RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 USO1O60763 962 aaKnown RBP13.13□□□□□ -0.31
TNC-201ENST00000341037 TBC1D9Q6ZT07 1266 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
TNC-201ENST00000341037 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 ECHDC1Q9NTX5 307 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 TCP11L1Q9NUJ3 509 aa13.13□□□□□ -0.31
TNC-201ENST00000341037 IQSEC3Q9UPP2 1182 aaPredicted RBP13.13□□□□□ -0.31
TNC-201ENST00000341037 ESPNB1AK53 854 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
TNC-201ENST00000341037 GRM1Q13255 1194 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 ACEP12821 1306 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 PICALMQ13492 652 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 NCOA7Q8NI08 942 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
TNC-201ENST00000341037 NEK1Q96PY6 1258 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
TNC-201ENST00000341037 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 CUL7Q14999 1698 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 TSPY3P0CV98 308 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 TSPY8P0CW00 308 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 AMPD3Q01432 767 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 TTC16Q8NEE8 873 aa13.12□□□□□ -0.31
TNC-201ENST00000341037 KIF20AO95235 890 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 IDI1Q13907 227 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 STX1AQ16623 288 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 TEX13AQ9BXU3 409 aaPredicted RBP13.11□□□□□ -0.31
TNC-201ENST00000341037 CRNKL1Q9BZJ0 848 aaKnown RBP13.11□□□□□ -0.31
TNC-201ENST00000341037 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 CTAGE5O15320 804 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 MYO1BO43795 1136 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 WWC3Q9ULE0 1092 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 GBP3Q9H0R5 595 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
TNC-201ENST00000341037 LDHCP07864 332 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
TNC-201ENST00000341037 COMMD10Q9Y6G5 202 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 STX6O43752 255 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
TNC-201ENST00000341037 SNRPA1P09661 255 aaKnown RBP13.1□□□□□ -0.31
TNC-201ENST00000341037 SHTN1A0MZ66 631 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 GSTO1P78417 241 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 MAP9Q49MG5 647 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 HOOK3Q86VS8 718 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 NOP2P46087 812 aaKnown RBP13.1□□□□□ -0.31
TNC-201ENST00000341037 KIF18AQ8NI77 898 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
TNC-201ENST00000341037 NCOA1Q15788 1441 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 SLC4A4Q9Y6R1 1079 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 TBC1D2Q9BYX2 928 aa13.1□□□□□ -0.31
TNC-201ENST00000341037 TTC22Q5TAA0 569 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 CYP7A1P22680 504 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 CETN1Q12798 172 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 C16orf45Q96MC5 204 aaPredicted RBP13.09□□□□□ -0.31
TNC-201ENST00000341037 EXOC1Q9NV70 894 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 GCOM1H8Y6P7 765 aaPredicted RBP13.09□□□□□ -0.31
TNC-201ENST00000341037 MYZAPP0CAP1 466 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 HEATR3Q7Z4Q2 680 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 ZSCAN30Q86W11 494 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 PAFAH1B1P43034 410 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 IFIT1BQ5T764 474 aaKnown RBP13.09□□□□□ -0.31
TNC-201ENST00000341037 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 CBX1P83916 185 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 WTAPQ15007 396 aa13.09□□□□□ -0.31
TNC-201ENST00000341037 HLTFQ14527 1009 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNC-201ENST00000341037 HMGXB3Q12766 1538 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 POLR3GO15318 223 aaPredicted RBP13.08□□□□□ -0.32
TNC-201ENST00000341037 AFMP43652 599 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
TNC-201ENST00000341037 FAM114A1Q8IWE2 563 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 KIF2AO00139 706 aaPredicted RBP13.08□□□□□ -0.32
TNC-201ENST00000341037 STXBP4Q6ZWJ1 553 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
TNC-201ENST00000341037 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 UBA7P41226 1012 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
TNC-201ENST00000341037 UQCRFS1P1P0C7P4 283 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 MCM3P25205 808 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 XAGE3Q8WTP9 111 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 INCENPQ9NQS7 918 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 ADCY5O95622 1261 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 LMAN1P49257 510 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 IGHDP01880 384 aa13.07□□□□□ -0.32
TNC-201ENST00000341037 RNF187Q5TA31 235 aaPredicted RBP13.07□□□□□ -0.32
TNC-201ENST00000341037 ZCRB1Q8TBF4 217 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms