RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 CREB3L3Q68CJ9 461 aa28.76■■■□□ 2.19
NELFB-201ENST00000343053 USP54Q70EL1 1684 aa28.76■■■□□ 2.19
NELFB-201ENST00000343053 ADCY5O95622 1261 aa28.76■■■□□ 2.19
NELFB-201ENST00000343053 EVI5LQ96CN4 794 aa28.75■■■□□ 2.19
NELFB-201ENST00000343053 G3BP1Q13283 466 aaKnown RBP eCLIP28.75■■■□□ 2.19
NELFB-201ENST00000343053 VPS53Q5VIR6 699 aa28.75■■■□□ 2.19
NELFB-201ENST00000343053 FSD1Q9BTV5 496 aa28.75■■■□□ 2.19
NELFB-201ENST00000343053 ZSWIM6Q9HCJ5 1215 aa28.75■■■□□ 2.19
NELFB-201ENST00000343053 LMO7Q8WWI1 1683 aa28.74■■■□□ 2.19
NELFB-201ENST00000343053 STK3Q13188 491 aa28.74■■■□□ 2.19
NELFB-201ENST00000343053 NECTIN1Q15223 517 aa28.74■■■□□ 2.19
NELFB-201ENST00000343053 VSIG10Q8N0Z9 540 aa28.74■■■□□ 2.19
NELFB-201ENST00000343053 ZKSCAN1P17029 563 aaPredicted RBP28.74■■■□□ 2.19
NELFB-201ENST00000343053 KCNH5Q8NCM2 988 aa28.74■■■□□ 2.19
NELFB-201ENST00000343053 ALDH1L1O75891 902 aa28.73■■■□□ 2.19
NELFB-201ENST00000343053 CHGBP05060 677 aa28.73■■■□□ 2.19
NELFB-201ENST00000343053 DNTTIP2Q5QJE6 756 aaKnown RBP28.73■■■□□ 2.19
NELFB-201ENST00000343053 CCDC9Q9Y3X0 531 aaKnown RBP28.73■■■□□ 2.19
NELFB-201ENST00000343053 CDC37L1Q7L3B6 337 aa28.72■■■□□ 2.19
NELFB-201ENST00000343053 RIC3Q7Z5B4 369 aa28.72■■■□□ 2.19
NELFB-201ENST00000343053 KIAA2012Q0VF49 1180 aa28.71■■■□□ 2.19
NELFB-201ENST00000343053 ERC1Q8IUD2 1116 aa28.71■■■□□ 2.19
NELFB-201ENST00000343053 ZNF589Q86UQ0 364 aaPredicted RBP28.71■■■□□ 2.19
NELFB-201ENST00000343053 SLC27A2O14975 620 aa28.7■■■□□ 2.19
NELFB-201ENST00000343053 IGKV5-2P06315 115 aa28.7■■■□□ 2.19
NELFB-201ENST00000343053 AMOTQ4VCS5 1084 aa28.7■■■□□ 2.19
NELFB-201ENST00000343053 ATP6V1DQ9Y5K8 247 aa28.7■■■□□ 2.19
NELFB-201ENST00000343053 EPHA10Q5JZY3 1008 aa28.7■■■□□ 2.18
NELFB-201ENST00000343053 LINS1Q8NG48 757 aa28.7■■■□□ 2.18
NELFB-201ENST00000343053 ZC3H6P61129 1189 aaKnown RBP28.69■■■□□ 2.18
NELFB-201ENST00000343053 LARP1BQ659C4 914 aaKnown RBP28.69■■■□□ 2.18
NELFB-201ENST00000343053 MCM5P33992 734 aa28.69■■■□□ 2.18
NELFB-201ENST00000343053 CAMK4Q16566 473 aa28.69■■■□□ 2.18
NELFB-201ENST00000343053 ARHGEF25Q86VW2 580 aa28.69■■■□□ 2.18
NELFB-201ENST00000343053 GLIPR1L2Q4G1C9 344 aa28.68■■■□□ 2.18
NELFB-201ENST00000343053 CSPP1Q1MSJ5 1256 aa28.67■■■□□ 2.18
NELFB-201ENST00000343053 FAM184AQ8NB25 1140 aa28.67■■■□□ 2.18
NELFB-201ENST00000343053 AP5Z1O43299 807 aa28.67■■■□□ 2.18
NELFB-201ENST00000343053 PDIA6Q15084 440 aa28.66■■■□□ 2.18
NELFB-201ENST00000343053 MYD88Q99836 296 aa28.66■■■□□ 2.18
NELFB-201ENST00000343053 CHMP4AQ9BY43 222 aa28.66■■■□□ 2.18
NELFB-201ENST00000343053 SH2B1Q9NRF2 756 aaPredicted RBP28.66■■■□□ 2.18
NELFB-201ENST00000343053 MAP4K1Q92918 833 aa28.66■■■□□ 2.18
NELFB-201ENST00000343053 TTC6Q86TZ1 520 aa28.66■■■□□ 2.18
NELFB-201ENST00000343053 SPC24Q8NBT2 197 aa28.66■■■□□ 2.18
NELFB-201ENST00000343053 ZSCAN31Q96LW9 406 aaPredicted RBP28.66■■■□□ 2.18
NELFB-201ENST00000343053 DDX21Q9NR30 783 aaKnown RBP eCLIP28.65■■■□□ 2.18
NELFB-201ENST00000343053 DDX58O95786 925 aaKnown RBP28.65■■■□□ 2.18
NELFB-201ENST00000343053 BLOC1S2Q6QNY1 142 aa28.65■■■□□ 2.18
NELFB-201ENST00000343053 XAGE3Q8WTP9 111 aa28.65■■■□□ 2.18
NELFB-201ENST00000343053 TSC1Q92574 1164 aa28.65■■■□□ 2.18
NELFB-201ENST00000343053 TM6SF1Q9BZW5 370 aa28.65■■■□□ 2.18
NELFB-201ENST00000343053 TFIP11Q9UBB9 837 aaKnown RBP28.65■■■□□ 2.18
NELFB-201ENST00000343053 ANKLE2Q86XL3 938 aa28.64■■■□□ 2.17
NELFB-201ENST00000343053 CCDC129Q6ZRS4 1044 aa28.63■■■□□ 2.17
NELFB-201ENST00000343053 COPS6Q7L5N1 327 aa28.63■■■□□ 2.17
NELFB-201ENST00000343053 LIG1P18858 919 aa28.63■■■□□ 2.17
NELFB-201ENST00000343053 FUCA2Q9BTY2 467 aa28.63■■■□□ 2.17
NELFB-201ENST00000343053 UVSSAQ2YD98 709 aa28.62■■■□□ 2.17
NELFB-201ENST00000343053 PDCL3Q9H2J4 239 aa28.62■■■□□ 2.17
NELFB-201ENST00000343053 CHD2O14647 1828 aaKnown RBP28.62■■■□□ 2.17
NELFB-201ENST00000343053 KDM4AO75164 1064 aa28.62■■■□□ 2.17
NELFB-201ENST00000343053 NFATC2IPQ8NCF5 419 aa28.62■■■□□ 2.17
NELFB-201ENST00000343053 KCNB2Q92953 911 aa28.62■■■□□ 2.17
NELFB-201ENST00000343053 HEG1Q9ULI3 1381 aa28.61■■■□□ 2.17
NELFB-201ENST00000343053 CKAP2LQ8IYA6 745 aa28.61■■■□□ 2.17
NELFB-201ENST00000343053 NEURL1BA8MQ27 555 aa28.61■■■□□ 2.17
NELFB-201ENST00000343053 LARP1Q6PKG0 1096 aaKnown RBP28.61■■■□□ 2.17
NELFB-201ENST00000343053 SASS6Q6UVJ0 657 aa28.61■■■□□ 2.17
NELFB-201ENST00000343053 DNAJC2Q99543 621 aaKnown RBP28.61■■■□□ 2.17
NELFB-201ENST00000343053 RGPD5Q99666 1765 aa28.61■■■□□ 2.17
NELFB-201ENST00000343053 NPHP4O75161 1426 aaPredicted RBP28.6■■■□□ 2.17
NELFB-201ENST00000343053 SEC62Q99442 399 aaKnown RBP28.6■■■□□ 2.17
NELFB-201ENST00000343053 LETM1O95202 739 aaPredicted RBP28.6■■■□□ 2.17
NELFB-201ENST00000343053 FOSBP53539 338 aa28.6■■■□□ 2.17
NELFB-201ENST00000343053 ZNF790Q6PG37 636 aa28.6■■■□□ 2.17
NELFB-201ENST00000343053 NLRP2Q9NX02 1062 aa28.6■■■□□ 2.17
NELFB-201ENST00000343053 FAM177BA6PVY3 158 aa28.59■■■□□ 2.17
NELFB-201ENST00000343053 TOB2Q14106 344 aaPredicted RBP28.59■■■□□ 2.17
NELFB-201ENST00000343053 LRRC2Q9BYS8 371 aa28.59■■■□□ 2.17
NELFB-201ENST00000343053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.59■■■□□ 2.17
NELFB-201ENST00000343053 ATP5J2-PTCD1G3V325 749 aa28.59■■■□□ 2.17
NELFB-201ENST00000343053 PTCD1O75127 700 aaKnown RBP28.59■■■□□ 2.17
NELFB-201ENST00000343053 TERF1P54274 439 aa28.59■■■□□ 2.17
NELFB-201ENST00000343053 NEXNQ0ZGT2 675 aa28.59■■■□□ 2.17
NELFB-201ENST00000343053 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
NELFB-201ENST00000343053 JAK2O60674 1132 aa28.58■■■□□ 2.17
NELFB-201ENST00000343053 KRT85P78386 507 aa28.58■■■□□ 2.17
NELFB-201ENST00000343053 RPS6KB1P23443 525 aa28.58■■■□□ 2.17
NELFB-201ENST00000343053 NCAPD2Q15021 1401 aa28.58■■■□□ 2.17
NELFB-201ENST00000343053 PPFIA3O75145 1194 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 PSMA5P28066 241 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 GCKRQ14397 625 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 NOLC1Q14978 699 aaKnown RBP eCLIP28.57■■■□□ 2.16
NELFB-201ENST00000343053 SLFNL1Q499Z3 407 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 DDX11Q96FC9 970 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 DBNLQ9UJU6 430 aaKnown RBP28.57■■■□□ 2.16
NELFB-201ENST00000343053 TFCP2Q12800 502 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 UBE3BQ7Z3V4 1068 aa28.57■■■□□ 2.16
NELFB-201ENST00000343053 DDX17Q92841 729 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms