RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 BECN2A8MW95 431 aa16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 KCNQ3O43525 872 aa16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 ZSCAN31Q96LW9 406 aaPredicted RBP16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 VGLL3A8MV65 326 aa16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 FSD1Q9BTV5 496 aa16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 ZSWIM6Q9HCJ5 1215 aa16.9■□□□□ 0.3
CHRNA3-201ENST00000326828 ZBTB9Q96C00 473 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 ELF2Q15723 593 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 KLHDC4Q8TBB5 520 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 ECHDC1Q9NTX5 307 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 CHGBP05060 677 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 SKILP12757 684 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 NLRP6P59044 892 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 GUCY1B3Q02153 619 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 CWF19L2Q2TBE0 894 aaKnown RBP16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 GORABQ5T7V8 394 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 FMNL2Q96PY5 1086 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
CHRNA3-201ENST00000326828 CCDC171Q6TFL3 1326 aa16.88■□□□□ 0.29
CHRNA3-201ENST00000326828 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
CHRNA3-201ENST00000326828 C11orf57Q6ZUT1 292 aaPredicted RBP16.88■□□□□ 0.29
CHRNA3-201ENST00000326828 PGBD1Q96JS3 809 aa16.88■□□□□ 0.29
CHRNA3-201ENST00000326828 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
CHRNA3-201ENST00000326828 PTPN14Q15678 1187 aa16.88■□□□□ 0.29
CHRNA3-201ENST00000326828 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 DNAAF4Q8WXU2 420 aa16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 FEZ1Q99689 392 aa16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 TLR7Q9NYK1 1049 aaKnown RBP16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 SLC27A2O14975 620 aa16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 AOX1Q06278 1338 aa16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 SCAND2PQ9GZW5 306 aaPredicted RBP16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 PPP6R1Q9UPN7 881 aa16.87■□□□□ 0.29
CHRNA3-201ENST00000326828 CLTCQ00610 1675 aaKnown RBP16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 BRF1Q92994 677 aa16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 ESF1Q9H501 851 aaKnown RBP16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 POLA2Q14181 598 aa16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 NECTIN1Q15223 517 aa16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 KMT5BQ4FZB7 885 aa16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 CLSTN2Q9H4D0 955 aa16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 LGR6Q9HBX8 967 aa16.86■□□□□ 0.29
CHRNA3-201ENST00000326828 PDCP20941 246 aa16.85■□□□□ 0.29
CHRNA3-201ENST00000326828 PLA2G4DQ86XP0 818 aa16.85■□□□□ 0.29
CHRNA3-201ENST00000326828 DDX19AQ9NUU7 478 aaKnown RBP16.85■□□□□ 0.29
CHRNA3-201ENST00000326828 NPHP3Q7Z494 1330 aa16.85■□□□□ 0.29
CHRNA3-201ENST00000326828 KIF18AQ8NI77 898 aa16.85■□□□□ 0.29
CHRNA3-201ENST00000326828 DDX41Q9UJV9 622 aaKnown RBP16.85■□□□□ 0.29
CHRNA3-201ENST00000326828 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
CHRNA3-201ENST00000326828 ZNF589Q86UQ0 364 aaPredicted RBP16.84■□□□□ 0.29
CHRNA3-201ENST00000326828 PAXBP1Q9Y5B6 917 aa16.84■□□□□ 0.29
CHRNA3-201ENST00000326828 LRRC8AQ8IWT6 810 aa16.84■□□□□ 0.29
CHRNA3-201ENST00000326828 FBXO38Q6PIJ6 1188 aa16.83■□□□□ 0.29
CHRNA3-201ENST00000326828 CCDC129Q6ZRS4 1044 aa16.83■□□□□ 0.29
CHRNA3-201ENST00000326828 GTF3C6Q969F1 213 aa16.83■□□□□ 0.29
CHRNA3-201ENST00000326828 PSMA5P28066 241 aa16.83■□□□□ 0.28
CHRNA3-201ENST00000326828 HSP90AB4PQ58FF6 505 aa16.83■□□□□ 0.28
CHRNA3-201ENST00000326828 BEND3Q5T5X7 828 aa16.83■□□□□ 0.28
CHRNA3-201ENST00000326828 ISM2Q6H9L7 571 aa16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 EAF2Q96CJ1 260 aaPredicted RBP16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 MAP3K2Q9Y2U5 619 aa16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 CDK11BP21127 795 aaKnown RBP16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 CCT2P78371 535 aaKnown RBP16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 TOB2Q14106 344 aaPredicted RBP16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 CCAR1Q8IX12 1150 aaKnown RBP16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 KRT222Q8N1A0 295 aa16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 TDRD7Q8NHU6 1098 aaKnown RBP16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 EVI5LQ96CN4 794 aa16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 IL17RAQ96F46 866 aa16.82■□□□□ 0.28
CHRNA3-201ENST00000326828 BIN1O00499 593 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 SLFN14P0C7P3 912 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 AOPEPQ8N6M6 819 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 PTPN21Q16825 1174 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 MPRIPQ6WCQ1 1025 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 PROSER3Q2NL68 480 aa16.81■□□□□ 0.28
CHRNA3-201ENST00000326828 SMC2O95347 1197 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 RPS6KB1P23443 525 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 ME1P48163 572 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 ERCC6LQ2NKX8 1250 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 LRRN4CLQ8ND94 238 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 SEC62Q99442 399 aaKnown RBP16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 MAP4K1Q92918 833 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 TTC41PQ6P2S7 1318 aa16.8■□□□□ 0.28
CHRNA3-201ENST00000326828 Q6ZUG5 572 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 CHST3Q7LGC8 479 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 FAM177A1Q8N128 213 aaPredicted RBP16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 TM6SF1Q9BZW5 370 aa16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 CEP170BQ9Y4F5 1589 aaPredicted RBP16.79■□□□□ 0.28
CHRNA3-201ENST00000326828 TEFQ10587 303 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms