RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 CCDC82Q8N4S0 544 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 TSC1Q92574 1164 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 GTPBP4Q9BZE4 634 aaKnown RBP17.23■□□□□ 0.35
RRP1B-201ENST00000340648 USP19O94966 1318 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 CCDC181Q5TID7 509 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 DEF6Q9H4E7 631 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 SOS1Q07889 1333 aaPredicted RBP17.23■□□□□ 0.35
RRP1B-201ENST00000340648 JAKMIP3Q5VZ66 844 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 ZSWIM4Q9H7M6 989 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
RRP1B-201ENST00000340648 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
RRP1B-201ENST00000340648 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 NPHP3Q7Z494 1330 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 WASF1Q92558 559 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 A0A087WZG4 1122 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 RIOK3O14730 519 aaKnown RBP17.22■□□□□ 0.35
RRP1B-201ENST00000340648 STIM1Q13586 685 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 DNAI1Q9UI46 699 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 ABCC10Q5T3U5 1492 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 GNG11P61952 73 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 Q6ZUG5 572 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 AIDAQ96BJ3 306 aa17.22■□□□□ 0.35
RRP1B-201ENST00000340648 CREB3L3Q68CJ9 461 aa17.21■□□□□ 0.35
RRP1B-201ENST00000340648 GPT2Q8TD30 523 aa17.21■□□□□ 0.35
RRP1B-201ENST00000340648 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
RRP1B-201ENST00000340648 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
RRP1B-201ENST00000340648 FAM173BQ6P4H8 233 aa17.21■□□□□ 0.35
RRP1B-201ENST00000340648 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
RRP1B-201ENST00000340648 SLU7O95391 586 aaKnown RBP17.21■□□□□ 0.35
RRP1B-201ENST00000340648 RDXP35241 583 aaKnown RBP17.21■□□□□ 0.35
RRP1B-201ENST00000340648 ZNF213O14771 459 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 AMOTQ4VCS5 1084 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 KIAA1328Q86T90 577 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 BRD1O95696 1058 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 GBP3Q9H0R5 595 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 SNRKQ9NRH2 765 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 HSP90AA4PQ58FG1 418 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 RUFY3Q7L099 469 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 UBE3BQ7Z3V4 1068 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 NCKAP5LQ9HCH0 1330 aa17.2■□□□□ 0.34
RRP1B-201ENST00000340648 ZNF500O60304 480 aaPredicted RBP17.2■□□□□ 0.34
RRP1B-201ENST00000340648 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
RRP1B-201ENST00000340648 MRPS27Q92552 414 aaKnown RBP17.19■□□□□ 0.34
RRP1B-201ENST00000340648 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 ABCC1P33527 1531 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 KIAA0754O94854 1291 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 U2AF2P26368 475 aaKnown RBP eCLIP17.19■□□□□ 0.348e-9■■■■□ 20.4
RRP1B-201ENST00000340648 IL13P35225 146 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 METTL24Q5JXM2 366 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 CDK5RAP3Q96JB5 506 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 TIGD1Q96MW7 591 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 BCORL1Q5H9F3 1711 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 EIF5P55010 431 aaKnown RBP17.19■□□□□ 0.34
RRP1B-201ENST00000340648 CEP131Q9UPN4 1083 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 CCDC148Q8NFR7 591 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 CRACR2AQ9BSW2 395 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
RRP1B-201ENST00000340648 UBASH3AP57075 661 aa17.18■□□□□ 0.34
RRP1B-201ENST00000340648 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
RRP1B-201ENST00000340648 LMAN1P49257 510 aa17.18■□□□□ 0.34
RRP1B-201ENST00000340648 ZNF397Q8NF99 534 aaPredicted RBP17.18■□□□□ 0.34
RRP1B-201ENST00000340648 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
RRP1B-201ENST00000340648 CENPHQ9H3R5 247 aa17.18■□□□□ 0.34
RRP1B-201ENST00000340648 PHAXQ9H814 394 aaKnown RBP17.18■□□□□ 0.34
RRP1B-201ENST00000340648 NPATQ14207 1427 aa17.18■□□□□ 0.34
RRP1B-201ENST00000340648 PROSER2Q86WR7 435 aaPredicted RBP17.17■□□□□ 0.34
RRP1B-201ENST00000340648 CCDC12Q8WUD4 166 aaPredicted RBP17.17■□□□□ 0.34
RRP1B-201ENST00000340648 ABCC4O15439 1325 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 PNMA6EA0A0J9YXQ4 647 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 ZFP91Q96JP5 570 aaPredicted RBP17.17■□□□□ 0.34
RRP1B-201ENST00000340648 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 OGFRQ9NZT2 677 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 AKAP2Q9Y2D5 859 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 GOLGA8AA7E2F4 631 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
RRP1B-201ENST00000340648 MPHOSPH8Q99549 860 aa17.17■□□□□ 0.34
RRP1B-201ENST00000340648 SYKP43405 635 aa17.16■□□□□ 0.34
RRP1B-201ENST00000340648 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
RRP1B-201ENST00000340648 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
RRP1B-201ENST00000340648 FEZ1Q99689 392 aa17.16■□□□□ 0.34
RRP1B-201ENST00000340648 IQCEQ6IPM2 695 aa17.16■□□□□ 0.34
RRP1B-201ENST00000340648 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
RRP1B-201ENST00000340648 RAI14Q9P0K7 980 aa17.16■□□□□ 0.34
RRP1B-201ENST00000340648 KLF18A0A0U1RQI7 1052 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 DENND4BO75064 1496 aaPredicted RBP17.15■□□□□ 0.34
RRP1B-201ENST00000340648 NAPBQ9H115 298 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 PALD1Q9ULE6 856 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 GOLGA6L10A6NI86 522 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 GRM8O00222 908 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 CCDC102BQ68D86 513 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 SYT10Q6XYQ8 523 aa17.15■□□□□ 0.34
RRP1B-201ENST00000340648 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
RRP1B-201ENST00000340648 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms