RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ZCRB1Q8TBF4 217 aaKnown RBP24.27■■□□□ 1.48
SPG7-202ENST00000341316 RUFY2Q8WXA3 655 aa24.27■■□□□ 1.48
SPG7-202ENST00000341316 PARP4Q9UKK3 1724 aaKnown RBP24.26■■□□□ 1.47
SPG7-202ENST00000341316 CPA1P15085 419 aa24.26■■□□□ 1.47
SPG7-202ENST00000341316 FAM227BQ96M60 508 aa24.26■■□□□ 1.47
SPG7-202ENST00000341316 LARP6Q9BRS8 491 aaKnown RBP24.26■■□□□ 1.47
SPG7-202ENST00000341316 BOLA2Q9H3K6 86 aa24.26■■□□□ 1.47
SPG7-202ENST00000341316 ZNF335Q9H4Z2 1342 aaPredicted RBP24.26■■□□□ 1.47
SPG7-202ENST00000341316 COL5A2P05997 1499 aaPredicted RBP24.26■■□□□ 1.47
SPG7-202ENST00000341316 SLAIN2Q9P270 581 aa24.26■■□□□ 1.47
SPG7-202ENST00000341316 ARFGEF2Q9Y6D5 1785 aa24.25■■□□□ 1.47
SPG7-202ENST00000341316 AK2P54819 239 aa24.25■■□□□ 1.47
SPG7-202ENST00000341316 COPRSQ9NQ92 184 aa24.25■■□□□ 1.47
SPG7-202ENST00000341316 PCDH11XQ9BZA7 1347 aa24.25■■□□□ 1.47
SPG7-202ENST00000341316 PCDH11YQ9BZA8 1340 aa24.25■■□□□ 1.47
SPG7-202ENST00000341316 NASPP49321 788 aaPredicted RBP24.24■■□□□ 1.47
SPG7-202ENST00000341316 PTPN12Q05209 780 aaKnown RBP24.24■■□□□ 1.47
SPG7-202ENST00000341316 GPT2Q8TD30 523 aa24.24■■□□□ 1.47
SPG7-202ENST00000341316 A0A087WZG4 1122 aa24.24■■□□□ 1.47
SPG7-202ENST00000341316 CASP7P55210 303 aa24.24■■□□□ 1.47
SPG7-202ENST00000341316 RABL6Q3YEC7 729 aaPredicted RBP24.24■■□□□ 1.47
SPG7-202ENST00000341316 RUFY3Q7L099 469 aa24.24■■□□□ 1.47
SPG7-202ENST00000341316 PLBD2Q8NHP8 589 aa24.24■■□□□ 1.47
SPG7-202ENST00000341316 NMIQ13287 307 aaPredicted RBP24.23■■□□□ 1.47
SPG7-202ENST00000341316 ADCK5Q3MIX3 580 aa24.23■■□□□ 1.47
SPG7-202ENST00000341316 CAVIN1Q6NZI2 390 aaKnown RBP24.23■■□□□ 1.47
SPG7-202ENST00000341316 NCLP19338 710 aaKnown RBP24.23■■□□□ 1.47
SPG7-202ENST00000341316 PRPF40BQ6NWY9 871 aaKnown RBP24.23■■□□□ 1.47
SPG7-202ENST00000341316 LAMB4A4D0S4 1761 aa24.23■■□□□ 1.47
SPG7-202ENST00000341316 AFDNP55196 1824 aaKnown RBP24.22■■□□□ 1.47
SPG7-202ENST00000341316 CCDC173Q0VFZ6 552 aa24.22■■□□□ 1.47
SPG7-202ENST00000341316 CASTP20810 708 aaKnown RBP24.22■■□□□ 1.47
SPG7-202ENST00000341316 TTLL7Q6ZT98 887 aa24.21■■□□□ 1.47
SPG7-202ENST00000341316 KCNB2Q92953 911 aa24.21■■□□□ 1.47
SPG7-202ENST00000341316 CCDC171Q6TFL3 1326 aa24.21■■□□□ 1.47
SPG7-202ENST00000341316 COL15A1P39059 1388 aa24.21■■□□□ 1.47
SPG7-202ENST00000341316 STRCQ7RTU9 1775 aa24.21■■□□□ 1.47
SPG7-202ENST00000341316 TFCP2Q12800 502 aa24.21■■□□□ 1.47
SPG7-202ENST00000341316 NECTIN1Q15223 517 aa24.21■■□□□ 1.47
SPG7-202ENST00000341316 EDC3Q96F86 508 aaKnown RBP24.21■■□□□ 1.47
SPG7-202ENST00000341316 A0A0D9SFI3 127 aa24.2■■□□□ 1.46
SPG7-202ENST00000341316 ERVV-2B6SEH9 535 aa24.2■■□□□ 1.46
SPG7-202ENST00000341316 A1BGP04217 495 aa24.2■■□□□ 1.46
SPG7-202ENST00000341316 DDX54Q8TDD1 881 aaKnown RBP24.2■■□□□ 1.46
SPG7-202ENST00000341316 PPP1R9BQ96SB3 815 aa24.2■■□□□ 1.46
SPG7-202ENST00000341316 DBNLQ9UJU6 430 aaKnown RBP24.2■■□□□ 1.46
SPG7-202ENST00000341316 NSFL1CQ9UNZ2 370 aaKnown RBP24.2■■□□□ 1.46
SPG7-202ENST00000341316 KCPQ6ZWJ8 1503 aa24.19■■□□□ 1.46
SPG7-202ENST00000341316 IL2RBP14784 551 aa24.19■■□□□ 1.46
SPG7-202ENST00000341316 ZNF445P59923 1031 aa24.19■■□□□ 1.46
SPG7-202ENST00000341316 NKX1-1Q15270 411 aaPredicted RBP24.19■■□□□ 1.46
SPG7-202ENST00000341316 ZSCAN23Q3MJ62 389 aa24.19■■□□□ 1.46
SPG7-202ENST00000341316 JAKMIP1Q96N16 626 aaKnown RBP24.19■■□□□ 1.46
SPG7-202ENST00000341316 STRN4Q9NRL3 753 aa24.19■■□□□ 1.46
SPG7-202ENST00000341316 RBM27Q9P2N5 1060 aaKnown RBP24.19■■□□□ 1.46
SPG7-202ENST00000341316 LIMCH1Q9UPQ0 1083 aa24.19■■□□□ 1.46
SPG7-202ENST00000341316 LARGE1O95461 756 aa24.18■■□□□ 1.46
SPG7-202ENST00000341316 TNNI3KQ59H18 835 aa24.18■■□□□ 1.46
SPG7-202ENST00000341316 FSD1Q9BTV5 496 aa24.18■■□□□ 1.46
SPG7-202ENST00000341316 CARD10Q9BWT7 1032 aa24.18■■□□□ 1.46
SPG7-202ENST00000341316 SNRKQ9NRH2 765 aa24.18■■□□□ 1.46
SPG7-202ENST00000341316 RBM8AQ9Y5S9 174 aaKnown RBP24.18■■□□□ 1.46
SPG7-202ENST00000341316 FPGT-TNNI3KV9GXZ4 949 aa24.18■■□□□ 1.46
SPG7-202ENST00000341316 RPAP1Q9BWH6 1393 aaPredicted RBP24.18■■□□□ 1.46
SPG7-202ENST00000341316 COL9A3Q14050 684 aaPredicted RBP24.18■■□□□ 1.46
SPG7-202ENST00000341316 MAP4K1Q92918 833 aa24.18■■□□□ 1.46
SPG7-202ENST00000341316 KDM4FA0A1W2PPD8 638 aa24.17■■□□□ 1.46
SPG7-202ENST00000341316 FOXO4P98177 505 aa24.17■■□□□ 1.46
SPG7-202ENST00000341316 LMBR1LQ6UX01 489 aa24.17■■□□□ 1.46
SPG7-202ENST00000341316 UBR2Q8IWV8 1755 aa24.17■■□□□ 1.46
SPG7-202ENST00000341316 HIP1O00291 1037 aa24.17■■□□□ 1.46
SPG7-202ENST00000341316 ZSWIM6Q9HCJ5 1215 aa24.17■■□□□ 1.46
SPG7-202ENST00000341316 NDUFB9Q9Y6M9 179 aa24.17■■□□□ 1.46
SPG7-202ENST00000341316 H7C1W4 665 aa24.16■■□□□ 1.46
SPG7-202ENST00000341316 CREB3L3Q68CJ9 461 aa24.16■■□□□ 1.46
SPG7-202ENST00000341316 ANP32BQ92688 251 aaKnown RBP24.16■■□□□ 1.46
SPG7-202ENST00000341316 FOXD4L6Q3SYB3 417 aaPredicted RBP24.15■■□□□ 1.46
SPG7-202ENST00000341316 FOXD4L3Q6VB84 417 aaPredicted RBP24.15■■□□□ 1.46
SPG7-202ENST00000341316 ABCA3Q99758 1704 aa24.15■■□□□ 1.46
SPG7-202ENST00000341316 SHANK3Q9BYB0 1731 aa24.15■■□□□ 1.46
SPG7-202ENST00000341316 UBE2Q2Q8WVN8 375 aa24.15■■□□□ 1.46
SPG7-202ENST00000341316 TM6SF1Q9BZW5 370 aa24.15■■□□□ 1.46
SPG7-202ENST00000341316 PDRG1Q9NUG6 133 aa24.15■■□□□ 1.46
SPG7-202ENST00000341316 MED23Q9ULK4 1368 aa24.14■■□□□ 1.46
SPG7-202ENST00000341316 DTNBO60941 627 aa24.14■■□□□ 1.46
SPG7-202ENST00000341316 ATP5JP18859 108 aa24.14■■□□□ 1.46
SPG7-202ENST00000341316 ZNF589Q86UQ0 364 aaPredicted RBP24.14■■□□□ 1.46
SPG7-202ENST00000341316 VPS53Q5VIR6 699 aa24.14■■□□□ 1.45
SPG7-202ENST00000341316 DBNDD2Q9BQY9 259 aa24.14■■□□□ 1.45
SPG7-202ENST00000341316 ZBTB3Q9H5J0 574 aa24.14■■□□□ 1.45
SPG7-202ENST00000341316 PAPPAQ13219 1627 aa24.14■■□□□ 1.45
SPG7-202ENST00000341316 TMEM63CQ9P1W3 806 aa24.13■■□□□ 1.45
SPG7-202ENST00000341316 TAF6LQ9Y6J9 622 aa24.13■■□□□ 1.45
SPG7-202ENST00000341316 SLC27A2O14975 620 aa24.13■■□□□ 1.45
SPG7-202ENST00000341316 CHGBP05060 677 aa24.13■■□□□ 1.45
SPG7-202ENST00000341316 CYP46A1Q9Y6A2 500 aa24.13■■□□□ 1.45
SPG7-202ENST00000341316 WDR33Q9C0J8 1336 aaKnown RBP24.12■■□□□ 1.45
SPG7-202ENST00000341316 KCNJ4P48050 445 aa24.12■■□□□ 1.45
SPG7-202ENST00000341316 CWC25Q9NXE8 425 aaPredicted RBP24.12■■□□□ 1.45
SPG7-202ENST00000341316 NUP188Q5SRE5 1749 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms