RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 DZIP3Q86Y13 1208 aaKnown RBP21.22■□□□□ 0.99
FRMD4A-202ENST00000342409 IL1RAPL2Q9NP60 686 aa21.22■□□□□ 0.99
FRMD4A-202ENST00000342409 TBC1D2BQ9UPU7 963 aa21.22■□□□□ 0.99
FRMD4A-202ENST00000342409 ERVV-1B6SEH8 477 aa21.21■□□□□ 0.99
FRMD4A-202ENST00000342409 KIF1BPQ96EK5 621 aa21.21■□□□□ 0.99
FRMD4A-202ENST00000342409 RTL5Q5HYW3 569 aaPredicted RBP21.2■□□□□ 0.98
FRMD4A-202ENST00000342409 NPM2Q86SE8 214 aaKnown RBP21.2■□□□□ 0.98
FRMD4A-202ENST00000342409 KLHDC4Q8TBB5 520 aa21.2■□□□□ 0.98
FRMD4A-202ENST00000342409 ARXQ96QS3 562 aa21.2■□□□□ 0.98
FRMD4A-202ENST00000342409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.2■□□□□ 0.98
FRMD4A-202ENST00000342409 SCN7AQ01118 1682 aa21.19■□□□□ 0.98
FRMD4A-202ENST00000342409 HSP90AB4PQ58FF6 505 aa21.19■□□□□ 0.98
FRMD4A-202ENST00000342409 NLRP10Q86W26 655 aa21.19■□□□□ 0.98
FRMD4A-202ENST00000342409 STAP2Q9UGK3 403 aa21.19■□□□□ 0.98
FRMD4A-202ENST00000342409 CASZ1Q86V15 1759 aa21.19■□□□□ 0.98
FRMD4A-202ENST00000342409 SASH1O94885 1247 aa21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 TSHZ3Q63HK5 1081 aa21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 CAMTA2O94983 1202 aa21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 MX1P20591 662 aa21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 GPTP24298 496 aa21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 PTPN12Q05209 780 aaKnown RBP21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 LMBR1LQ6UX01 489 aa21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 COPRSQ9NQ92 184 aa21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 DDX60Q8IY21 1712 aaKnown RBP21.18■□□□□ 0.98
FRMD4A-202ENST00000342409 HSP90AB3PQ58FF7 597 aa21.17■□□□□ 0.98
FRMD4A-202ENST00000342409 ZNF34Q8IZ26 560 aa21.17■□□□□ 0.98
FRMD4A-202ENST00000342409 LAMB2P55268 1798 aa21.17■□□□□ 0.98
FRMD4A-202ENST00000342409 UBN2Q6ZU65 1347 aa21.17■□□□□ 0.98
FRMD4A-202ENST00000342409 CNTNAP4Q9C0A0 1308 aa21.17■□□□□ 0.98
FRMD4A-202ENST00000342409 C4BP0C0L5 1744 aa21.16■□□□□ 0.98
FRMD4A-202ENST00000342409 NUTM1Q86Y26 1132 aa21.16■□□□□ 0.98
FRMD4A-202ENST00000342409 SYNE4Q8N205 404 aa21.16■□□□□ 0.98
FRMD4A-202ENST00000342409 C4AP0C0L4 1744 aa21.16■□□□□ 0.98
FRMD4A-202ENST00000342409 SDSP20132 328 aa21.15■□□□□ 0.98
FRMD4A-202ENST00000342409 ZBTB38Q8NAP3 1195 aaPredicted RBP21.15■□□□□ 0.98
FRMD4A-202ENST00000342409 FAM89AQ96GI7 184 aa21.15■□□□□ 0.98
FRMD4A-202ENST00000342409 OS9Q13438 667 aaPredicted RBP21.15■□□□□ 0.98
FRMD4A-202ENST00000342409 TBC1D9Q6ZT07 1266 aa21.15■□□□□ 0.98
FRMD4A-202ENST00000342409 PLA2G12BQ9BX93 195 aa21.15■□□□□ 0.98
FRMD4A-202ENST00000342409 SIL1Q9H173 461 aa21.15■□□□□ 0.98
FRMD4A-202ENST00000342409 ANP32AP39687 249 aaKnown RBP21.14■□□□□ 0.97
FRMD4A-202ENST00000342409 ERC1Q8IUD2 1116 aa21.14■□□□□ 0.97
FRMD4A-202ENST00000342409 CDHR2Q9BYE9 1310 aa21.14■□□□□ 0.97
FRMD4A-202ENST00000342409 G3BP1Q13283 466 aaKnown RBP eCLIP21.13■□□□□ 0.97
FRMD4A-202ENST00000342409 BCL11BQ9C0K0 894 aaPredicted RBP21.13■□□□□ 0.97
FRMD4A-202ENST00000342409 AOX1Q06278 1338 aa21.13■□□□□ 0.97
FRMD4A-202ENST00000342409 USP42Q9H9J4 1324 aaKnown RBP21.13■□□□□ 0.97
FRMD4A-202ENST00000342409 UBR3Q6ZT12 1888 aa21.13■□□□□ 0.97
FRMD4A-202ENST00000342409 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
FRMD4A-202ENST00000342409 KRT27Q7Z3Y8 459 aa21.12■□□□□ 0.97
FRMD4A-202ENST00000342409 MSH5O43196 834 aa21.12■□□□□ 0.97
FRMD4A-202ENST00000342409 SMIM5Q71RC9 77 aa21.12■□□□□ 0.97
FRMD4A-202ENST00000342409 PI4K2BQ8TCG2 481 aa21.12■□□□□ 0.97
FRMD4A-202ENST00000342409 CCNL1Q9UK58 526 aaPredicted RBP21.12■□□□□ 0.97
FRMD4A-202ENST00000342409 CDC45O75419 566 aa21.11■□□□□ 0.97
FRMD4A-202ENST00000342409 RBM6P78332 1123 aaKnown RBP21.11■□□□□ 0.97
FRMD4A-202ENST00000342409 ZNF772Q68DY9 489 aaPredicted RBP21.11■□□□□ 0.97
FRMD4A-202ENST00000342409 CSF1RP07333 972 aa21.1■□□□□ 0.97
FRMD4A-202ENST00000342409 AMIGO3Q86WK7 504 aa21.1■□□□□ 0.97
FRMD4A-202ENST00000342409 EAF2Q96CJ1 260 aaPredicted RBP21.1■□□□□ 0.97
FRMD4A-202ENST00000342409 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
FRMD4A-202ENST00000342409 COL24A1Q17RW2 1714 aa21.1■□□□□ 0.97
FRMD4A-202ENST00000342409 MFAP1P55081 439 aaKnown RBP21.09■□□□□ 0.97
FRMD4A-202ENST00000342409 SUSD4Q5VX71 490 aa21.09■□□□□ 0.97
FRMD4A-202ENST00000342409 FAM196AQ6ZSG2 479 aa21.09■□□□□ 0.97
FRMD4A-202ENST00000342409 ATG9AQ7Z3C6 839 aa21.09■□□□□ 0.97
FRMD4A-202ENST00000342409 CLASRPQ8N2M8 674 aaKnown RBP21.09■□□□□ 0.97
FRMD4A-202ENST00000342409 CHMP3Q9Y3E7 222 aa21.09■□□□□ 0.97
FRMD4A-202ENST00000342409 RPS6KA4O75676 772 aa21.08■□□□□ 0.97
FRMD4A-202ENST00000342409 LRRC4BQ9NT99 713 aa21.08■□□□□ 0.97
FRMD4A-202ENST00000342409 TRMT112Q9UI30 125 aaKnown RBP21.08■□□□□ 0.97
FRMD4A-202ENST00000342409 SPEF2Q9C093 1822 aa21.08■□□□□ 0.96
FRMD4A-202ENST00000342409 ZNF594Q96JF6 807 aaPredicted RBP21.07■□□□□ 0.96
FRMD4A-202ENST00000342409 IPO9Q96P70 1041 aaKnown RBP21.07■□□□□ 0.96
FRMD4A-202ENST00000342409 BCL2L12Q9HB09 334 aa21.07■□□□□ 0.96
FRMD4A-202ENST00000342409 TFCP2Q12800 502 aa21.07■□□□□ 0.96
FRMD4A-202ENST00000342409 AACSQ86V21 672 aa21.07■□□□□ 0.96
FRMD4A-202ENST00000342409 TLR7Q9NYK1 1049 aaKnown RBP21.07■□□□□ 0.96
FRMD4A-202ENST00000342409 IRS4O14654 1257 aaPredicted RBP21.06■□□□□ 0.96
FRMD4A-202ENST00000342409 TTC41PQ6P2S7 1318 aa21.05■□□□□ 0.96
FRMD4A-202ENST00000342409 TRIM37O94972 964 aa21.05■□□□□ 0.96
FRMD4A-202ENST00000342409 TTLL11Q8NHH1 800 aa21.05■□□□□ 0.96
FRMD4A-202ENST00000342409 CCDC8Q9H0W5 538 aaPredicted RBP21.05■□□□□ 0.96
FRMD4A-202ENST00000342409 LRP5O75197 1615 aa21.05■□□□□ 0.96
FRMD4A-202ENST00000342409 GNPATO15228 680 aa21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 NTSR2O95665 410 aa21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 CTSWP56202 376 aa21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 LRRC24Q50LG9 513 aa21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 CLEC4GQ6UXB4 293 aa21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 CCDC85AQ96PX6 553 aaPredicted RBP21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 PUS3Q9BZE2 481 aaKnown RBP21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 RGS17Q9UGC6 210 aaPredicted RBP21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 IFIT2P09913 472 aaKnown RBP21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 PARP10Q53GL7 1025 aa21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 NIP7Q9Y221 180 aaKnown RBP eCLIP21.04■□□□□ 0.96
FRMD4A-202ENST00000342409 TAF1P21675 1872 aa21.03■□□□□ 0.96
FRMD4A-202ENST00000342409 TNS1Q9HBL0 1735 aaKnown RBP21.03■□□□□ 0.96
FRMD4A-202ENST00000342409 EYA2O00167 538 aa21.03■□□□□ 0.96
FRMD4A-202ENST00000342409 C22orf23Q9BZE7 217 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms