RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 EPHA10Q5JZY3 1008 aa8.73□□□□□ -1.01
PTPRR-202ENST00000342084 CREB3L3Q68CJ9 461 aa8.73□□□□□ -1.01
PTPRR-202ENST00000342084 GIMAP6Q6P9H5 292 aa8.73□□□□□ -1.01
PTPRR-202ENST00000342084 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.73□□□□□ -1.01
PTPRR-202ENST00000342084 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
PTPRR-202ENST00000342084 MTMR6Q9Y217 621 aa8.73□□□□□ -1.01
PTPRR-202ENST00000342084 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.73□□□□□ -1.01
PTPRR-202ENST00000342084 EPB41L2O43491 1005 aaKnown RBP8.72□□□□□ -1.01
PTPRR-202ENST00000342084 ZNF500O60304 480 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-202ENST00000342084 ALDH1L1O75891 902 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 TPM2P07951 284 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 AMOTQ4VCS5 1084 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 HS1BP3Q53T59 392 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 CCDC183Q5T5S1 534 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 RIC3Q7Z5B4 369 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 C17orf53Q8N3J3 647 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-202ENST00000342084 RUFY2Q8WXA3 655 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 GPATCH3Q96I76 525 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 ZSWIM6Q9HCJ5 1215 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 TPCN1Q9ULQ1 816 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 CHMP3Q9Y3E7 222 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 CCDC9Q9Y3X0 531 aaKnown RBP8.72□□□□□ -1.01
PTPRR-202ENST00000342084 CYP46A1Q9Y6A2 500 aa8.72□□□□□ -1.01
PTPRR-202ENST00000342084 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPRR-202ENST00000342084 SLC27A2O14975 620 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 G3BP1Q13283 466 aaKnown RBP eCLIP8.71□□□□□ -1.01
PTPRR-202ENST00000342084 NECTIN1Q15223 517 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 VPS53Q5VIR6 699 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 ZNF589Q86UQ0 364 aaPredicted RBP8.71□□□□□ -1.01
PTPRR-202ENST00000342084 TMEM87AQ8NBN3 555 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 LINS1Q8NG48 757 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 DDX17Q92841 729 aaKnown RBP8.71□□□□□ -1.01
PTPRR-202ENST00000342084 EVI5LQ96CN4 794 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 MYD88Q99836 296 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 FSD1Q9BTV5 496 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 HEG1Q9ULI3 1381 aa8.71□□□□□ -1.01
PTPRR-202ENST00000342084 C5P01031 1676 aa8.71□□□□□ -1.02
PTPRR-202ENST00000342084 PHF14O94880 888 aa8.71□□□□□ -1.02
PTPRR-202ENST00000342084 STK3Q13188 491 aa8.71□□□□□ -1.02
PTPRR-202ENST00000342084 CDC37L1Q7L3B6 337 aa8.71□□□□□ -1.02
PTPRR-202ENST00000342084 ERC1Q8IUD2 1116 aa8.71□□□□□ -1.02
PTPRR-202ENST00000342084 XAGE3Q8WTP9 111 aa8.71□□□□□ -1.02
PTPRR-202ENST00000342084 RGPD5Q99666 1765 aa8.71□□□□□ -1.02
PTPRR-202ENST00000342084 NPHP4O75161 1426 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-202ENST00000342084 NCAPD2Q15021 1401 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 ADCY5O95622 1261 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 ATXN8OSP0DMR3 200 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 UBE2HP62256 183 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 TTC12Q9H892 705 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-202ENST00000342084 DDX21Q9NR30 783 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTPRR-202ENST00000342084 SLIT3O75094 1523 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 NEURL1BA8MQ27 555 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 AP5Z1O43299 807 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 RRP9O43818 475 aaKnown RBP8.7□□□□□ -1.02
PTPRR-202ENST00000342084 ZKSCAN1P17029 563 aaPredicted RBP8.7□□□□□ -1.02
PTPRR-202ENST00000342084 CCDC129Q6ZRS4 1044 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 MAP4K1Q92918 833 aa8.7□□□□□ -1.02
PTPRR-202ENST00000342084 SIPA1L3O60292 1781 aaPredicted RBP8.69□□□□□ -1.02
PTPRR-202ENST00000342084 KDM6AO15550 1401 aaPredicted RBP8.69□□□□□ -1.02
PTPRR-202ENST00000342084 UQCRHLA0A096LP55 91 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 DDX58O95786 925 aaKnown RBP8.69□□□□□ -1.02
PTPRR-202ENST00000342084 UQCRHP07919 91 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 ZNF790Q6PG37 636 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 KRT28Q7Z3Y7 464 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 KCNB2Q92953 911 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 ARID3AQ99856 593 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 NLRP2Q9NX02 1062 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 COL15A1P39059 1388 aa8.69□□□□□ -1.02
PTPRR-202ENST00000342084 TRPM3Q9HCF6 1732 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 PTCD1O75127 700 aaKnown RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 TFCP2Q12800 502 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 CAMK4Q16566 473 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 SLFNL1Q499Z3 407 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 TTC6Q86TZ1 520 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 ZNF496Q96IT1 587 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 SEC62Q99442 399 aaKnown RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 TM6SF1Q9BZW5 370 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 PODXL2Q9NZ53 605 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 USP16Q9Y5T5 823 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 UTYO14607 1347 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 JAK2O60674 1132 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 LIG1P18858 919 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 RPS6KB1P23443 525 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 KIAA2012Q0VF49 1180 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 TOB2Q14106 344 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 GCKRQ14397 625 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 LARP1BQ659C4 914 aaKnown RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 LARP1Q6PKG0 1096 aaKnown RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 BLOC1S2Q6QNY1 142 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 ZSCAN31Q96LW9 406 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 DNAJC2Q99543 621 aaKnown RBP8.68□□□□□ -1.02
PTPRR-202ENST00000342084 FUCA2Q9BTY2 467 aa8.68□□□□□ -1.02
PTPRR-202ENST00000342084 CHMP4AQ9BY43 222 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms