RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TFCP2Q12800 502 aa15.2■□□□□ 0.02
VSTM4-202ENST00000332853 PPFIBP1Q86W92 1011 aa15.2■□□□□ 0.02
VSTM4-202ENST00000332853 BRF1Q92994 677 aa15.2■□□□□ 0.02
VSTM4-202ENST00000332853 LINS1Q8NG48 757 aa15.19■□□□□ 0.02
VSTM4-202ENST00000332853 TMEM67Q5HYA8 995 aa15.19■□□□□ 0.02
VSTM4-202ENST00000332853 TANGO6Q9C0B7 1094 aa15.19■□□□□ 0.02
VSTM4-202ENST00000332853 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
VSTM4-202ENST00000332853 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
VSTM4-202ENST00000332853 ARGLU1Q9NWB6 273 aaPredicted RBP15.19■□□□□ 0.02
VSTM4-202ENST00000332853 TNNT3P45378 269 aaPredicted RBP15.18■□□□□ 0.02
VSTM4-202ENST00000332853 SIRT1Q96EB6 747 aa15.18■□□□□ 0.02
VSTM4-202ENST00000332853 USP25Q9UHP3 1055 aa15.18■□□□□ 0.02
VSTM4-202ENST00000332853 CNPY2Q9Y2B0 182 aa15.18■□□□□ 0.02
VSTM4-202ENST00000332853 NEO1Q92859 1461 aa15.18■□□□□ 0.02
VSTM4-202ENST00000332853 CFAP74Q9C0B2 1584 aa15.18■□□□□ 0.02
VSTM4-202ENST00000332853 HMGN5P82970 282 aaKnown RBP15.18■□□□□ 0.02
VSTM4-202ENST00000332853 CDC5LQ99459 802 aaKnown RBP15.18■□□□□ 0.02
VSTM4-202ENST00000332853 DHX8Q14562 1220 aaKnown RBP15.18■□□□□ 0.02
VSTM4-202ENST00000332853 PDIA4P13667 645 aaKnown RBP15.18■□□□□ 0.02
VSTM4-202ENST00000332853 USP19O94966 1318 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 CHL1O00533 1208 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 STIM1Q13586 685 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 CHST3Q7LGC8 479 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 IQCA1Q86XH1 822 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 KLHDC4Q8TBB5 520 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 AK7Q96M32 723 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 ZGPATQ8N5A5 531 aaKnown RBP15.17■□□□□ 0.02
VSTM4-202ENST00000332853 FSIP1Q8NA03 581 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 ATP2B3Q16720 1220 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 CT47A1Q5JQC4 288 aaPredicted RBP15.17■□□□□ 0.02
VSTM4-202ENST00000332853 KLHL10Q6JEL2 608 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 HELBQ8NG08 1087 aaPredicted RBP15.17■□□□□ 0.02
VSTM4-202ENST00000332853 HMG20BQ9P0W2 317 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 CEP131Q9UPN4 1083 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 ERVK-7P63135 1459 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 Q6ZUG5 572 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 ZNF444Q8N0Y2 327 aaPredicted RBP15.17■□□□□ 0.02
VSTM4-202ENST00000332853 DCAF5Q96JK2 942 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 C6orf229H3BNL8 230 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 ZSCAN23Q3MJ62 389 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 ISM2Q6H9L7 571 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 C8orf37Q96NL8 207 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
VSTM4-202ENST00000332853 CFAP100Q494V2 611 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 CTCFLQ8NI51 663 aaPredicted RBP15.16■□□□□ 0.02
VSTM4-202ENST00000332853 BIN1O00499 593 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 KIF1BO60333 1816 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
VSTM4-202ENST00000332853 UQCRHLA0A096LP55 91 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 UQCRHP07919 91 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 ORC3Q9UBD5 711 aaPredicted RBP15.16■□□□□ 0.02
VSTM4-202ENST00000332853 ZSCAN22P10073 491 aaPredicted RBP15.16■□□□□ 0.02
VSTM4-202ENST00000332853 RFC4P35249 363 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
VSTM4-202ENST00000332853 PAG1Q9NWQ8 432 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 CBFA2T2O43439 604 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 CHMLP26374 656 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 MFSD6Q6ZSS7 791 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 CRACR2BQ8N4Y2 399 aaPredicted RBP15.16■□□□□ 0.02
VSTM4-202ENST00000332853 PANK2Q9BZ23 570 aa15.16■□□□□ 0.02
VSTM4-202ENST00000332853 NBPF5PQ86XG9 351 aaPredicted RBP15.15■□□□□ 0.02
VSTM4-202ENST00000332853 DZIP3Q86Y13 1208 aaKnown RBP15.15■□□□□ 0.02
VSTM4-202ENST00000332853 SEC63Q9UGP8 760 aaKnown RBP15.15■□□□□ 0.02
VSTM4-202ENST00000332853 NIP7Q9Y221 180 aaKnown RBP eCLIP15.15■□□□□ 0.02
VSTM4-202ENST00000332853 SLC26A6Q9BXS9 759 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 SMTNL1A8MU46 457 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 CPA1P15085 419 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 DDB1Q16531 1140 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 SNX21Q969T3 373 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 USP26Q9BXU7 913 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 KLF18A0A0U1RQI7 1052 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 RNF41Q9H4P4 317 aaPredicted RBP15.15■□□□□ 0.02
VSTM4-202ENST00000332853 IL15P40933 162 aaPredicted RBP15.15■□□□□ 0.02
VSTM4-202ENST00000332853 GIMAP6Q6P9H5 292 aa15.15■□□□□ 0.02
VSTM4-202ENST00000332853 BTG4Q9NY30 223 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 RNF123Q5XPI4 1314 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 PNMA6EA0A0J9YXQ4 647 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 CCP110O43303 1012 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 ZNF76P36508 570 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
VSTM4-202ENST00000332853 AK2P54819 239 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 ZSCAN30Q86W11 494 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 METP08581 1390 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 NLRP5P59047 1200 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 USP48Q86UV5 1035 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 ZFYVE27Q5T4F4 411 aa15.14■□□□□ 0.01
VSTM4-202ENST00000332853 KDM5DQ9BY66 1539 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 TEX35Q5T0J7 233 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 SLC9C2Q5TAH2 1124 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 ANO10Q9NW15 660 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 ZNHIT6Q9NWK9 470 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms