RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SEPT12Q8IYM1 358 aa22.7■■□□□ 1.23
HOXA9-201ENST00000343483 TTC41PQ6P2S7 1318 aa22.7■■□□□ 1.22
HOXA9-201ENST00000343483 SASH1O94885 1247 aa22.7■■□□□ 1.22
HOXA9-201ENST00000343483 CWC25Q9NXE8 425 aaPredicted RBP22.7■■□□□ 1.22
HOXA9-201ENST00000343483 BRWD3Q6RI45 1802 aa22.7■■□□□ 1.22
HOXA9-201ENST00000343483 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
HOXA9-201ENST00000343483 STARD3NLO95772 234 aa22.69■■□□□ 1.22
HOXA9-201ENST00000343483 GPATCH3Q96I76 525 aa22.69■■□□□ 1.22
HOXA9-201ENST00000343483 CD2BP2O95400 341 aaKnown RBP22.69■■□□□ 1.22
HOXA9-201ENST00000343483 CASP7P55210 303 aa22.69■■□□□ 1.22
HOXA9-201ENST00000343483 CDCA7Q9BWT1 371 aaPredicted RBP22.69■■□□□ 1.22
HOXA9-201ENST00000343483 GLRX3O76003 335 aaKnown RBP22.68■■□□□ 1.22
HOXA9-201ENST00000343483 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
HOXA9-201ENST00000343483 ECHDC1Q9NTX5 307 aa22.68■■□□□ 1.22
HOXA9-201ENST00000343483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.68■■□□□ 1.22
HOXA9-201ENST00000343483 COL15A1P39059 1388 aa22.68■■□□□ 1.22
HOXA9-201ENST00000343483 DDB1Q16531 1140 aa22.67■■□□□ 1.22
HOXA9-201ENST00000343483 RABL6Q3YEC7 729 aaPredicted RBP22.67■■□□□ 1.22
HOXA9-201ENST00000343483 CNTROBQ8N137 903 aa22.67■■□□□ 1.22
HOXA9-201ENST00000343483 THRAP3Q9Y2W1 955 aaKnown RBP22.67■■□□□ 1.22
HOXA9-201ENST00000343483 PRIM1P49642 420 aaKnown RBP22.67■■□□□ 1.22
HOXA9-201ENST00000343483 RABEP1Q15276 862 aa22.67■■□□□ 1.22
HOXA9-201ENST00000343483 H7C1W4 665 aa22.66■■□□□ 1.22
HOXA9-201ENST00000343483 ONECUT3O60422 494 aaPredicted RBP22.66■■□□□ 1.22
HOXA9-201ENST00000343483 ARXQ96QS3 562 aa22.66■■□□□ 1.22
HOXA9-201ENST00000343483 NUP188Q5SRE5 1749 aa22.66■■□□□ 1.22
HOXA9-201ENST00000343483 ITGB4P16144 1822 aa22.66■■□□□ 1.22
HOXA9-201ENST00000343483 CCDC191Q8NCU4 936 aa22.66■■□□□ 1.22
HOXA9-201ENST00000343483 EAF2Q96CJ1 260 aaPredicted RBP22.66■■□□□ 1.22
HOXA9-201ENST00000343483 ANO2Q9NQ90 1003 aa22.66■■□□□ 1.22
HOXA9-201ENST00000343483 COPRSQ9NQ92 184 aa22.66■■□□□ 1.22
HOXA9-201ENST00000343483 RFX5P48382 616 aaPredicted RBP22.65■■□□□ 1.22
HOXA9-201ENST00000343483 LMBR1LQ6UX01 489 aa22.65■■□□□ 1.22
HOXA9-201ENST00000343483 KIF6Q6ZMV9 814 aa22.65■■□□□ 1.22
HOXA9-201ENST00000343483 CHMP3Q9Y3E7 222 aa22.65■■□□□ 1.22
HOXA9-201ENST00000343483 WNK3Q9BYP7 1800 aa22.65■■□□□ 1.22
HOXA9-201ENST00000343483 PTPN12Q05209 780 aaKnown RBP22.64■■□□□ 1.22
HOXA9-201ENST00000343483 CCDC8Q9H0W5 538 aaPredicted RBP22.64■■□□□ 1.22
HOXA9-201ENST00000343483 SLC4A9Q96Q91 983 aa22.64■■□□□ 1.21
HOXA9-201ENST00000343483 K7ELQ4 463 aaPredicted RBP22.63■■□□□ 1.21
HOXA9-201ENST00000343483 FOXO4P98177 505 aa22.62■■□□□ 1.21
HOXA9-201ENST00000343483 TLR7Q9NYK1 1049 aaKnown RBP22.62■■□□□ 1.21
HOXA9-201ENST00000343483 THSD7AQ9UPZ6 1657 aa22.61■■□□□ 1.21
HOXA9-201ENST00000343483 HSP90AA1P07900 732 aaKnown RBP22.61■■□□□ 1.21
HOXA9-201ENST00000343483 CYP19A1P11511 503 aaPredicted RBP22.61■■□□□ 1.21
HOXA9-201ENST00000343483 DDIT3P35638 169 aa22.61■■□□□ 1.21
HOXA9-201ENST00000343483 TCIRG1Q13488 830 aa22.61■■□□□ 1.21
HOXA9-201ENST00000343483 MCM4P33991 863 aa22.61■■□□□ 1.21
HOXA9-201ENST00000343483 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
HOXA9-201ENST00000343483 IL25Q9H293 177 aa22.61■■□□□ 1.21
HOXA9-201ENST00000343483 MCCP23508 829 aa22.6■■□□□ 1.21
HOXA9-201ENST00000343483 ACSBG1Q96GR2 724 aa22.6■■□□□ 1.21
HOXA9-201ENST00000343483 ISCA1Q9BUE6 129 aa22.6■■□□□ 1.21
HOXA9-201ENST00000343483 TFCP2Q12800 502 aa22.59■■□□□ 1.21
HOXA9-201ENST00000343483 MARCH10Q8NA82 808 aaPredicted RBP22.59■■□□□ 1.21
HOXA9-201ENST00000343483 DOT1LQ8TEK3 1739 aa22.59■■□□□ 1.21
HOXA9-201ENST00000343483 KAT6BQ8WYB5 2073 aa22.59■■□□□ 1.21
HOXA9-201ENST00000343483 ZBTB1Q9Y2K1 713 aa22.58■■□□□ 1.21
HOXA9-201ENST00000343483 TJP1Q07157 1748 aa22.58■■□□□ 1.21
HOXA9-201ENST00000343483 CWC27Q6UX04 472 aaKnown RBP22.58■■□□□ 1.2
HOXA9-201ENST00000343483 DIAPH3Q9NSV4 1193 aa22.58■■□□□ 1.2
HOXA9-201ENST00000343483 FOXD4L1Q9NU39 408 aa22.58■■□□□ 1.2
HOXA9-201ENST00000343483 MAP3K15Q6ZN16 1313 aa22.57■■□□□ 1.2
HOXA9-201ENST00000343483 SOCS7O14512 581 aa22.57■■□□□ 1.2
HOXA9-201ENST00000343483 SGSM2O43147 1006 aa22.57■■□□□ 1.2
HOXA9-201ENST00000343483 ST18O60284 1047 aa22.57■■□□□ 1.2
HOXA9-201ENST00000343483 KRT27Q7Z3Y8 459 aa22.57■■□□□ 1.2
HOXA9-201ENST00000343483 EVI5LQ96CN4 794 aa22.57■■□□□ 1.2
HOXA9-201ENST00000343483 CIZ1Q9ULV3 898 aaPredicted RBP22.57■■□□□ 1.2
HOXA9-201ENST00000343483 TNNI3KQ59H18 835 aa22.56■■□□□ 1.2
HOXA9-201ENST00000343483 FPGT-TNNI3KV9GXZ4 949 aa22.56■■□□□ 1.2
HOXA9-201ENST00000343483 AK9Q5TCS8 1911 aa22.55■■□□□ 1.2
HOXA9-201ENST00000343483 TRIM28Q13263 835 aaKnown RBP22.55■■□□□ 1.2
HOXA9-201ENST00000343483 GIGYF2Q6Y7W6 1299 aaKnown RBP22.55■■□□□ 1.2
HOXA9-201ENST00000343483 BOLA2Q9H3K6 86 aa22.55■■□□□ 1.2
HOXA9-201ENST00000343483 PALD1Q9ULE6 856 aa22.55■■□□□ 1.2
HOXA9-201ENST00000343483 HLFQ16534 295 aa22.54■■□□□ 1.2
HOXA9-201ENST00000343483 FAM89AQ96GI7 184 aa22.54■■□□□ 1.2
HOXA9-201ENST00000343483 DBNLQ9UJU6 430 aaKnown RBP22.54■■□□□ 1.2
HOXA9-201ENST00000343483 GPTP24298 496 aa22.53■■□□□ 1.2
HOXA9-201ENST00000343483 KIAA1211Q6ZU35 1233 aa22.53■■□□□ 1.2
HOXA9-201ENST00000343483 RUFY2Q8WXA3 655 aa22.53■■□□□ 1.2
HOXA9-201ENST00000343483 PCCAP05165 728 aaPredicted RBP22.52■■□□□ 1.2
HOXA9-201ENST00000343483 ANAPC15P60006 121 aa22.52■■□□□ 1.2
HOXA9-201ENST00000343483 RAD50Q92878 1312 aa22.52■■□□□ 1.19
HOXA9-201ENST00000343483 EPB41L2O43491 1005 aaKnown RBP22.51■■□□□ 1.19
HOXA9-201ENST00000343483 NEK4P51957 841 aa22.51■■□□□ 1.19
HOXA9-201ENST00000343483 ZBTB38Q8NAP3 1195 aaPredicted RBP22.51■■□□□ 1.19
HOXA9-201ENST00000343483 ZNF594Q96JF6 807 aaPredicted RBP22.51■■□□□ 1.19
HOXA9-201ENST00000343483 ATP6V1AP38606 617 aa22.51■■□□□ 1.19
HOXA9-201ENST00000343483 IL6STP40189 918 aaPredicted RBP22.51■■□□□ 1.19
HOXA9-201ENST00000343483 HSP90AB3PQ58FF7 597 aa22.51■■□□□ 1.19
HOXA9-201ENST00000343483 ATG9AQ7Z3C6 839 aa22.51■■□□□ 1.19
HOXA9-201ENST00000343483 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
HOXA9-201ENST00000343483 RAB3GAP1Q15042 981 aa22.5■■□□□ 1.19
HOXA9-201ENST00000343483 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
HOXA9-201ENST00000343483 LSG1Q9H089 658 aaKnown RBP22.5■■□□□ 1.19
HOXA9-201ENST00000343483 DDX11L8A8MPP1 907 aa22.5■■□□□ 1.19
HOXA9-201ENST00000343483 HSPA4P34932 840 aa22.5■■□□□ 1.19
HOXA9-201ENST00000343483 CCDC57Q2TAC2 916 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms