RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 SPHKAPQ2M3C7 1700 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 IDH1O75874 414 aaKnown RBP8.6□□□□□ -1.03
EPHA3-201ENST00000336596 ALDH1B1P30837 517 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 GOLGA6L3A6NEY3 463 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 FLIIQ13045 1269 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 USP37Q86T82 979 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 NAPBQ9H115 298 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 ZBTB3Q9H5J0 574 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 ABCF2Q9UG63 623 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
EPHA3-201ENST00000336596 F6X3S4 739 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 TSG101Q99816 390 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 ERLIN2O94905 339 aa8.6□□□□□ -1.03
EPHA3-201ENST00000336596 NAP1L1P55209 391 aaKnown RBP8.6□□□□□ -1.03
EPHA3-201ENST00000336596 INO80Q9ULG1 1556 aaPredicted RBP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 MAP3K5Q99683 1374 aa8.59□□□□□ -1.03
EPHA3-201ENST00000336596 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 RABEP1Q15276 862 aa8.59□□□□□ -1.03
EPHA3-201ENST00000336596 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
EPHA3-201ENST00000336596 GLRX3O76003 335 aaKnown RBP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 GPR162Q16538 588 aa8.59□□□□□ -1.03
EPHA3-201ENST00000336596 NUP133Q8WUM0 1156 aa8.59□□□□□ -1.03
EPHA3-201ENST00000336596 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 BIN2Q9UBW5 565 aaPredicted RBP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 CCNL1Q9UK58 526 aaPredicted RBP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 CLTCQ00610 1675 aaKnown RBP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 FAM135BQ49AJ0 1406 aa8.59□□□□□ -1.03
EPHA3-201ENST00000336596 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
EPHA3-201ENST00000336596 STK38Q15208 465 aa8.59□□□□□ -1.03
EPHA3-201ENST00000336596 GNAQP50148 359 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 VTI1AQ96AJ9 217 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 KINO60870 393 aaKnown RBP8.58□□□□□ -1.04
EPHA3-201ENST00000336596 ZFYP08048 801 aaPredicted RBP8.58□□□□□ -1.04
EPHA3-201ENST00000336596 GPTP24298 496 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 CATIPQ7Z7H3 387 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 FOXD4L1Q9NU39 408 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 ABCA6Q8N139 1617 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 PHACTR3Q96KR7 559 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 FERMT1Q9BQL6 677 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 C22orf23Q9BZE7 217 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 RSPH6AQ9H0K4 717 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 BABAM1Q9NWV8 329 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 PICK1Q9NRD5 415 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 ADGRB3O60242 1522 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 ARHGEF40Q8TER5 1519 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 IL13P35225 146 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 ERMNQ8TAM6 284 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 MAP3K2Q9Y2U5 619 aa8.58□□□□□ -1.04
EPHA3-201ENST00000336596 SYNMO15061 1565 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 ANXA1P04083 346 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 GNAT2P19087 354 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 CAMSAP1Q5T5Y3 1602 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 CNBD1Q8NA66 436 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 CETN1Q12798 172 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 FAM196AQ6ZSG2 479 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 CEP57L1Q8IYX8 460 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 GTPBP4Q9BZE4 634 aaKnown RBP8.57□□□□□ -1.04
EPHA3-201ENST00000336596 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 APBA3O96018 575 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 NIM1KQ8IY84 436 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 ERCC4Q92889 916 aaPredicted RBP8.57□□□□□ -1.04
EPHA3-201ENST00000336596 ZNF219Q9P2Y4 722 aaPredicted RBP8.57□□□□□ -1.04
EPHA3-201ENST00000336596 AGLP35573 1532 aa8.57□□□□□ -1.04
EPHA3-201ENST00000336596 PI4KAP2A4QPH2 592 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 PI4KAP1Q8N8J0 262 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 RUFY1Q96T51 708 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 RNMTO43148 476 aaKnown RBP8.56□□□□□ -1.04
EPHA3-201ENST00000336596 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 STK24Q9Y6E0 443 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 LMTK2Q8IWU2 1503 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 RFX1P22670 979 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 TNFAIP1Q13829 316 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 NAP1L5Q96NT1 182 aaPredicted RBP8.56□□□□□ -1.04
EPHA3-201ENST00000336596 KAT14Q9H8E8 782 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 CHPF2Q9P2E5 772 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 KIDINS220Q9ULH0 1771 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 FAM98CQ17RN3 349 aaKnown RBP8.56□□□□□ -1.04
EPHA3-201ENST00000336596 GRIPAP1Q4V328 841 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 BLOC1S2Q6QNY1 142 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 TMC4Q7Z404 712 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
EPHA3-201ENST00000336596 IL1RAPL2Q9NP60 686 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 ATP5J2-PTCD1G3V325 749 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 TRIM27P14373 513 aa8.56□□□□□ -1.04
EPHA3-201ENST00000336596 SETQ01105 290 aaPredicted RBP8.56□□□□□ -1.04
EPHA3-201ENST00000336596 AMPD3Q01432 767 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 TMTC2Q8N394 836 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 SDF4Q9BRK5 362 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 CNNM2Q9H8M5 875 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 AS3MTQ9HBK9 375 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 NIP7Q9Y221 180 aaKnown RBP eCLIP8.55□□□□□ -1.04
EPHA3-201ENST00000336596 EXOC6BQ9Y2D4 811 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 E9PCH4 1651 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 ATP7BP35670 1465 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 CCDC148Q8NFR7 591 aa8.55□□□□□ -1.04
EPHA3-201ENST00000336596 MYCNP04198 464 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms