RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 H7C1W4 665 aa20.51■□□□□ 0.87
SNED1-202ENST00000342631 NBPF7P0C2Y1 421 aaPredicted RBP20.51■□□□□ 0.87
SNED1-202ENST00000342631 SMIM5Q71RC9 77 aa20.51■□□□□ 0.87
SNED1-202ENST00000342631 NIP7Q9Y221 180 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNED1-202ENST00000342631 PCCAP05165 728 aaPredicted RBP20.5■□□□□ 0.87
SNED1-202ENST00000342631 PPP1R42Q7Z4L9 355 aa20.5■□□□□ 0.87
SNED1-202ENST00000342631 ANO8Q9HCE9 1232 aaPredicted RBP20.5■□□□□ 0.87
SNED1-202ENST00000342631 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
SNED1-202ENST00000342631 GPTP24298 496 aa20.49■□□□□ 0.87
SNED1-202ENST00000342631 RPAP2Q8IXW5 612 aaPredicted RBP20.49■□□□□ 0.87
SNED1-202ENST00000342631 ZBTB38Q8NAP3 1195 aaPredicted RBP20.49■□□□□ 0.87
SNED1-202ENST00000342631 COL23A1Q86Y22 540 aaPredicted RBP20.49■□□□□ 0.87
SNED1-202ENST00000342631 UBN2Q6ZU65 1347 aa20.48■□□□□ 0.87
SNED1-202ENST00000342631 GYS1P13807 737 aa20.48■□□□□ 0.87
SNED1-202ENST00000342631 CCDC136Q96JN2 1154 aa20.48■□□□□ 0.87
SNED1-202ENST00000342631 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
SNED1-202ENST00000342631 HSP90B1P14625 803 aaKnown RBP20.47■□□□□ 0.87
SNED1-202ENST00000342631 CASP7P55210 303 aa20.47■□□□□ 0.87
SNED1-202ENST00000342631 UBE3BQ7Z3V4 1068 aa20.47■□□□□ 0.87
SNED1-202ENST00000342631 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
SNED1-202ENST00000342631 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
SNED1-202ENST00000342631 CDHR2Q9BYE9 1310 aa20.47■□□□□ 0.87
SNED1-202ENST00000342631 COL24A1Q17RW2 1714 aa20.47■□□□□ 0.87
SNED1-202ENST00000342631 TBC1D9BQ66K14 1250 aa20.47■□□□□ 0.87
SNED1-202ENST00000342631 NLGN1Q8N2Q7 840 aa20.47■□□□□ 0.87
SNED1-202ENST00000342631 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
SNED1-202ENST00000342631 NYXQ9GZU5 481 aa20.46■□□□□ 0.87
SNED1-202ENST00000342631 TRMT112Q9UI30 125 aaKnown RBP20.46■□□□□ 0.87
SNED1-202ENST00000342631 ANKRD44Q8N8A2 993 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 MSH5O43196 834 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 HDAC1Q13547 482 aaPredicted RBP20.45■□□□□ 0.86
SNED1-202ENST00000342631 SUSD4Q5VX71 490 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 CEP85Q6P2H3 762 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 ILDR2Q71H61 639 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 PLA2G12BQ9BX93 195 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 RWDD1Q9H446 243 aaPredicted RBP20.45■□□□□ 0.86
SNED1-202ENST00000342631 CARMIL3Q8ND23 1372 aa20.45■□□□□ 0.86
SNED1-202ENST00000342631 HMMRO75330 724 aa20.44■□□□□ 0.86
SNED1-202ENST00000342631 MTX1Q13505 466 aa20.44■□□□□ 0.86
SNED1-202ENST00000342631 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
SNED1-202ENST00000342631 NTSR2O95665 410 aa20.43■□□□□ 0.86
SNED1-202ENST00000342631 SUCLG2Q96I99 432 aa20.43■□□□□ 0.86
SNED1-202ENST00000342631 TM4SF1P30408 202 aa20.43■□□□□ 0.86
SNED1-202ENST00000342631 ATP8B2P98198 1209 aa20.43■□□□□ 0.86
SNED1-202ENST00000342631 NFIXQ14938 502 aa20.43■□□□□ 0.86
SNED1-202ENST00000342631 SLC16A10Q8TF71 515 aa20.43■□□□□ 0.86
SNED1-202ENST00000342631 FAM89AQ96GI7 184 aa20.43■□□□□ 0.86
SNED1-202ENST00000342631 TPTE2Q6XPS3 522 aa20.42■□□□□ 0.86
SNED1-202ENST00000342631 BICDL1Q6ZP65 573 aa20.42■□□□□ 0.86
SNED1-202ENST00000342631 RABL6Q3YEC7 729 aaPredicted RBP20.41■□□□□ 0.86
SNED1-202ENST00000342631 KAZALD1Q96I82 304 aa20.41■□□□□ 0.86
SNED1-202ENST00000342631 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
SNED1-202ENST00000342631 BICC1Q9H694 974 aaKnown RBP20.41■□□□□ 0.86
SNED1-202ENST00000342631 LAMB2P55268 1798 aa20.4■□□□□ 0.86
SNED1-202ENST00000342631 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
SNED1-202ENST00000342631 B4GALNT3Q6L9W6 998 aa20.4■□□□□ 0.86
SNED1-202ENST00000342631 SIRT2Q8IXJ6 389 aa20.39■□□□□ 0.86
SNED1-202ENST00000342631 MYH3P11055 1940 aa20.39■□□□□ 0.85
SNED1-202ENST00000342631 PDE8AO60658 829 aa20.39■□□□□ 0.85
SNED1-202ENST00000342631 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
SNED1-202ENST00000342631 FOXO4P98177 505 aa20.39■□□□□ 0.85
SNED1-202ENST00000342631 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
SNED1-202ENST00000342631 CENPQQ7L2Z9 268 aaPredicted RBP20.39■□□□□ 0.85
SNED1-202ENST00000342631 SSH3Q8TE77 659 aa20.39■□□□□ 0.85
SNED1-202ENST00000342631 JARID2Q92833 1246 aaPredicted RBP20.39■□□□□ 0.85
SNED1-202ENST00000342631 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
SNED1-202ENST00000342631 FAM177BA6PVY3 158 aa20.37■□□□□ 0.85
SNED1-202ENST00000342631 SRGAP3O43295 1099 aa20.37■□□□□ 0.85
SNED1-202ENST00000342631 POLA2Q14181 598 aa20.37■□□□□ 0.85
SNED1-202ENST00000342631 EPHA10Q5JZY3 1008 aa20.37■□□□□ 0.85
SNED1-202ENST00000342631 KDM2BQ8NHM5 1336 aa20.36■□□□□ 0.85
SNED1-202ENST00000342631 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
SNED1-202ENST00000342631 DDX60Q8IY21 1712 aaKnown RBP20.36■□□□□ 0.85
SNED1-202ENST00000342631 POLRMTO00411 1230 aaKnown RBP20.36■□□□□ 0.85
SNED1-202ENST00000342631 IGHDP01880 384 aa20.36■□□□□ 0.85
SNED1-202ENST00000342631 SERPINB2P05120 415 aa20.36■□□□□ 0.85
SNED1-202ENST00000342631 CSF1RP07333 972 aa20.36■□□□□ 0.85
SNED1-202ENST00000342631 CNBD1Q8NA66 436 aa20.36■□□□□ 0.85
SNED1-202ENST00000342631 PNMA6EA0A0J9YXQ4 647 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 CTSWP56202 376 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 LMBR1LQ6UX01 489 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 SYNE4Q8N205 404 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 NPHP1O15259 732 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 NRXN2Q9P2S2 1712 aa20.35■□□□□ 0.85
SNED1-202ENST00000342631 DDR1Q08345 913 aa20.34■□□□□ 0.85
SNED1-202ENST00000342631 DCTPP1Q9H773 170 aa20.34■□□□□ 0.85
SNED1-202ENST00000342631 PARP3Q9Y6F1 533 aa20.34■□□□□ 0.85
SNED1-202ENST00000342631 ST5P78524 1137 aa20.33■□□□□ 0.85
SNED1-202ENST00000342631 SMC5Q8IY18 1101 aa20.33■□□□□ 0.85
SNED1-202ENST00000342631 TTLL11Q8NHH1 800 aa20.33■□□□□ 0.85
SNED1-202ENST00000342631 MMP10P09238 476 aa20.33■□□□□ 0.84
SNED1-202ENST00000342631 HCLS1P14317 486 aaPredicted RBP20.33■□□□□ 0.84
SNED1-202ENST00000342631 PRR5LQ6MZQ0 368 aa20.33■□□□□ 0.84
SNED1-202ENST00000342631 CASZ1Q86V15 1759 aa20.32■□□□□ 0.84
SNED1-202ENST00000342631 RTL9Q8NET4 1388 aa20.32■□□□□ 0.84
SNED1-202ENST00000342631 HSP90AB4PQ58FF6 505 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms