RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 ZNF652Q9Y2D9 606 aa17.2■□□□□ 0.34
MS4A4A-202ENST00000343968 PNMA6EA0A0J9YXQ4 647 aa17.19■□□□□ 0.34
MS4A4A-202ENST00000343968 ZBTB38Q8NAP3 1195 aaPredicted RBP17.19■□□□□ 0.34
MS4A4A-202ENST00000343968 AK7Q96M32 723 aa17.19■□□□□ 0.34
MS4A4A-202ENST00000343968 ARXQ96QS3 562 aa17.19■□□□□ 0.34
MS4A4A-202ENST00000343968 CDHR2Q9BYE9 1310 aa17.18■□□□□ 0.34
MS4A4A-202ENST00000343968 PARP10Q53GL7 1025 aa17.18■□□□□ 0.34
MS4A4A-202ENST00000343968 PPP1R42Q7Z4L9 355 aa17.18■□□□□ 0.34
MS4A4A-202ENST00000343968 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
MS4A4A-202ENST00000343968 C4AP0C0L4 1744 aa17.18■□□□□ 0.34
MS4A4A-202ENST00000343968 NUCB1Q02818 461 aa17.17■□□□□ 0.34
MS4A4A-202ENST00000343968 UBE3BQ7Z3V4 1068 aa17.17■□□□□ 0.34
MS4A4A-202ENST00000343968 BICC1Q9H694 974 aaKnown RBP17.17■□□□□ 0.34
MS4A4A-202ENST00000343968 PDZRN3Q9UPQ7 1066 aa17.17■□□□□ 0.34
MS4A4A-202ENST00000343968 SSFA2P28290 1259 aa17.16■□□□□ 0.34
MS4A4A-202ENST00000343968 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
MS4A4A-202ENST00000343968 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
MS4A4A-202ENST00000343968 UBN2Q6ZU65 1347 aa17.16■□□□□ 0.34
MS4A4A-202ENST00000343968 AMIGO3Q86WK7 504 aa17.16■□□□□ 0.34
MS4A4A-202ENST00000343968 BCL2L12Q9HB09 334 aa17.16■□□□□ 0.34
MS4A4A-202ENST00000343968 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
MS4A4A-202ENST00000343968 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
MS4A4A-202ENST00000343968 NOP58Q9Y2X3 529 aaKnown RBP17.15■□□□□ 0.34
MS4A4A-202ENST00000343968 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
MS4A4A-202ENST00000343968 GPTP24298 496 aa17.14■□□□□ 0.33
MS4A4A-202ENST00000343968 FOXO4P98177 505 aa17.14■□□□□ 0.33
MS4A4A-202ENST00000343968 EPHA10Q5JZY3 1008 aa17.14■□□□□ 0.33
MS4A4A-202ENST00000343968 CAMKK2Q96RR4 588 aa17.14■□□□□ 0.33
MS4A4A-202ENST00000343968 ZPR1O75312 459 aa17.13■□□□□ 0.33
MS4A4A-202ENST00000343968 CHD1LQ86WJ1 897 aa17.13■□□□□ 0.33
MS4A4A-202ENST00000343968 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
MS4A4A-202ENST00000343968 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
MS4A4A-202ENST00000343968 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
MS4A4A-202ENST00000343968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.12■□□□□ 0.33
MS4A4A-202ENST00000343968 RAB11FIP3O75154 756 aa17.12■□□□□ 0.33
MS4A4A-202ENST00000343968 RFC4P35249 363 aa17.12■□□□□ 0.33
MS4A4A-202ENST00000343968 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
MS4A4A-202ENST00000343968 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
MS4A4A-202ENST00000343968 UTP14AQ9BVJ6 771 aaKnown RBP17.12■□□□□ 0.33
MS4A4A-202ENST00000343968 NTSR2O95665 410 aa17.11■□□□□ 0.33
MS4A4A-202ENST00000343968 CSF1RP07333 972 aa17.11■□□□□ 0.33
MS4A4A-202ENST00000343968 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
MS4A4A-202ENST00000343968 FAM89AQ96GI7 184 aa17.11■□□□□ 0.33
MS4A4A-202ENST00000343968 TRMT112Q9UI30 125 aaKnown RBP17.11■□□□□ 0.33
MS4A4A-202ENST00000343968 MSH5O43196 834 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 RFX5P48382 616 aaPredicted RBP17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 SMIM5Q71RC9 77 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 CCDC125Q86Z20 511 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 FLAD1Q8NFF5 587 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 COPRSQ9NQ92 184 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 LAMB2P55268 1798 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 TBC1D9BQ66K14 1250 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 LMBR1LQ6UX01 489 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
MS4A4A-202ENST00000343968 MYH3P11055 1940 aa17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 PDE8AO60658 829 aa17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 PDE4AP27815 886 aa17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 BAG6P46379 1132 aa17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 SF3B2Q13435 895 aaKnown RBP17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 QSER1Q2KHR3 1735 aa17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 TUBGCP6Q96RT7 1819 aa17.09■□□□□ 0.33
MS4A4A-202ENST00000343968 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
MS4A4A-202ENST00000343968 PHF14O94880 888 aa17.08■□□□□ 0.32
MS4A4A-202ENST00000343968 EZH2Q15910 746 aaKnown RBP17.08■□□□□ 0.32
MS4A4A-202ENST00000343968 SKAP1Q86WV1 359 aa17.08■□□□□ 0.32
MS4A4A-202ENST00000343968 PTPN12Q05209 780 aaKnown RBP17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 RTL5Q5HYW3 569 aaPredicted RBP17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 SETDB2Q96T68 719 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 LNPKQ9C0E8 428 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 NYXQ9GZU5 481 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 DDX60Q8IY21 1712 aaKnown RBP17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 GYS1P13807 737 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 ERC1Q8IUD2 1116 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 SYNE4Q8N205 404 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
MS4A4A-202ENST00000343968 CTSWP56202 376 aa17.06■□□□□ 0.32
MS4A4A-202ENST00000343968 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
MS4A4A-202ENST00000343968 RTL9Q8NET4 1388 aa17.05■□□□□ 0.32
MS4A4A-202ENST00000343968 RGS3P49796 1198 aa17.05■□□□□ 0.32
MS4A4A-202ENST00000343968 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
MS4A4A-202ENST00000343968 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
MS4A4A-202ENST00000343968 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
MS4A4A-202ENST00000343968 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
MS4A4A-202ENST00000343968 TM4SF1P30408 202 aa17.04■□□□□ 0.32
MS4A4A-202ENST00000343968 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
MS4A4A-202ENST00000343968 NFIXQ14938 502 aa17.04■□□□□ 0.32
MS4A4A-202ENST00000343968 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
MS4A4A-202ENST00000343968 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms