RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 GOLGA6L9A6NEM1 432 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 TNNT1P13805 278 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 TMEM67Q5HYA8 995 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 FSIP1Q8NA03 581 aa17.74■□□□□ 0.43
PTPN21-201ENST00000328736 TSPY2A6NKD2 308 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 DNA2P51530 1060 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 FAM107BQ9H098 131 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 SSFA2P28290 1259 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 LMAN1P49257 510 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 STX1AQ16623 288 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 ADAMTS2O95450 1211 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 SREK1Q8WXA9 508 aaKnown RBP17.73■□□□□ 0.43
PTPN21-201ENST00000328736 BICD1Q96G01 975 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
PTPN21-201ENST00000328736 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
PTPN21-201ENST00000328736 CGNQ9P2M7 1197 aaKnown RBP17.73■□□□□ 0.43
PTPN21-201ENST00000328736 TBCAO75347 108 aaKnown RBP17.73■□□□□ 0.43
PTPN21-201ENST00000328736 USP37Q86T82 979 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 ERMNQ8TAM6 284 aa17.73■□□□□ 0.43
PTPN21-201ENST00000328736 PUF60Q9UHX1 559 aaKnown RBP17.73■□□□□ 0.43
PTPN21-201ENST00000328736 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
PTPN21-201ENST00000328736 HLTFQ14527 1009 aaKnown RBP eCLIP17.72■□□□□ 0.43
PTPN21-201ENST00000328736 MFSD6Q6ZSS7 791 aa17.72■□□□□ 0.43
PTPN21-201ENST00000328736 CPLX3Q8WVH0 158 aa17.72■□□□□ 0.43
PTPN21-201ENST00000328736 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
PTPN21-201ENST00000328736 BBXQ8WY36 941 aaPredicted RBP17.72■□□□□ 0.43
PTPN21-201ENST00000328736 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
PTPN21-201ENST00000328736 TBC1D5Q92609 795 aa17.72■□□□□ 0.43
PTPN21-201ENST00000328736 RMND1Q9NWS8 449 aa17.72■□□□□ 0.43
PTPN21-201ENST00000328736 TRIM27P14373 513 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 SLC4A8Q2Y0W8 1093 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.43
PTPN21-201ENST00000328736 IDEP14735 1019 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 IGHDP01880 384 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 STX6O43752 255 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 UTP14AQ9BVJ6 771 aaKnown RBP17.71■□□□□ 0.43
PTPN21-201ENST00000328736 TMX1Q9H3N1 280 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 IKBKGQ9Y6K9 419 aa17.71■□□□□ 0.43
PTPN21-201ENST00000328736 UQCRFS1P1P0C7P4 283 aa17.71■□□□□ 0.42
PTPN21-201ENST00000328736 UBA7P41226 1012 aa17.71■□□□□ 0.42
PTPN21-201ENST00000328736 C6orf163Q5TEZ5 329 aa17.71■□□□□ 0.42
PTPN21-201ENST00000328736 EHBP1Q8NDI1 1231 aa17.71■□□□□ 0.42
PTPN21-201ENST00000328736 GOLIM4O00461 696 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 NOP2P46087 812 aaKnown RBP17.7■□□□□ 0.42
PTPN21-201ENST00000328736 PRPF4BQ13523 1007 aaKnown RBP17.7■□□□□ 0.42
PTPN21-201ENST00000328736 SPECC1LQ69YQ0 1117 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 PLVAPQ9BX97 442 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 NOS1P29475 1434 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 CCT2P78371 535 aaKnown RBP17.7■□□□□ 0.42
PTPN21-201ENST00000328736 VAT1LQ9HCJ6 419 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPN21-201ENST00000328736 RNF187Q5TA31 235 aaPredicted RBP17.7■□□□□ 0.42
PTPN21-201ENST00000328736 RAB11FIP4Q86YS3 637 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 GDPD2Q9HCC8 539 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 USP16Q9Y5T5 823 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 KIAA0586Q9BVV6 1533 aa17.7■□□□□ 0.42
PTPN21-201ENST00000328736 TTC12Q9H892 705 aaPredicted RBP17.69■□□□□ 0.42
PTPN21-201ENST00000328736 EXOC1Q9NV70 894 aa17.69■□□□□ 0.42
PTPN21-201ENST00000328736 HMG20BQ9P0W2 317 aa17.69■□□□□ 0.42
PTPN21-201ENST00000328736 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
PTPN21-201ENST00000328736 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
PTPN21-201ENST00000328736 RFC4P35249 363 aa17.69■□□□□ 0.42
PTPN21-201ENST00000328736 GPTP24298 496 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 HDAC9Q9UKV0 1011 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 ADGRL1O94910 1474 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 FOXO3O43524 673 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 ECHDC1Q9NTX5 307 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 CCDC144CPQ8IYA2 1237 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 IFNL2Q8IZJ0 200 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 ZGPATQ8N5A5 531 aaKnown RBP17.68■□□□□ 0.42
PTPN21-201ENST00000328736 ZNF622Q969S3 477 aaKnown RBP eCLIP17.68■□□□□ 0.42
PTPN21-201ENST00000328736 PSMD1Q99460 953 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 MAP3K2Q9Y2U5 619 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 CD109Q6YHK3 1445 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 SYNCQ9H7C4 482 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 TMC6Q7Z403 805 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 PPP1R14CQ8TAE6 165 aa17.68■□□□□ 0.42
PTPN21-201ENST00000328736 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
PTPN21-201ENST00000328736 TBC1D2Q9BYX2 928 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 GJB2P29033 226 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 CCDC152Q4G0S7 254 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 CTR9Q6PD62 1173 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 ZBTB3Q9H5J0 574 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 AMOTL2Q9Y2J4 779 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 BMP15O95972 392 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 ANXA1P04083 346 aa17.67■□□□□ 0.42
PTPN21-201ENST00000328736 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
PTPN21-201ENST00000328736 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
PTPN21-201ENST00000328736 MAATS1Q7Z4T9 603 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 SPATA24Q86W54 205 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 CEP112Q8N8E3 955 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 KRT23Q9C075 422 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 CA8P35219 290 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 CCDC102BQ68D86 513 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 SLC26A6Q9BXS9 759 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 MBIPQ9NS73 344 aa17.66■□□□□ 0.42
PTPN21-201ENST00000328736 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms