RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ILDR2Q71H61 639 aa19.16■□□□□ 0.66
PRPF3-201ENST00000324862 COL23A1Q86Y22 540 aaPredicted RBP19.16■□□□□ 0.66
PRPF3-201ENST00000324862 NUP98P52948 1817 aa19.16■□□□□ 0.66
PRPF3-201ENST00000324862 UTYO14607 1347 aa19.15■□□□□ 0.66
PRPF3-201ENST00000324862 CHMP4BQ9H444 224 aaKnown RBP19.15■□□□□ 0.66
PRPF3-201ENST00000324862 AFDNP55196 1824 aaKnown RBP19.15■□□□□ 0.66
PRPF3-201ENST00000324862 MSH5O43196 834 aa19.15■□□□□ 0.66
PRPF3-201ENST00000324862 SSFA2P28290 1259 aa19.15■□□□□ 0.66
PRPF3-201ENST00000324862 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
PRPF3-201ENST00000324862 PDGFDQ9GZP0 370 aaPredicted RBP19.15■□□□□ 0.66
PRPF3-201ENST00000324862 BICC1Q9H694 974 aaKnown RBP19.15■□□□□ 0.66
PRPF3-201ENST00000324862 KDM2BQ8NHM5 1336 aa19.14■□□□□ 0.66
PRPF3-201ENST00000324862 H7C1W4 665 aa19.14■□□□□ 0.66
PRPF3-201ENST00000324862 TRIM28Q13263 835 aaKnown RBP19.14■□□□□ 0.66
PRPF3-201ENST00000324862 AAMPQ13685 434 aa19.14■□□□□ 0.66
PRPF3-201ENST00000324862 UPF1Q92900 1129 aaKnown RBP eCLIP19.14■□□□□ 0.66
PRPF3-201ENST00000324862 C4AP0C0L4 1744 aa19.14■□□□□ 0.66
PRPF3-201ENST00000324862 GOLGB1Q14789 3259 aaKnown RBP19.14■□□□□ 0.65
PRPF3-201ENST00000324862 NUTM1Q86Y26 1132 aa19.14■□□□□ 0.65
PRPF3-201ENST00000324862 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 GYS1P13807 737 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 CCDC24Q8N4L8 307 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 ANKRD44Q8N8A2 993 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 TRMT112Q9UI30 125 aaKnown RBP19.13■□□□□ 0.65
PRPF3-201ENST00000324862 SLC15A2Q16348 729 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 CLEC4GQ6UXB4 293 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 SRCAPQ6ZRS2 3230 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 ZNF652Q9Y2D9 606 aa19.13■□□□□ 0.65
PRPF3-201ENST00000324862 ADRA2BP18089 450 aa19.12■□□□□ 0.65
PRPF3-201ENST00000324862 PPP1R42Q7Z4L9 355 aa19.12■□□□□ 0.65
PRPF3-201ENST00000324862 CCDC85AQ96PX6 553 aaPredicted RBP19.12■□□□□ 0.65
PRPF3-201ENST00000324862 RGPD3A6NKT7 1758 aaPredicted RBP19.12■□□□□ 0.65
PRPF3-201ENST00000324862 RGPD4Q7Z3J3 1758 aa19.12■□□□□ 0.65
PRPF3-201ENST00000324862 BCORQ6W2J9 1755 aa19.12■□□□□ 0.65
PRPF3-201ENST00000324862 ZBTB38Q8NAP3 1195 aaPredicted RBP19.11■□□□□ 0.65
PRPF3-201ENST00000324862 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
PRPF3-201ENST00000324862 SCN7AQ01118 1682 aa19.11■□□□□ 0.65
PRPF3-201ENST00000324862 HDAC1Q13547 482 aaPredicted RBP19.11■□□□□ 0.65
PRPF3-201ENST00000324862 RWDD1Q9H446 243 aaPredicted RBP19.11■□□□□ 0.65
PRPF3-201ENST00000324862 SRGAP3O43295 1099 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 NFIXQ14938 502 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 RPAP2Q8IXW5 612 aaPredicted RBP19.1■□□□□ 0.65
PRPF3-201ENST00000324862 TUBGCP6Q96RT7 1819 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 NTSR2O95665 410 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 PCCAP05165 728 aaPredicted RBP19.1■□□□□ 0.65
PRPF3-201ENST00000324862 HCLS1P14317 486 aaPredicted RBP19.1■□□□□ 0.65
PRPF3-201ENST00000324862 ATP8B2P98198 1209 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 MSL1Q68DK7 614 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 CCDC125Q86Z20 511 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 KLHDC4Q8TBB5 520 aa19.1■□□□□ 0.65
PRPF3-201ENST00000324862 FOXO4P98177 505 aa19.09■□□□□ 0.65
PRPF3-201ENST00000324862 STK32BQ9NY57 414 aa19.09■□□□□ 0.65
PRPF3-201ENST00000324862 ANKRD36CQ5JPF3 1778 aa19.09■□□□□ 0.65
PRPF3-201ENST00000324862 APBB1O00213 710 aa19.09■□□□□ 0.65
PRPF3-201ENST00000324862 SETDB2Q96T68 719 aa19.09■□□□□ 0.65
PRPF3-201ENST00000324862 UTP14AQ9BVJ6 771 aaKnown RBP19.09■□□□□ 0.65
PRPF3-201ENST00000324862 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.64
PRPF3-201ENST00000324862 IRS4O14654 1257 aaPredicted RBP19.08■□□□□ 0.64
PRPF3-201ENST00000324862 CENPQQ7L2Z9 268 aaPredicted RBP19.08■□□□□ 0.64
PRPF3-201ENST00000324862 PA2G4Q9UQ80 394 aaKnown RBP19.08■□□□□ 0.64
PRPF3-201ENST00000324862 EXOC6BQ9Y2D4 811 aa19.08■□□□□ 0.64
PRPF3-201ENST00000324862 CHMP3Q9Y3E7 222 aa19.08■□□□□ 0.64
PRPF3-201ENST00000324862 ERFEQ4G0M1 354 aa19.07■□□□□ 0.64
PRPF3-201ENST00000324862 PARP10Q53GL7 1025 aa19.07■□□□□ 0.64
PRPF3-201ENST00000324862 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
PRPF3-201ENST00000324862 SH3TC1Q8TE82 1336 aa19.06■□□□□ 0.64
PRPF3-201ENST00000324862 DDR1Q08345 913 aa19.05■□□□□ 0.64
PRPF3-201ENST00000324862 C3orf67Q6ZVT6 689 aa19.05■□□□□ 0.64
PRPF3-201ENST00000324862 SSH3Q8TE77 659 aa19.05■□□□□ 0.64
PRPF3-201ENST00000324862 NBPF5PQ86XG9 351 aaPredicted RBP19.05■□□□□ 0.64
PRPF3-201ENST00000324862 POLA2Q14181 598 aa19.04■□□□□ 0.64
PRPF3-201ENST00000324862 RABL6Q3YEC7 729 aaPredicted RBP19.04■□□□□ 0.64
PRPF3-201ENST00000324862 ABCC12Q96J65 1359 aa19.04■□□□□ 0.64
PRPF3-201ENST00000324862 MTX1Q13505 466 aa19.04■□□□□ 0.64
PRPF3-201ENST00000324862 CDHR2Q9BYE9 1310 aa19.03■□□□□ 0.64
PRPF3-201ENST00000324862 TM4SF1P30408 202 aa19.03■□□□□ 0.64
PRPF3-201ENST00000324862 FAM161AQ3B820 660 aa19.03■□□□□ 0.64
PRPF3-201ENST00000324862 SMC5Q8IY18 1101 aa19.03■□□□□ 0.64
PRPF3-201ENST00000324862 DCTPP1Q9H773 170 aa19.03■□□□□ 0.64
PRPF3-201ENST00000324862 GTF2E1P29083 439 aaPredicted RBP19.03■□□□□ 0.64
PRPF3-201ENST00000324862 ZNF594Q96JF6 807 aaPredicted RBP19.03■□□□□ 0.64
PRPF3-201ENST00000324862 SIL1Q9H173 461 aa19.03■□□□□ 0.64
PRPF3-201ENST00000324862 HMMRO75330 724 aa19.02■□□□□ 0.64
PRPF3-201ENST00000324862 TTLL11Q8NHH1 800 aa19.02■□□□□ 0.64
PRPF3-201ENST00000324862 PDZRN3Q9UPQ7 1066 aa19.02■□□□□ 0.64
PRPF3-201ENST00000324862 RGL2O15211 777 aa19.02■□□□□ 0.63
PRPF3-201ENST00000324862 SMARCA5O60264 1052 aaPredicted RBP19.02■□□□□ 0.63
PRPF3-201ENST00000324862 SURF6O75683 361 aaKnown RBP19.02■□□□□ 0.63
PRPF3-201ENST00000324862 HMGB2P26583 209 aaKnown RBP19.02■□□□□ 0.63
PRPF3-201ENST00000324862 FLAD1Q8NFF5 587 aa19.02■□□□□ 0.63
PRPF3-201ENST00000324862 GREM2Q9H772 168 aa19.02■□□□□ 0.63
PRPF3-201ENST00000324862 RFX5P48382 616 aaPredicted RBP19.01■□□□□ 0.63
PRPF3-201ENST00000324862 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
PRPF3-201ENST00000324862 POLRMTO00411 1230 aaKnown RBP19.01■□□□□ 0.63
PRPF3-201ENST00000324862 NPHP1O15259 732 aa19.01■□□□□ 0.63
PRPF3-201ENST00000324862 SERPINB2P05120 415 aa19.01■□□□□ 0.63
PRPF3-201ENST00000324862 CTSWP56202 376 aa19.01■□□□□ 0.63
PRPF3-201ENST00000324862 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
PRPF3-201ENST00000324862 PLA2G12BQ9BX93 195 aa19.01■□□□□ 0.63
PRPF3-201ENST00000324862 HDAC5Q9UQL6 1122 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms