6ZR08 3092 aa9.21□□□□□ -0.94
GDNF-202ENST00000344622 SLC27A3Q5K4L6 730 aa9.21□□□□□ -0.94
GDNF-202ENST00000344622 SEC31BQ9NQW1 1179 aa9.21□□□□□ -0.94
GDNF-202ENST00000344622 APBB1O00213 710 aa9.2□□□□□ -0.94
GDNF-202ENST00000344622 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.2□□□□□ -0.94
GDNF-202ENST00000344622 TM4SF1P30408 202 aa9.2□□□□□ -0.94
GDNF-202ENST00000344622 RGS3P49796 1198 aa9.2□□□□□ -0.94
GDNF-202ENST00000344622 POLA2Q14181 598 aa9.2□□□□□ -0.94
GDNF-202ENST00000344622 GREM2Q9H772 168 aa9.2□□□□□ -0.94
GDNF-202ENST00000344622 NIP7Q9Y221 180 aaKnown RBP eCLIP9.2□□□□□ -0.94
GDNF-202ENST00000344622 RTCBQ9Y3I0 505 aaKnown RBP9.2□□□□□ -0.94
GDNF-202ENST00000344622 PTPN12Q05209 780 aaKnown RBP9.2□□□□□ -0.94
GDNF-202ENST00000344622 OLFM4Q6UX06 510 aa9.2□□□□□ -0.94
GDNF-202ENST00000344622 ERVV-1B6SEH8 477 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 SASH1O94885 1247 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 CHGBP05060 677 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 SLC15A2Q16348 729 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 FAM161AQ3B820 660 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 RABL6Q3YEC7 729 aaPredicted RBP9.19□□□□□ -0.94
GDNF-202ENST00000344622 LRRC24Q50LG9 513 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 TLR7Q9NYK1 1049 aaKnown RBP9.19□□□□□ -0.94
GDNF-202ENST00000344622 LRP5O75197 1615 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 HTTP42858 3142 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 TFCP2L1Q9NZI6 479 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 POLRMTO00411 1230 aaKnown RBP9.19□□□□□ -0.94
GDNF-202ENST00000344622 HDAC1Q13547 482 aaPredicted RBP9.19□□□□□ -0.94
GDNF-202ENST00000344622 SMC5Q8IY18 1101 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 SSH3Q8TE77 659 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 AK7Q96M32 723 aa9.19□□□□□ -0.94
GDNF-202ENST00000344622 CHD4Q14839 1912 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 TRIM28Q13263 835 aaKnown RBP9.18□□□□□ -0.94
GDNF-202ENST00000344622 TRAPPC3LQ5T215 181 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 LMBR1LQ6UX01 489 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 SIL1Q9H173 461 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 LTBP1Q14766 1721 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 BRCA1P38398 1863 aaKnown RBP9.18□□□□□ -0.94
GDNF-202ENST00000344622 PSDA5PKW4 1024 aaPredicted RBP9.18□□□□□ -0.94
GDNF-202ENST00000344622 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
GDNF-202ENST00000344622 ATG9AQ7Z3C6 839 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 ZBTB38Q8NAP3 1195 aaPredicted RBP9.18□□□□□ -0.94
GDNF-202ENST00000344622 CCDC191Q8NCU4 936 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 CWC25Q9NXE8 425 aaPredicted RBP9.18□□□□□ -0.94
GDNF-202ENST00000344622 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 AKAP11Q9UKA4 1901 aa9.18□□□□□ -0.94
GDNF-202ENST00000344622 SLX4Q8IY92 1834 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms