RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 SLF2Q8IX21 1173 aa16.17■□□□□ 0.18
PCM1-201ENST00000325083 TRIM47Q96LD4 638 aa16.17■□□□□ 0.18
PCM1-201ENST00000325083 AFMP43652 599 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 F6X3S4 739 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 IFI16Q16666 785 aaKnown RBP16.16■□□□□ 0.18
PCM1-201ENST00000325083 MAP7D1Q3KQU3 841 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
PCM1-201ENST00000325083 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
PCM1-201ENST00000325083 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 ADAMTS2O95450 1211 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 STX6O43752 255 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 HSPA4P34932 840 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
PCM1-201ENST00000325083 RNF41Q9H4P4 317 aaPredicted RBP16.16■□□□□ 0.18
PCM1-201ENST00000325083 GOLIM4O00461 696 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 GSDMDP57764 484 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 NFE2L2Q16236 605 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
PCM1-201ENST00000325083 TBCAO75347 108 aaKnown RBP16.15■□□□□ 0.18
PCM1-201ENST00000325083 GNG11P61952 73 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 PTGS1P23219 599 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 MICU3Q86XE3 530 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 CCDC50Q8IVM0 306 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
PCM1-201ENST00000325083 EEF2P13639 858 aaKnown RBP16.14■□□□□ 0.18
PCM1-201ENST00000325083 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.18
PCM1-201ENST00000325083 ARID5AQ03989 594 aa16.14■□□□□ 0.18
PCM1-201ENST00000325083 NSRP1Q9H0G5 558 aaKnown RBP16.14■□□□□ 0.18
PCM1-201ENST00000325083 PDIA4P13667 645 aaKnown RBP16.14■□□□□ 0.17
PCM1-201ENST00000325083 AKNAD1Q5T1N1 836 aa16.14■□□□□ 0.17
PCM1-201ENST00000325083 ZNF830Q96NB3 372 aaPredicted RBP16.14■□□□□ 0.17
PCM1-201ENST00000325083 TMPOP42166 694 aaKnown RBP16.14■□□□□ 0.17
PCM1-201ENST00000325083 GTF2A1P52655 376 aaPredicted RBP16.14■□□□□ 0.17
PCM1-201ENST00000325083 ZNF622Q969S3 477 aaKnown RBP eCLIP16.14■□□□□ 0.177e-8■■□□□ 13
PCM1-201ENST00000325083 ANAPC4Q9UJX5 808 aa16.14■□□□□ 0.17
PCM1-201ENST00000325083 TAF7Q15545 349 aaPredicted RBP16.14■□□□□ 0.17
PCM1-201ENST00000325083 PLEKHH1Q9ULM0 1364 aa16.14■□□□□ 0.17
PCM1-201ENST00000325083 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.17
PCM1-201ENST00000325083 RRAGBQ5VZM2 374 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 TMCO4Q5TGY1 634 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 RASAL2Q9UJF2 1139 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 KIF5BP33176 963 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 CABP5Q9NP86 173 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 KIF21BO75037 1637 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 UBA7P41226 1012 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 ZBTB16Q05516 673 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 THEMISQ8N1K5 641 aaPredicted RBP16.13■□□□□ 0.17
PCM1-201ENST00000325083 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 STAT6P42226 847 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
PCM1-201ENST00000325083 RSPH14Q9UHP6 348 aa16.13■□□□□ 0.17
PCM1-201ENST00000325083 STAC3Q96MF2 364 aa16.12■□□□□ 0.17
PCM1-201ENST00000325083 TTC12Q9H892 705 aaPredicted RBP16.12■□□□□ 0.17
PCM1-201ENST00000325083 MFSD6Q6ZSS7 791 aa16.12■□□□□ 0.17
PCM1-201ENST00000325083 NSD3Q9BZ95 1437 aa16.12■□□□□ 0.17
PCM1-201ENST00000325083 IARSP41252 1262 aaKnown RBP16.12■□□□□ 0.17
PCM1-201ENST00000325083 TTF1Q15361 905 aaPredicted RBP16.12■□□□□ 0.17
PCM1-201ENST00000325083 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
PCM1-201ENST00000325083 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
PCM1-201ENST00000325083 MPHOSPH6Q99547 160 aaKnown RBP16.12■□□□□ 0.17
PCM1-201ENST00000325083 N4BP3O15049 544 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 NOL3O60936 208 aaKnown RBP16.11■□□□□ 0.17
PCM1-201ENST00000325083 UBASH3AP57075 661 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 PDE4BQ07343 736 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 PLS1Q14651 629 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 HEATR3Q7Z4Q2 680 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 CAPZA3Q96KX2 299 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 TSHZ3Q63HK5 1081 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 LRSAM1Q6UWE0 723 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
PCM1-201ENST00000325083 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
PCM1-201ENST00000325083 CALM1P0DP23 149 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 CALM2P0DP24 149 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 CALM3P0DP25 149 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
PCM1-201ENST00000325083 DDX19AQ9NUU7 478 aaKnown RBP16.1■□□□□ 0.17
PCM1-201ENST00000325083 RPGRIP1LQ68CZ1 1315 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 HLA-DOAP06340 250 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 ATRIPQ8WXE1 791 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
PCM1-201ENST00000325083 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 NEMFO60524 1076 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 ZMYND15Q9H091 742 aa16.1■□□□□ 0.17
PCM1-201ENST00000325083 CCDC172P0C7W6 258 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 TSPY3P0CV98 308 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 TSPY8P0CW00 308 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 DDX12PQ92771 950 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 ZBTB3Q9H5J0 574 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 MCM6Q14566 821 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
PCM1-201ENST00000325083 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms