RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CDCA7Q9BWT1 371 aaPredicted RBP14.13□□□□□ -0.15
FN1-202ENST00000336916 IFIT3O14879 490 aaKnown RBP14.13□□□□□ -0.15
FN1-202ENST00000336916 HOOK2Q96ED9 719 aa14.13□□□□□ -0.15
FN1-202ENST00000336916 CCDC174Q6PII3 467 aa14.13□□□□□ -0.15
FN1-202ENST00000336916 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
FN1-202ENST00000336916 PAFAH1B1P43034 410 aa14.13□□□□□ -0.15
FN1-202ENST00000336916 FAM107BQ9H098 131 aa14.13□□□□□ -0.15
FN1-202ENST00000336916 NBPF6Q5VWK0 638 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 NBPF5PQ86XG9 351 aaPredicted RBP14.12□□□□□ -0.15
FN1-202ENST00000336916 TBC1D5Q92609 795 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 NBPF4Q96M43 638 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 NLRP5P59047 1200 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 LIMCH1Q9UPQ0 1083 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 PUS7Q96PZ0 661 aaKnown RBP14.12□□□□□ -0.15
FN1-202ENST00000336916 HOMER2Q9NSB8 354 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 NOS1P29475 1434 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 SSX2IPQ9Y2D8 614 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 TMEM57Q8N5G2 664 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 TAF3Q5VWG9 929 aa14.12□□□□□ -0.15
FN1-202ENST00000336916 ASXL2Q76L83 1435 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 MCM5P33992 734 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 CTNNA2P26232 953 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 KIF18AQ8NI77 898 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 GOLGA8BA8MQT2 603 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 SYCP3Q8IZU3 236 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 ADAMTS2O95450 1211 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 YEATS4O95619 227 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 POLD1P28340 1107 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 NCOA7Q8NI08 942 aa14.11□□□□□ -0.15
FN1-202ENST00000336916 CTAGE1Q96RT6 745 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 PLCH2O75038 1416 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 ACTN2P35609 894 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 SPC24Q8NBT2 197 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 DDX19AQ9NUU7 478 aaKnown RBP14.1□□□□□ -0.15
FN1-202ENST00000336916 CALML3P27482 149 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 NBPF14Q5TI25 921 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 WDR78Q5VTH9 848 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
FN1-202ENST00000336916 LDHAL6AQ6ZMR3 332 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 TSPY2A6NKD2 308 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 UBA7P41226 1012 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 DYDC1Q8WWB3 177 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 TSNARE1Q96NA8 513 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
FN1-202ENST00000336916 TAX1BP1Q86VP1 789 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 ZNF710Q8N1W2 664 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 CENPHQ9H3R5 247 aa14.1□□□□□ -0.15
FN1-202ENST00000336916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.1□□□□□ -0.15
FN1-202ENST00000336916 FOXO3O43524 673 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 CNNM3Q8NE01 707 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 NLRP3Q96P20 1036 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 FLIIQ13045 1269 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 PRKCSHP14314 528 aaPredicted RBP14.09□□□□□ -0.15
FN1-202ENST00000336916 ESR2Q92731 530 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 STX6O43752 255 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 TNNI2P48788 182 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 MSANTD4Q8NCY6 345 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 TMEM67Q5HYA8 995 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 FILIP1Q7Z7B0 1213 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 GSTTP1A0A1W2PQM5 241 aa14.09□□□□□ -0.15
FN1-202ENST00000336916 CALM1P0DP23 149 aa14.08□□□□□ -0.15
FN1-202ENST00000336916 CALM2P0DP24 149 aa14.08□□□□□ -0.15
FN1-202ENST00000336916 CALM3P0DP25 149 aa14.08□□□□□ -0.15
FN1-202ENST00000336916 TOP1P11387 765 aaKnown RBP14.08□□□□□ -0.15
FN1-202ENST00000336916 CASQ1P31415 396 aa14.08□□□□□ -0.15
FN1-202ENST00000336916 LUZP1Q86V48 1076 aa14.08□□□□□ -0.15
FN1-202ENST00000336916 STX1AQ16623 288 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 STK11IPQ8N1F8 1099 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 BOLA2Q9H3K6 86 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 CDCA7LQ96GN5 454 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 WDR62O43379 1518 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 LRSAM1Q6UWE0 723 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 UBXN4Q92575 508 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 BCL11BQ9C0K0 894 aaPredicted RBP14.08□□□□□ -0.16
FN1-202ENST00000336916 SH2D4AQ9H788 454 aa14.08□□□□□ -0.16
FN1-202ENST00000336916 KDM4AO75164 1064 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 TBCAO75347 108 aaKnown RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 MAP2K1Q02750 393 aaPredicted RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 GLT8D2Q9H1C3 349 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 C14orf93Q9H972 538 aaKnown RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 MAP3K2Q9Y2U5 619 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 CHD1O14646 1710 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 POLR3GO15318 223 aaPredicted RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 CCDC82Q8N4S0 544 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 EXOC6BQ9Y2D4 811 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 MAP4K4O95819 1239 aaPredicted RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 XPCQ01831 940 aaPredicted RBP14.07□□□□□ -0.16
FN1-202ENST00000336916 EYA3Q99504 573 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 HAUS2Q9NVX0 235 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
FN1-202ENST00000336916 ANKRD2Q9GZV1 360 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms