RNA–Protein interactions for RNA: ENST00000330871.3

SOCS3-201, Transcript of suppressor of cytokine signaling 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-201ENST00000330871 CCZ1BP86790 482 aa21.49■■□□□ 1.03
SOCS3-201ENST00000330871 CCZ1P86791 482 aaPredicted RBP21.49■■□□□ 1.03
SOCS3-201ENST00000330871 GORABQ5T7V8 394 aa21.49■■□□□ 1.03
SOCS3-201ENST00000330871 SMARCE1Q969G3 411 aa21.49■■□□□ 1.03
SOCS3-201ENST00000330871 MIS18AQ9NYP9 233 aa21.49■■□□□ 1.03
SOCS3-201ENST00000330871 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
SOCS3-201ENST00000330871 HYPKQ9NX55 129 aa21.48■■□□□ 1.03
SOCS3-201ENST00000330871 SPG7Q9UQ90 795 aa21.48■■□□□ 1.03
SOCS3-201ENST00000330871 C3P01024 1663 aa21.48■■□□□ 1.03
SOCS3-201ENST00000330871 ST3GAL1Q11201 340 aa21.48■■□□□ 1.03
SOCS3-201ENST00000330871 GOLGA6L19H0YKK7 550 aa21.47■■□□□ 1.03
SOCS3-201ENST00000330871 TEX35Q5T0J7 233 aa21.47■■□□□ 1.03
SOCS3-201ENST00000330871 LARP1BQ659C4 914 aaKnown RBP21.47■■□□□ 1.03
SOCS3-201ENST00000330871 SIRT1Q96EB6 747 aa21.47■■□□□ 1.03
SOCS3-201ENST00000330871 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
SOCS3-201ENST00000330871 LRRFIP2Q9Y608 721 aaKnown RBP21.47■■□□□ 1.03
SOCS3-201ENST00000330871 A0A087WWV3 80 aa21.47■■□□□ 1.03
SOCS3-201ENST00000330871 METP08581 1390 aa21.46■■□□□ 1.03
SOCS3-201ENST00000330871 GNAI3P08754 354 aa21.46■■□□□ 1.03
SOCS3-201ENST00000330871 CLSTN2Q9H4D0 955 aa21.46■■□□□ 1.03
SOCS3-201ENST00000330871 SEC31AO94979 1220 aaKnown RBP21.46■■□□□ 1.03
SOCS3-201ENST00000330871 MLECQ14165 292 aa21.46■■□□□ 1.03
SOCS3-201ENST00000330871 HSP90AB2PQ58FF8 381 aa21.46■■□□□ 1.03
SOCS3-201ENST00000330871 RNF20Q5VTR2 975 aa21.46■■□□□ 1.03
SOCS3-201ENST00000330871 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
SOCS3-201ENST00000330871 CDC25BP30305 580 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 ATP8B2P98198 1209 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 ADCK5Q3MIX3 580 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 C11orf57Q6ZUT1 292 aaPredicted RBP21.45■■□□□ 1.02
SOCS3-201ENST00000330871 SPATA32Q96LK8 384 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 STAP2Q9UGK3 403 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 MYO1CO00159 1063 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 EPB41L2O43491 1005 aaKnown RBP21.45■■□□□ 1.02
SOCS3-201ENST00000330871 SNW1Q13573 536 aaKnown RBP21.45■■□□□ 1.02
SOCS3-201ENST00000330871 CCDC191Q8NCU4 936 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 BICD2Q8TD16 824 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 LSG1Q9H089 658 aaKnown RBP21.45■■□□□ 1.02
SOCS3-201ENST00000330871 EFCC1Q9HA90 598 aa21.45■■□□□ 1.02
SOCS3-201ENST00000330871 TTC21BQ7Z4L5 1316 aa21.44■■□□□ 1.02
SOCS3-201ENST00000330871 SGSM2O43147 1006 aa21.44■■□□□ 1.02
SOCS3-201ENST00000330871 TXLNBQ8N3L3 684 aa21.44■■□□□ 1.02
SOCS3-201ENST00000330871 STK31Q9BXU1 1019 aa21.44■■□□□ 1.02
SOCS3-201ENST00000330871 TUBGCP6Q96RT7 1819 aa21.44■■□□□ 1.02
SOCS3-201ENST00000330871 NOP2P46087 812 aaKnown RBP21.44■■□□□ 1.02
SOCS3-201ENST00000330871 ME3Q16798 604 aa21.44■■□□□ 1.02
SOCS3-201ENST00000330871 CWC27Q6UX04 472 aaKnown RBP21.44■■□□□ 1.02
SOCS3-201ENST00000330871 PDRG1Q9NUG6 133 aa21.44■■□□□ 1.02
SOCS3-201ENST00000330871 DDX19AQ9NUU7 478 aaKnown RBP21.44■■□□□ 1.02
SOCS3-201ENST00000330871 NEMFO60524 1076 aa21.43■■□□□ 1.02
SOCS3-201ENST00000330871 JAKMIP1Q96N16 626 aaKnown RBP21.43■■□□□ 1.02
SOCS3-201ENST00000330871 AKAP12Q02952 1782 aa21.43■■□□□ 1.02
SOCS3-201ENST00000330871 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
SOCS3-201ENST00000330871 DHX16O60231 1041 aaKnown RBP21.43■■□□□ 1.02
SOCS3-201ENST00000330871 TMCO3Q6UWJ1 677 aa21.43■■□□□ 1.02
SOCS3-201ENST00000330871 IQCB1Q15051 598 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 ZSCAN26Q16670 478 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 RBM43Q6ZSC3 357 aaKnown RBP21.42■■□□□ 1.02
SOCS3-201ENST00000330871 ZRANB2O95218 330 aaKnown RBP eCLIP21.42■■□□□ 1.02
SOCS3-201ENST00000330871 TPM4P67936 248 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 L2HGDHQ9H9P8 463 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 ARHGEF10O15013 1369 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 MUM1L1Q5H9M0 696 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 TEX2Q8IWB9 1127 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 MRFAP1L1Q96HT8 127 aa21.42■■□□□ 1.02
SOCS3-201ENST00000330871 ELP1O95163 1332 aa21.41■■□□□ 1.02
SOCS3-201ENST00000330871 TTC21AQ8NDW8 1320 aa21.41■■□□□ 1.02
SOCS3-201ENST00000330871 ITSN1Q15811 1721 aa21.41■■□□□ 1.02
SOCS3-201ENST00000330871 FOXO3O43524 673 aa21.41■■□□□ 1.02
SOCS3-201ENST00000330871 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
SOCS3-201ENST00000330871 LEO1Q8WVC0 666 aaPredicted RBP21.41■■□□□ 1.02
SOCS3-201ENST00000330871 SECISBP2LQ93073 1101 aaKnown RBP21.41■■□□□ 1.02
SOCS3-201ENST00000330871 FBXW7Q969H0 707 aa21.41■■□□□ 1.02
SOCS3-201ENST00000330871 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.41■■□□□ 1.02
SOCS3-201ENST00000330871 PGBD1Q96JS3 809 aa21.4■■□□□ 1.02
SOCS3-201ENST00000330871 EPC1Q9H2F5 836 aa21.4■■□□□ 1.02
SOCS3-201ENST00000330871 OAS2P29728 719 aaKnown RBP21.4■■□□□ 1.02
SOCS3-201ENST00000330871 FLIIQ13045 1269 aa21.4■■□□□ 1.02
SOCS3-201ENST00000330871 E4F1Q66K89 784 aaPredicted RBP21.4■■□□□ 1.02
SOCS3-201ENST00000330871 AOX1Q06278 1338 aa21.4■■□□□ 1.02
SOCS3-201ENST00000330871 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
SOCS3-201ENST00000330871 CCDC34Q96HJ3 373 aa21.39■■□□□ 1.02
SOCS3-201ENST00000330871 OVOS2A0A0J9YW53 1432 aa21.39■■□□□ 1.01
SOCS3-201ENST00000330871 TECPR2O15040 1411 aa21.39■■□□□ 1.01
SOCS3-201ENST00000330871 OVOS2Q6IE36 1432 aa21.39■■□□□ 1.01
SOCS3-201ENST00000330871 BECN2A8MW95 431 aa21.39■■□□□ 1.01
SOCS3-201ENST00000330871 GTF2A1P52655 376 aaPredicted RBP21.39■■□□□ 1.01
SOCS3-201ENST00000330871 CCDC93Q567U6 631 aa21.39■■□□□ 1.01
SOCS3-201ENST00000330871 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.01
SOCS3-201ENST00000330871 SARM1Q6SZW1 724 aa21.39■■□□□ 1.01
SOCS3-201ENST00000330871 PPP1R13BQ96KQ4 1090 aa21.39■■□□□ 1.01
SOCS3-201ENST00000330871 NRXN3Q9Y4C0 1643 aa21.38■■□□□ 1.01
SOCS3-201ENST00000330871 COL9A3Q14050 684 aaPredicted RBP21.38■■□□□ 1.01
SOCS3-201ENST00000330871 UBXN4Q92575 508 aa21.38■■□□□ 1.01
SOCS3-201ENST00000330871 MAP3K19Q56UN5 1328 aa21.38■■□□□ 1.01
SOCS3-201ENST00000330871 SPATA31D1Q6ZQQ2 1576 aa21.38■■□□□ 1.01
SOCS3-201ENST00000330871 SASH3O75995 380 aa21.38■■□□□ 1.01
SOCS3-201ENST00000330871 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
SOCS3-201ENST00000330871 SCAND2PQ9GZW5 306 aaPredicted RBP21.38■■□□□ 1.01
SOCS3-201ENST00000330871 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
SOCS3-201ENST00000330871 CASQ1P31415 396 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms