RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 GTF2F1P35269 517 aaKnown RBP eCLIP11.32□□□□□ -0.6
DDX53-201ENST00000327968 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
DDX53-201ENST00000327968 TTC6Q86TZ1 520 aa11.32□□□□□ -0.6
DDX53-201ENST00000327968 SIL1Q9H173 461 aa11.32□□□□□ -0.6
DDX53-201ENST00000327968 KRT85P78386 507 aa11.31□□□□□ -0.6
DDX53-201ENST00000327968 COL9A3Q14050 684 aaPredicted RBP11.31□□□□□ -0.6
DDX53-201ENST00000327968 PPP1R42Q7Z4L9 355 aa11.31□□□□□ -0.6
DDX53-201ENST00000327968 CACTINQ8WUQ7 758 aaKnown RBP11.31□□□□□ -0.6
DDX53-201ENST00000327968 RGPD1P0DJD0 1748 aa11.31□□□□□ -0.6
DDX53-201ENST00000327968 H3BQV1 296 aa11.31□□□□□ -0.6
DDX53-201ENST00000327968 IFFO2Q5TF58 517 aa11.31□□□□□ -0.6
DDX53-201ENST00000327968 HOMER1Q86YM7 354 aa11.31□□□□□ -0.6
DDX53-201ENST00000327968 FAM200AQ8TCP9 573 aa11.31□□□□□ -0.6
DDX53-201ENST00000327968 INTS4Q96HW7 963 aaKnown RBP11.31□□□□□ -0.6
DDX53-201ENST00000327968 PTH1RQ03431 593 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 FLIIQ13045 1269 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 KIF24Q5T7B8 1368 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
DDX53-201ENST00000327968 PTPN14Q15678 1187 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 STK11IPQ8N1F8 1099 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 PHAXQ9H814 394 aaKnown RBP11.3□□□□□ -0.6
DDX53-201ENST00000327968 OGFRQ9NZT2 677 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 RAB11FIP3O75154 756 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 CCDC144BQ3MJ40 725 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 CCDC144CPQ8IYA2 1237 aa11.3□□□□□ -0.6
DDX53-201ENST00000327968 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
DDX53-201ENST00000327968 ZNF853P0CG23 659 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
DDX53-201ENST00000327968 GNL2Q13823 731 aaKnown RBP11.29□□□□□ -0.6
DDX53-201ENST00000327968 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 BIN1O00499 593 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 SKILP12757 684 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 ZRSR1Q15695 479 aaKnown RBP11.29□□□□□ -0.6
DDX53-201ENST00000327968 MTMR6Q9Y217 621 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 NR1I2O75469 434 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
DDX53-201ENST00000327968 ME3Q16798 604 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 HSP90AA4PQ58FG1 418 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 CNTROBQ8N137 903 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 FTOQ9C0B1 505 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDX53-201ENST00000327968 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
DDX53-201ENST00000327968 ALS2Q96Q42 1657 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 CCT4P50991 539 aaKnown RBP11.28□□□□□ -0.6
DDX53-201ENST00000327968 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 CCDC8Q9H0W5 538 aaPredicted RBP11.28□□□□□ -0.6
DDX53-201ENST00000327968 ABCC6O95255 1503 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 RPAP1Q9BWH6 1393 aaPredicted RBP11.28□□□□□ -0.6
DDX53-201ENST00000327968 TTC21BQ7Z4L5 1316 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 SLIT3O75094 1523 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 SMC2O95347 1197 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 ZKSCAN1P17029 563 aaPredicted RBP11.28□□□□□ -0.6
DDX53-201ENST00000327968 ACEP12821 1306 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 GNAI3P08754 354 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 LARP1Q6PKG0 1096 aaKnown RBP11.28□□□□□ -0.6
DDX53-201ENST00000327968 CTNNA3Q9UI47 895 aa11.28□□□□□ -0.6
DDX53-201ENST00000327968 HSPA4P34932 840 aa11.27□□□□□ -0.6
DDX53-201ENST00000327968 AMPHP49418 695 aa11.27□□□□□ -0.6
DDX53-201ENST00000327968 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.6
DDX53-201ENST00000327968 ATP10DQ9P241 1426 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 IFIT2P09913 472 aaKnown RBP11.27□□□□□ -0.61
DDX53-201ENST00000327968 ERCC6LQ2NKX8 1250 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 KRT222Q8N1A0 295 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 BOLA2Q9H3K6 86 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 MED1Q15648 1581 aaPredicted RBP11.27□□□□□ -0.61
DDX53-201ENST00000327968 SMTNL1A8MU46 457 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 JAK2O60674 1132 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 AIMP1Q12904 312 aaKnown RBP11.27□□□□□ -0.61
DDX53-201ENST00000327968 KMT5BQ4FZB7 885 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
DDX53-201ENST00000327968 PEAK1Q9H792 1746 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 ZNF75DP51815 510 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 FAM227BQ96M60 508 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 TMEM51Q9NW97 253 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 NBPF7P0C2Y1 421 aaPredicted RBP11.26□□□□□ -0.61
DDX53-201ENST00000327968 MTHFSDQ2M296 383 aaKnown RBP11.26□□□□□ -0.61
DDX53-201ENST00000327968 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 EDC3Q96F86 508 aaKnown RBP11.26□□□□□ -0.61
DDX53-201ENST00000327968 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 ZSWIM4Q9H7M6 989 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 CRYBG1Q9Y4K1 1723 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 C1orf167Q5SNV9 1468 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 ANAPC15P60006 121 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
DDX53-201ENST00000327968 HDGFL1Q5TGJ6 251 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 FBXO38Q6PIJ6 1188 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
DDX53-201ENST00000327968 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
DDX53-201ENST00000327968 SGSM2O43147 1006 aa11.25□□□□□ -0.61
DDX53-201ENST00000327968 BRPF1P55201 1214 aaPredicted RBP11.25□□□□□ -0.61
DDX53-201ENST00000327968 NEK11Q8NG66 645 aa11.25□□□□□ -0.61
DDX53-201ENST00000327968 ANKRD7Q92527 254 aa11.25□□□□□ -0.61
DDX53-201ENST00000327968 CHL1O00533 1208 aa11.25□□□□□ -0.61
DDX53-201ENST00000327968 SYT10Q6XYQ8 523 aa11.25□□□□□ -0.61
DDX53-201ENST00000327968 SDF4Q9BRK5 362 aa11.25□□□□□ -0.61
DDX53-201ENST00000327968 NFAT5O94916 1531 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms