RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 SLC5A1P13866 664 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 TICAM2Q86XR7 235 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 DCCP43146 1447 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 CHMLP26374 656 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 DHX8Q14562 1220 aaKnown RBP8.99□□□□□ -0.97
HIPK1-201ENST00000340480 PRPF40BQ6NWY9 871 aaKnown RBP8.99□□□□□ -0.97
HIPK1-201ENST00000340480 NAP1L5Q96NT1 182 aaPredicted RBP8.99□□□□□ -0.97
HIPK1-201ENST00000340480 CARD10Q9BWT7 1032 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 CCDC8Q9H0W5 538 aaPredicted RBP8.99□□□□□ -0.97
HIPK1-201ENST00000340480 WDR17Q8IZU2 1322 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 CDC5LQ99459 802 aaKnown RBP8.99□□□□□ -0.97
HIPK1-201ENST00000340480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.99□□□□□ -0.975e-6■■■■■ 31.1
HIPK1-201ENST00000340480 CFAP45Q9UL16 551 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 PLEKHG2Q9H7P9 1386 aa8.99□□□□□ -0.97
HIPK1-201ENST00000340480 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
HIPK1-201ENST00000340480 LARP1BQ659C4 914 aaKnown RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 CABLES1Q8TDN4 633 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 USP26Q9BXU7 913 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 USP44Q9H0E7 712 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 DDB1Q16531 1140 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 BRMS1Q9HCU9 246 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 ITSN1Q15811 1721 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 ADGRB2O60241 1585 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 NASPP49321 788 aaPredicted RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 STAP2Q9UGK3 403 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 BECN2A8MW95 431 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 BEND3Q5T5X7 828 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 NUTM2AQ8IVF1 878 aaPredicted RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 SCAND2PQ9GZW5 306 aaPredicted RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 TNS3Q68CZ2 1445 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 MAP3K12Q12852 859 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 LMBR1LQ6UX01 489 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 SPATA31A3Q5VYP0 1347 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 MAP4K4O95819 1239 aaPredicted RBP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 FKBP4Q02790 459 aaKnown RBP eCLIP8.98□□□□□ -0.97
HIPK1-201ENST00000340480 CCDC173Q0VFZ6 552 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 WASF1Q92558 559 aa8.98□□□□□ -0.97
HIPK1-201ENST00000340480 C1orf167Q5SNV9 1468 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 GCKRQ14397 625 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 UPF3BQ9BZI7 483 aaKnown RBP8.97□□□□□ -0.97
HIPK1-201ENST00000340480 DNAJC5Q9H3Z4 198 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 PES1O00541 588 aaKnown RBP8.97□□□□□ -0.97
HIPK1-201ENST00000340480 SASS6Q6UVJ0 657 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 ZNF496Q96IT1 587 aaPredicted RBP8.97□□□□□ -0.97
HIPK1-201ENST00000340480 CCDC70Q6NSX1 233 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 TRIM22Q8IYM9 498 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 TNPO1Q92973 898 aaKnown RBP8.97□□□□□ -0.97
HIPK1-201ENST00000340480 NAT10Q9H0A0 1025 aaKnown RBP8.97□□□□□ -0.97
HIPK1-201ENST00000340480 PARP10Q53GL7 1025 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 LDHAL6AQ6ZMR3 332 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 ANKRD20A12PQ8NF67 263 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 ATP5J2-PTCD1G3V325 749 aa8.97□□□□□ -0.97
HIPK1-201ENST00000340480 CAVIN1Q6NZI2 390 aaKnown RBP8.97□□□□□ -0.97
HIPK1-201ENST00000340480 KLHL40Q2TBA0 621 aa8.96□□□□□ -0.97
HIPK1-201ENST00000340480 AIDAQ96BJ3 306 aa8.96□□□□□ -0.97
HIPK1-201ENST00000340480 CWF19L2Q2TBE0 894 aaKnown RBP8.96□□□□□ -0.97
HIPK1-201ENST00000340480 RNF41Q9H4P4 317 aaPredicted RBP8.96□□□□□ -0.97
HIPK1-201ENST00000340480 TSPY26PQ9H489 355 aa8.96□□□□□ -0.97
HIPK1-201ENST00000340480 SETD1BQ9UPS6 1966 aaKnown RBP8.96□□□□□ -0.98
HIPK1-201ENST00000340480 CCDC152Q4G0S7 254 aa8.96□□□□□ -0.98
HIPK1-201ENST00000340480 KIF20BQ96Q89 1820 aa8.96□□□□□ -0.98
HIPK1-201ENST00000340480 OVOS2A0A0G2JMS6 1433 aa8.96□□□□□ -0.98
HIPK1-201ENST00000340480 CRB1P82279 1406 aa8.96□□□□□ -0.98
HIPK1-201ENST00000340480 PXDNLA1KZ92 1463 aa8.96□□□□□ -0.98
HIPK1-201ENST00000340480 CAVIN4Q5BKX8 364 aa8.96□□□□□ -0.98
HIPK1-201ENST00000340480 PAF1Q8N7H5 531 aa8.96□□□□□ -0.98
HIPK1-201ENST00000340480 LMTK3Q96Q04 1460 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 NGLY1Q96IV0 654 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 EYA2O00167 538 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 KINO60870 393 aaKnown RBP8.95□□□□□ -0.98
HIPK1-201ENST00000340480 ATP2B3Q16720 1220 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 TMX3Q96JJ7 454 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 C16orf71Q8IYS4 520 aaPredicted RBP8.95□□□□□ -0.98
HIPK1-201ENST00000340480 CCDC196A0A1B0GTZ2 297 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 ZPR1O75312 459 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 MTX1Q13505 466 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 RAB3GAP1Q15042 981 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 MCMDC2Q4G0Z9 681 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 BICC1Q9H694 974 aaKnown RBP8.95□□□□□ -0.98
HIPK1-201ENST00000340480 CCDC39Q9UFE4 941 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 FER1L4A9Z1Z3 1794 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 SGSM2O43147 1006 aa8.95□□□□□ -0.98
HIPK1-201ENST00000340480 ADAMTS2O95450 1211 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 SEC24BO95487 1268 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 TM6SF1Q9BZW5 370 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 GRPEL1Q9HAV7 217 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 PPP1R1BQ9UD71 204 aaPredicted RBP8.94□□□□□ -0.98
HIPK1-201ENST00000340480 PNMA6EA0A0J9YXQ4 647 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 FIBPO43427 364 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 IPO7O95373 1038 aaKnown RBP8.94□□□□□ -0.98
HIPK1-201ENST00000340480 NBPF7P0C2Y1 421 aaPredicted RBP8.94□□□□□ -0.98
HIPK1-201ENST00000340480 CCDC192P0DO97 292 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 BTG4Q9NY30 223 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 NEURL1BA8MQ27 555 aa8.94□□□□□ -0.98
HIPK1-201ENST00000340480 BAG4O95429 457 aaKnown RBP8.94□□□□□ -0.98
HIPK1-201ENST00000340480 RDXP35241 583 aaKnown RBP8.94□□□□□ -0.98
HIPK1-201ENST00000340480 NRKQ7Z2Y5 1582 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms