RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 ISCA1Q9BUE6 129 aa12.1□□□□□ -0.47
CLDN18-202ENST00000343735 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
CLDN18-202ENST00000343735 CCDC125Q86Z20 511 aa12.1□□□□□ -0.47
CLDN18-202ENST00000343735 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
CLDN18-202ENST00000343735 GNPATO15228 680 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 ZPR1O75312 459 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 TRAPPC3LQ5T215 181 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 TBC1D2BQ9UPU7 963 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 NUP188Q5SRE5 1749 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 CEP85Q6P2H3 762 aa12.09□□□□□ -0.47
CLDN18-202ENST00000343735 GZF1Q9H116 711 aaPredicted RBP12.09□□□□□ -0.47
CLDN18-202ENST00000343735 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
CLDN18-202ENST00000343735 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
CLDN18-202ENST00000343735 ATP5J2-PTCD1G3V325 749 aa12.08□□□□□ -0.48
CLDN18-202ENST00000343735 SSFA2P28290 1259 aa12.08□□□□□ -0.48
CLDN18-202ENST00000343735 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
CLDN18-202ENST00000343735 NARFQ9UHQ1 456 aa12.08□□□□□ -0.48
CLDN18-202ENST00000343735 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
CLDN18-202ENST00000343735 C4BP0C0L5 1744 aa12.08□□□□□ -0.48
CLDN18-202ENST00000343735 CAMTA2O94983 1202 aa12.08□□□□□ -0.48
CLDN18-202ENST00000343735 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.48
CLDN18-202ENST00000343735 H7C1W4 665 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 RFC4P35249 363 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 BAG6P46379 1132 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 KCNQ4P56696 695 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 PCCAP05165 728 aaPredicted RBP12.07□□□□□ -0.48
CLDN18-202ENST00000343735 MTX1Q13505 466 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 ZNF34Q8IZ26 560 aa12.07□□□□□ -0.48
CLDN18-202ENST00000343735 DTNBO60941 627 aa12.06□□□□□ -0.48
CLDN18-202ENST00000343735 HLFQ16534 295 aa12.06□□□□□ -0.48
CLDN18-202ENST00000343735 ZBTB38Q8NAP3 1195 aaPredicted RBP12.06□□□□□ -0.48
CLDN18-202ENST00000343735 FAM161AQ3B820 660 aa12.06□□□□□ -0.48
CLDN18-202ENST00000343735 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
CLDN18-202ENST00000343735 SMC5Q8IY18 1101 aa12.06□□□□□ -0.48
CLDN18-202ENST00000343735 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
CLDN18-202ENST00000343735 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
CLDN18-202ENST00000343735 UBE3BQ7Z3V4 1068 aa12.05□□□□□ -0.48
CLDN18-202ENST00000343735 DCTPP1Q9H773 170 aa12.05□□□□□ -0.48
CLDN18-202ENST00000343735 CDHR2Q9BYE9 1310 aa12.05□□□□□ -0.48
CLDN18-202ENST00000343735 PROM2Q8N271 834 aa12.05□□□□□ -0.48
CLDN18-202ENST00000343735 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
CLDN18-202ENST00000343735 AFDNP55196 1824 aaKnown RBP12.04□□□□□ -0.48
CLDN18-202ENST00000343735 TNS1Q9HBL0 1735 aaKnown RBP12.04□□□□□ -0.48
CLDN18-202ENST00000343735 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 SSH3Q8TE77 659 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 UTP14AQ9BVJ6 771 aaKnown RBP12.04□□□□□ -0.48
CLDN18-202ENST00000343735 FRAT2O75474 233 aaPredicted RBP12.04□□□□□ -0.48
CLDN18-202ENST00000343735 C8orf34Q49A92 452 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
CLDN18-202ENST00000343735 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
CLDN18-202ENST00000343735 NIP7Q9Y221 180 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLDN18-202ENST00000343735 SRGAP3O43295 1099 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 GSE1Q14687 1217 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 SUCLG2Q96I99 432 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 PLA2G12BQ9BX93 195 aa12.04□□□□□ -0.48
CLDN18-202ENST00000343735 USP42Q9H9J4 1324 aaKnown RBP12.03□□□□□ -0.48
CLDN18-202ENST00000343735 TFCP2L1Q9NZI6 479 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 ANKRD36CQ5JPF3 1778 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.03□□□□□ -0.48
CLDN18-202ENST00000343735 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 GPTP24298 496 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 CASP7P55210 303 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 POLA2Q14181 598 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 NFKBIBQ15653 356 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 CAMKK2Q96RR4 588 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 SETDB2Q96T68 719 aa12.03□□□□□ -0.48
CLDN18-202ENST00000343735 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.48
CLDN18-202ENST00000343735 RABL6Q3YEC7 729 aaPredicted RBP12.02□□□□□ -0.48
CLDN18-202ENST00000343735 BICC1Q9H694 974 aaKnown RBP12.02□□□□□ -0.48
CLDN18-202ENST00000343735 NUP98P52948 1817 aa12.02□□□□□ -0.48
CLDN18-202ENST00000343735 SH3TC1Q8TE82 1336 aa12.02□□□□□ -0.48
CLDN18-202ENST00000343735 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
CLDN18-202ENST00000343735 BCORQ6W2J9 1755 aa12.02□□□□□ -0.49
CLDN18-202ENST00000343735 PHF14O94880 888 aa12.02□□□□□ -0.49
CLDN18-202ENST00000343735 ERC1Q8IUD2 1116 aa12.02□□□□□ -0.49
CLDN18-202ENST00000343735 FOXD4L5Q5VV16 416 aaPredicted RBP12.01□□□□□ -0.49
CLDN18-202ENST00000343735 FOXD4L4Q8WXT5 416 aaPredicted RBP12.01□□□□□ -0.49
CLDN18-202ENST00000343735 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
CLDN18-202ENST00000343735 NUCB1Q02818 461 aa12.01□□□□□ -0.49
CLDN18-202ENST00000343735 SCN7AQ01118 1682 aa12.01□□□□□ -0.49
CLDN18-202ENST00000343735 PNMA6EA0A0J9YXQ4 647 aa12.01□□□□□ -0.49
CLDN18-202ENST00000343735 PDE8AO60658 829 aa12.01□□□□□ -0.49
CLDN18-202ENST00000343735 IRS4O14654 1257 aaPredicted RBP12□□□□□ -0.49
CLDN18-202ENST00000343735 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
CLDN18-202ENST00000343735 TPTE2Q6XPS3 522 aa12□□□□□ -0.49
CLDN18-202ENST00000343735 C16orf71Q8IYS4 520 aaPredicted RBP12□□□□□ -0.49
CLDN18-202ENST00000343735 FAM89AQ96GI7 184 aa12□□□□□ -0.49
CLDN18-202ENST00000343735 GTF2E1P29083 439 aaPredicted RBP12□□□□□ -0.49
CLDN18-202ENST00000343735 SUSD4Q5VX71 490 aa12□□□□□ -0.49
CLDN18-202ENST00000343735 CHD1LQ86WJ1 897 aa12□□□□□ -0.49
CLDN18-202ENST00000343735 KAZALD1Q96I82 304 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms