RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 ADAM33Q9BZ11 813 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 ZNF646O15015 1829 aaPredicted RBP4.72□□□□□ -1.65
CCDC66-202ENST00000341455 CEMIPQ8WUJ3 1361 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 PPP1R37O75864 691 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 NGEFQ8N5V2 710 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 STK17AQ9UEE5 414 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 SSFA2P28290 1259 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 PDE4DQ08499 809 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 FLIIQ13045 1269 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 ZNF827Q17R98 1081 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 PPP1R15BQ5SWA1 713 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 KRI1Q8N9T8 703 aaKnown RBP4.72□□□□□ -1.65
CCDC66-202ENST00000341455 HHIPL1Q96JK4 782 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 FAM117AQ9C073 453 aa4.72□□□□□ -1.65
CCDC66-202ENST00000341455 KDM2BQ8NHM5 1336 aa4.71□□□□□ -1.65
CCDC66-202ENST00000341455 TRIM66O15016 1216 aa4.71□□□□□ -1.66
CCDC66-202ENST00000341455 GGCXP38435 758 aa4.71□□□□□ -1.66
CCDC66-202ENST00000341455 ZFRQ96KR1 1074 aaKnown RBP4.71□□□□□ -1.66
CCDC66-202ENST00000341455 PASKQ96RG2 1323 aa4.71□□□□□ -1.66
CCDC66-202ENST00000341455 HTATSF1O43719 755 aaKnown RBP4.71□□□□□ -1.66
CCDC66-202ENST00000341455 CAPN2P17655 700 aa4.71□□□□□ -1.66
CCDC66-202ENST00000341455 CTCFP49711 727 aaPredicted RBP4.71□□□□□ -1.66
CCDC66-202ENST00000341455 DCAF5Q96JK2 942 aa4.71□□□□□ -1.66
CCDC66-202ENST00000341455 PLEKHF1Q96S99 279 aa4.71□□□□□ -1.66
CCDC66-202ENST00000341455 TRAIPQ9BWF2 469 aa4.71□□□□□ -1.66
CCDC66-202ENST00000341455 CACNA1FO60840 1977 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 PRR20EP86478 221 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 PRR20CP86479 221 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 PRR20DP86480 221 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 PRR20BP86481 221 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 PRR20AP86496 221 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 EIF4A2Q14240 407 aaKnown RBP4.7□□□□□ -1.66
CCDC66-202ENST00000341455 LARP1Q6PKG0 1096 aaKnown RBP4.7□□□□□ -1.66
CCDC66-202ENST00000341455 TMC1Q8TDI8 760 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 CLUAP1Q96AJ1 413 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-202ENST00000341455 WWC3Q9ULE0 1092 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 LAMB2P55268 1798 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 HEG1Q9ULI3 1381 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 ANKRD31Q8N7Z5 1873 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 CA12O43570 354 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 TRAK2O60296 914 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 CCDC27Q2M243 656 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 MORC1Q86VD1 984 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 GGNBP2Q9H3C7 697 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 BABAM1Q9NWV8 329 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 MTMR7Q9Y216 660 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 COL11A2P13942 1736 aaPredicted RBP4.7□□□□□ -1.66
CCDC66-202ENST00000341455 TRIM6-TRIM34B2RNG4 842 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 GPR162Q16538 588 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 RC3H1Q5TC82 1133 aaKnown RBP4.7□□□□□ -1.66
CCDC66-202ENST00000341455 AEBP1Q8IUX7 1158 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 ANKRD24Q8TF21 1146 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 LRCH3Q96II8 777 aa4.7□□□□□ -1.66
CCDC66-202ENST00000341455 LRRC37AA6NMS7 1700 aa4.69□□□□□ -1.66
CCDC66-202ENST00000341455 NOM1Q5C9Z4 860 aaKnown RBP4.69□□□□□ -1.66
CCDC66-202ENST00000341455 TJAP1Q5JTD0 557 aa4.69□□□□□ -1.66
CCDC66-202ENST00000341455 RBM26Q5T8P6 1007 aaKnown RBP4.69□□□□□ -1.66
CCDC66-202ENST00000341455 COL13A1Q5TAT6 717 aaPredicted RBP4.69□□□□□ -1.66
CCDC66-202ENST00000341455 TREML4Q6UXN2 200 aa4.69□□□□□ -1.66
CCDC66-202ENST00000341455 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.69□□□□□ -1.66
CCDC66-202ENST00000341455 ANKRD36CQ5JPF3 1778 aa4.69□□□□□ -1.66
CCDC66-202ENST00000341455 FCHSD2O94868 740 aa4.69□□□□□ -1.66
CCDC66-202ENST00000341455 ZNF428Q96B54 188 aa4.69□□□□□ -1.66
CCDC66-202ENST00000341455 NUTM2FA1L443 756 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 XPCQ01831 940 aaPredicted RBP4.68□□□□□ -1.66
CCDC66-202ENST00000341455 AMOTQ4VCS5 1084 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 GPIHBP1Q8IV16 184 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC66-202ENST00000341455 EMILIN1Q9Y6C2 1016 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 SOS1Q07889 1333 aaPredicted RBP4.68□□□□□ -1.66
CCDC66-202ENST00000341455 ZNF521Q96K83 1311 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 PCDH11XQ9BZA7 1347 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 PCDH11YQ9BZA8 1340 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 CNTNAP4Q9C0A0 1308 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 A6NJR5 290 aa4.68□□□□□ -1.66
CCDC66-202ENST00000341455 SMARCC1Q92922 1105 aaPredicted RBP4.68□□□□□ -1.66
CCDC66-202ENST00000341455 RASSF10A6NK89 507 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 ZNF775Q96BV0 537 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 EYA1Q99502 592 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 PNNQ9H307 717 aaKnown RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 IL16Q14005 1332 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 PSME4Q14997 1843 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 ZBTB7AO95365 584 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 IL2RBP14784 551 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 MTHFSP49914 203 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 NBPF6Q5VWK0 638 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 CABLES1Q8TDN4 633 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 PNISRQ8TF01 805 aaKnown RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 NBPF4Q96M43 638 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 PRKD2Q9BZL6 878 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 SAGE1Q9NXZ1 904 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 DIAPH1O60610 1272 aaKnown RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 HSPA1AP0DMV8 641 aaKnown RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 HSPA1BP0DMV9 641 aaKnown RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 HSP90AB2PQ58FF8 381 aa4.67□□□□□ -1.66
CCDC66-202ENST00000341455 PRPF38BQ5VTL8 546 aaKnown RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 FOXD4L5Q5VV16 416 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 FOXD4L4Q8WXT5 416 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-202ENST00000341455 CFAP53Q96M91 514 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms