RNA–Protein interactions for RNA: ENST00000342018.12

GTF3C5-201, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 5 BASIC

Gene GTF3C5, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-201ENST00000342018 ANKRD36CQ5JPF3 1778 aa24.19■■□□□ 1.46
GTF3C5-201ENST00000342018 BCORQ6W2J9 1755 aa24.19■■□□□ 1.46
GTF3C5-201ENST00000342018 ADRA2BP18089 450 aa24.19■■□□□ 1.46
GTF3C5-201ENST00000342018 SSFA2P28290 1259 aa24.19■■□□□ 1.46
GTF3C5-201ENST00000342018 ANKRD44Q8N8A2 993 aa24.19■■□□□ 1.46
GTF3C5-201ENST00000342018 RPAP2Q8IXW5 612 aaPredicted RBP24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 BCL2L12Q9HB09 334 aa24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 C4AP0C0L4 1744 aa24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 H7C1W4 665 aa24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 MSH5O43196 834 aa24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 HDAC1Q13547 482 aaPredicted RBP24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 CLEC4GQ6UXB4 293 aa24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 CENPQQ7L2Z9 268 aaPredicted RBP24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 FAM89AQ96GI7 184 aa24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 HDAC5Q9UQL6 1122 aa24.18■■□□□ 1.46
GTF3C5-201ENST00000342018 KDM2BQ8NHM5 1336 aa24.17■■□□□ 1.46
GTF3C5-201ENST00000342018 USP42Q9H9J4 1324 aaKnown RBP24.17■■□□□ 1.46
GTF3C5-201ENST00000342018 SCN7AQ01118 1682 aa24.16■■□□□ 1.46
GTF3C5-201ENST00000342018 TBC1D9BQ66K14 1250 aa24.16■■□□□ 1.46
GTF3C5-201ENST00000342018 BICC1Q9H694 974 aaKnown RBP24.16■■□□□ 1.46
GTF3C5-201ENST00000342018 TRMT112Q9UI30 125 aaKnown RBP24.16■■□□□ 1.46
GTF3C5-201ENST00000342018 IBTKQ9P2D0 1353 aaPredicted RBP24.16■■□□□ 1.46
GTF3C5-201ENST00000342018 SUSD4Q5VX71 490 aa24.16■■□□□ 1.46
GTF3C5-201ENST00000342018 PNMA6EA0A0J9YXQ4 647 aa24.15■■□□□ 1.46
GTF3C5-201ENST00000342018 CASP7P55210 303 aa24.15■■□□□ 1.46
GTF3C5-201ENST00000342018 CCDC125Q86Z20 511 aa24.15■■□□□ 1.46
GTF3C5-201ENST00000342018 SYNE4Q8N205 404 aa24.15■■□□□ 1.46
GTF3C5-201ENST00000342018 KAZALD1Q96I82 304 aa24.15■■□□□ 1.46
GTF3C5-201ENST00000342018 ANO8Q9HCE9 1232 aaPredicted RBP24.15■■□□□ 1.46
GTF3C5-201ENST00000342018 ATP8B2P98198 1209 aa24.14■■□□□ 1.46
GTF3C5-201ENST00000342018 EPHA10Q5JZY3 1008 aa24.14■■□□□ 1.46
GTF3C5-201ENST00000342018 ZBTB38Q8NAP3 1195 aaPredicted RBP24.14■■□□□ 1.46
GTF3C5-201ENST00000342018 PCCAP05165 728 aaPredicted RBP24.14■■□□□ 1.45
GTF3C5-201ENST00000342018 PARP10Q53GL7 1025 aa24.14■■□□□ 1.45
GTF3C5-201ENST00000342018 PPP1R42Q7Z4L9 355 aa24.14■■□□□ 1.45
GTF3C5-201ENST00000342018 HMMRO75330 724 aa24.13■■□□□ 1.45
GTF3C5-201ENST00000342018 STK32BQ9NY57 414 aa24.13■■□□□ 1.45
GTF3C5-201ENST00000342018 SRGAP3O43295 1099 aa24.12■■□□□ 1.45
GTF3C5-201ENST00000342018 UTP14AQ9BVJ6 771 aaKnown RBP24.12■■□□□ 1.45
GTF3C5-201ENST00000342018 COL23A1Q86Y22 540 aaPredicted RBP24.12■■□□□ 1.45
GTF3C5-201ENST00000342018 SETDB2Q96T68 719 aa24.12■■□□□ 1.45
GTF3C5-201ENST00000342018 TUBGCP6Q96RT7 1819 aa24.11■■□□□ 1.45
GTF3C5-201ENST00000342018 GYS1P13807 737 aa24.1■■□□□ 1.45
GTF3C5-201ENST00000342018 SLC15A2Q16348 729 aa24.1■■□□□ 1.45
GTF3C5-201ENST00000342018 CHMP3Q9Y3E7 222 aa24.1■■□□□ 1.45
GTF3C5-201ENST00000342018 RGL2O15211 777 aa24.1■■□□□ 1.45
GTF3C5-201ENST00000342018 NUTM1Q86Y26 1132 aa24.1■■□□□ 1.45
GTF3C5-201ENST00000342018 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
GTF3C5-201ENST00000342018 IRS4O14654 1257 aaPredicted RBP24.09■■□□□ 1.45
GTF3C5-201ENST00000342018 FLAD1Q8NFF5 587 aa24.09■■□□□ 1.45
GTF3C5-201ENST00000342018 NTSR2O95665 410 aa24.08■■□□□ 1.45
GTF3C5-201ENST00000342018 SH3TC1Q8TE82 1336 aa24.08■■□□□ 1.45
GTF3C5-201ENST00000342018 APBB1O00213 710 aa24.08■■□□□ 1.44
GTF3C5-201ENST00000342018 FOXO4P98177 505 aa24.08■■□□□ 1.44
GTF3C5-201ENST00000342018 LMBR1LQ6UX01 489 aa24.08■■□□□ 1.44
GTF3C5-201ENST00000342018 SKAP1Q86WV1 359 aa24.08■■□□□ 1.44
GTF3C5-201ENST00000342018 BCL11AQ9H165 835 aa24.08■■□□□ 1.44
GTF3C5-201ENST00000342018 GTF2E1P29083 439 aaPredicted RBP24.07■■□□□ 1.44
GTF3C5-201ENST00000342018 SSH3Q8TE77 659 aa24.07■■□□□ 1.44
GTF3C5-201ENST00000342018 UPF1Q92900 1129 aaKnown RBP eCLIP24.07■■□□□ 1.443e-8■■■■□ 20.9
GTF3C5-201ENST00000342018 CCDC85AQ96PX6 553 aaPredicted RBP24.07■■□□□ 1.44
GTF3C5-201ENST00000342018 CDHR2Q9BYE9 1310 aa24.07■■□□□ 1.44
GTF3C5-201ENST00000342018 HCLS1P14317 486 aaPredicted RBP24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 MTX1Q13505 466 aa24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 NFIXQ14938 502 aa24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 NBPF5PQ86XG9 351 aaPredicted RBP24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 NPHP1O15259 732 aa24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 POLA2Q14181 598 aa24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 SMC5Q8IY18 1101 aa24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 DCTPP1Q9H773 170 aa24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 EXOC6BQ9Y2D4 811 aa24.06■■□□□ 1.44
GTF3C5-201ENST00000342018 GCC1Q96CN9 775 aa24.05■■□□□ 1.44
GTF3C5-201ENST00000342018 RABL6Q3YEC7 729 aaPredicted RBP24.04■■□□□ 1.44
GTF3C5-201ENST00000342018 ERFEQ4G0M1 354 aa24.04■■□□□ 1.44
GTF3C5-201ENST00000342018 ANKRD45Q5TZF3 282 aa24.04■■□□□ 1.44
GTF3C5-201ENST00000342018 CCDC24Q8N4L8 307 aa24.04■■□□□ 1.44
GTF3C5-201ENST00000342018 PDZRN3Q9UPQ7 1066 aa24.04■■□□□ 1.44
GTF3C5-201ENST00000342018 PA2G4Q9UQ80 394 aaKnown RBP24.04■■□□□ 1.44
GTF3C5-201ENST00000342018 SURF6O75683 361 aaKnown RBP24.03■■□□□ 1.44
GTF3C5-201ENST00000342018 NYXQ9GZU5 481 aa24.03■■□□□ 1.44
GTF3C5-201ENST00000342018 PDE8AO60658 829 aa24.02■■□□□ 1.44
GTF3C5-201ENST00000342018 MSL1Q68DK7 614 aa24.02■■□□□ 1.44
GTF3C5-201ENST00000342018 KLHDC4Q8TBB5 520 aa24.02■■□□□ 1.44
GTF3C5-201ENST00000342018 PLA2G12BQ9BX93 195 aa24.02■■□□□ 1.44
GTF3C5-201ENST00000342018 CARMIL3Q8ND23 1372 aa24.02■■□□□ 1.44
GTF3C5-201ENST00000342018 CTSWP56202 376 aa24.01■■□□□ 1.43
GTF3C5-201ENST00000342018 TPTE2Q6XPS3 522 aa24.01■■□□□ 1.43
GTF3C5-201ENST00000342018 SIL1Q9H173 461 aa24■■□□□ 1.43
GTF3C5-201ENST00000342018 COL24A1Q17RW2 1714 aa24■■□□□ 1.43
GTF3C5-201ENST00000342018 OS9Q13438 667 aaPredicted RBP24■■□□□ 1.43
GTF3C5-201ENST00000342018 FAM161AQ3B820 660 aa24■■□□□ 1.43
GTF3C5-201ENST00000342018 TM4SF1P30408 202 aa23.99■■□□□ 1.43
GTF3C5-201ENST00000342018 NLGN1Q8N2Q7 840 aa23.99■■□□□ 1.43
GTF3C5-201ENST00000342018 LNPKQ9C0E8 428 aa23.99■■□□□ 1.43
GTF3C5-201ENST00000342018 RGS3P49796 1198 aa23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 TTLL11Q8NHH1 800 aa23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 ZBTB47Q9UFB7 747 aaPredicted RBP23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 ABCC12Q96J65 1359 aa23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 SERPINB2P05120 415 aa23.98■■□□□ 1.43
GTF3C5-201ENST00000342018 NUCB1Q02818 461 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms