RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 ADCY9O60503 1353 aa13.18□□□□□ -0.3
UBE2D3-202ENST00000338145 FDX1P10109 184 aa13.17□□□□□ -0.3
UBE2D3-202ENST00000338145 KCNQ4P56696 695 aa13.17□□□□□ -0.3
UBE2D3-202ENST00000338145 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
UBE2D3-202ENST00000338145 IP6K1Q92551 441 aa13.17□□□□□ -0.3
UBE2D3-202ENST00000338145 USP54Q70EL1 1684 aa13.17□□□□□ -0.3
UBE2D3-202ENST00000338145 USP47Q96K76 1375 aa13.17□□□□□ -0.3
UBE2D3-202ENST00000338145 HDGFL2Q7Z4V5 671 aaPredicted RBP13.16□□□□□ -0.3
UBE2D3-202ENST00000338145 NME9Q86XW9 330 aa13.16□□□□□ -0.3
UBE2D3-202ENST00000338145 LY75O60449 1722 aa13.16□□□□□ -0.3
UBE2D3-202ENST00000338145 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
UBE2D3-202ENST00000338145 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
UBE2D3-202ENST00000338145 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
UBE2D3-202ENST00000338145 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
UBE2D3-202ENST00000338145 LTN1O94822 1766 aa13.15□□□□□ -0.31
UBE2D3-202ENST00000338145 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 CLK2P49760 499 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 PRPF38BQ5VTL8 546 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 ZNF526Q8TF50 670 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 ROCK2O75116 1388 aaKnown RBP13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 NSD2O96028 1365 aa13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 SBNO2Q9Y2G9 1366 aa13.14□□□□□ -0.31
UBE2D3-202ENST00000338145 FAM208AQ9UK61 1670 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-202ENST00000338145 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
UBE2D3-202ENST00000338145 BRICD5Q6PL45 260 aa13.13□□□□□ -0.31
UBE2D3-202ENST00000338145 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-202ENST00000338145 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
UBE2D3-202ENST00000338145 SPDYE5A6NIY4 337 aa13.12□□□□□ -0.31
UBE2D3-202ENST00000338145 NDUFV2P19404 249 aa13.12□□□□□ -0.31
UBE2D3-202ENST00000338145 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
UBE2D3-202ENST00000338145 TERF2IPQ9NYB0 399 aa13.12□□□□□ -0.31
UBE2D3-202ENST00000338145 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
UBE2D3-202ENST00000338145 ADH1BP00325 375 aa13.11□□□□□ -0.31
UBE2D3-202ENST00000338145 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
UBE2D3-202ENST00000338145 ZNF516Q92618 1163 aa13.11□□□□□ -0.31
UBE2D3-202ENST00000338145 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
UBE2D3-202ENST00000338145 TOMM70O94826 608 aa13.1□□□□□ -0.31
UBE2D3-202ENST00000338145 HLA-CQ95604 372 aa13.1□□□□□ -0.31
UBE2D3-202ENST00000338145 PCDHGC3Q9UN70 934 aa13.1□□□□□ -0.31
UBE2D3-202ENST00000338145 DOT1LQ8TEK3 1739 aa13.1□□□□□ -0.31
UBE2D3-202ENST00000338145 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
UBE2D3-202ENST00000338145 CD163L1Q9NR16 1453 aa13.1□□□□□ -0.31
UBE2D3-202ENST00000338145 MSS51Q4VC12 460 aa13.09□□□□□ -0.31
UBE2D3-202ENST00000338145 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
UBE2D3-202ENST00000338145 NSD3Q9BZ95 1437 aa13.09□□□□□ -0.31
UBE2D3-202ENST00000338145 LIMD1Q9UGP4 676 aa13.09□□□□□ -0.31
UBE2D3-202ENST00000338145 HOXC9P31274 260 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 AMPHP49418 695 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 GUCA2AQ02747 115 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 RETREG3Q86VR2 466 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 DNAJC5GQ8N7S2 189 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 SPSB2Q99619 263 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 SLC12A5Q9H2X9 1139 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
UBE2D3-202ENST00000338145 MTMR2Q13614 643 aa13.07□□□□□ -0.32
UBE2D3-202ENST00000338145 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
UBE2D3-202ENST00000338145 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
UBE2D3-202ENST00000338145 SMARCC1Q92922 1105 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-202ENST00000338145 COG3Q96JB2 828 aa13.07□□□□□ -0.32
UBE2D3-202ENST00000338145 PCMTD1Q96MG8 357 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-202ENST00000338145 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBE2D3-202ENST00000338145 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
UBE2D3-202ENST00000338145 USB1Q9BQ65 265 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-202ENST00000338145 MAP3K19Q56UN5 1328 aa13.06□□□□□ -0.32
UBE2D3-202ENST00000338145 PALLDQ8WX93 1383 aa13.06□□□□□ -0.32
UBE2D3-202ENST00000338145 C5P01031 1676 aa13.05□□□□□ -0.32
UBE2D3-202ENST00000338145 MEGF6O75095 1541 aa13.05□□□□□ -0.32
UBE2D3-202ENST00000338145 SSFA2P28290 1259 aa13.05□□□□□ -0.32
UBE2D3-202ENST00000338145 POLR3EQ9NVU0 708 aa13.05□□□□□ -0.32
UBE2D3-202ENST00000338145 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
UBE2D3-202ENST00000338145 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
UBE2D3-202ENST00000338145 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
UBE2D3-202ENST00000338145 TLL1O43897 1013 aa13.04□□□□□ -0.32
UBE2D3-202ENST00000338145 LILRB3O75022 631 aa13.04□□□□□ -0.32
UBE2D3-202ENST00000338145 TATP17735 454 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-202ENST00000338145 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
UBE2D3-202ENST00000338145 RTL1A6NKG5 1358 aa13.04□□□□□ -0.32
UBE2D3-202ENST00000338145 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
UBE2D3-202ENST00000338145 GGCXP38435 758 aa13.03□□□□□ -0.32
UBE2D3-202ENST00000338145 TGFB2P61812 414 aa13.03□□□□□ -0.32
UBE2D3-202ENST00000338145 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
UBE2D3-202ENST00000338145 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
UBE2D3-202ENST00000338145 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
UBE2D3-202ENST00000338145 SMG6Q86US8 1419 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-202ENST00000338145 CICQ96RK0 1608 aaPredicted RBP13.02□□□□□ -0.32
UBE2D3-202ENST00000338145 PPP2R2DQ66LE6 453 aa13.02□□□□□ -0.33
UBE2D3-202ENST00000338145 DESI1Q6ICB0 168 aa13.02□□□□□ -0.33
UBE2D3-202ENST00000338145 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
UBE2D3-202ENST00000338145 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
UBE2D3-202ENST00000338145 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
UBE2D3-202ENST00000338145 WWC3Q9ULE0 1092 aa13.01□□□□□ -0.33
UBE2D3-202ENST00000338145 C4BP0C0L5 1744 aa13.01□□□□□ -0.33
UBE2D3-202ENST00000338145 TAF1LQ8IZX4 1826 aa13.01□□□□□ -0.33
UBE2D3-202ENST00000338145 FSTL1Q12841 308 aa13□□□□□ -0.33
UBE2D3-202ENST00000338145 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
UBE2D3-202ENST00000338145 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
UBE2D3-202ENST00000338145 JMYQ8N9B5 988 aa13□□□□□ -0.33
UBE2D3-202ENST00000338145 KLRG1Q96E93 195 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms