RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 SCNN1DP51172 638 aa26.17■■□□□ 1.78
SSNA1-201ENST00000322310 GRM1Q13255 1194 aa26.17■■□□□ 1.78
SSNA1-201ENST00000322310 PAXIP1Q6ZW49 1069 aaPredicted RBP26.17■■□□□ 1.78
SSNA1-201ENST00000322310 NGEFQ8N5V2 710 aa26.17■■□□□ 1.78
SSNA1-201ENST00000322310 CFAP53Q96M91 514 aa26.17■■□□□ 1.78
SSNA1-201ENST00000322310 CAPNS2Q96L46 248 aa26.16■■□□□ 1.78
SSNA1-201ENST00000322310 MIS18AQ9NYP9 233 aa26.16■■□□□ 1.78
SSNA1-201ENST00000322310 THSD7BQ9C0I4 1608 aa26.16■■□□□ 1.78
SSNA1-201ENST00000322310 U2AF1L5P0DN76 240 aaPredicted RBP26.15■■□□□ 1.78
SSNA1-201ENST00000322310 U2AF1Q01081 240 aaKnown RBP eCLIP26.15■■□□□ 1.78
SSNA1-201ENST00000322310 CYP4F22Q6NT55 531 aa26.15■■□□□ 1.78
SSNA1-201ENST00000322310 TRAF5O00463 557 aa26.14■■□□□ 1.78
SSNA1-201ENST00000322310 SLC34A2O95436 690 aa26.14■■□□□ 1.78
SSNA1-201ENST00000322310 CC2D2BQ6DHV5 1058 aa26.14■■□□□ 1.78
SSNA1-201ENST00000322310 LARGE2Q8N3Y3 721 aa26.14■■□□□ 1.78
SSNA1-201ENST00000322310 RPGRQ92834 1020 aaKnown RBP26.14■■□□□ 1.78
SSNA1-201ENST00000322310 NYXQ9GZU5 481 aa26.14■■□□□ 1.78
SSNA1-201ENST00000322310 CST9Q5W186 159 aa26.13■■□□□ 1.77
SSNA1-201ENST00000322310 NUDCQ9Y266 331 aa26.13■■□□□ 1.77
SSNA1-201ENST00000322310 LAMB4A4D0S4 1761 aa26.12■■□□□ 1.77
SSNA1-201ENST00000322310 TCERG1O14776 1098 aaKnown RBP26.12■■□□□ 1.77
SSNA1-201ENST00000322310 GPR101Q96P66 508 aaPredicted RBP26.12■■□□□ 1.77
SSNA1-201ENST00000322310 GPTP24298 496 aa26.11■■□□□ 1.77
SSNA1-201ENST00000322310 HOXA10P31260 410 aaPredicted RBP26.11■■□□□ 1.77
SSNA1-201ENST00000322310 ECE1P42892 770 aa26.11■■□□□ 1.77
SSNA1-201ENST00000322310 TAF7Q15545 349 aaPredicted RBP26.11■■□□□ 1.77
SSNA1-201ENST00000322310 TTLL7Q6ZT98 887 aa26.11■■□□□ 1.77
SSNA1-201ENST00000322310 UBN2Q6ZU65 1347 aa26.11■■□□□ 1.77
SSNA1-201ENST00000322310 CCDC85CA6NKD9 419 aa26.1■■□□□ 1.77
SSNA1-201ENST00000322310 BEGAINQ9BUH8 593 aa26.1■■□□□ 1.77
SSNA1-201ENST00000322310 TSKSQ9UJT2 592 aa26.1■■□□□ 1.77
SSNA1-201ENST00000322310 MAP3K15Q6ZN16 1313 aa26.1■■□□□ 1.77
SSNA1-201ENST00000322310 RIC1Q4ADV7 1423 aa26.09■■□□□ 1.77
SSNA1-201ENST00000322310 ERVV-1B6SEH8 477 aa26.09■■□□□ 1.77
SSNA1-201ENST00000322310 HTATSF1O43719 755 aaKnown RBP26.09■■□□□ 1.77
SSNA1-201ENST00000322310 USP50Q70EL3 339 aaPredicted RBP26.09■■□□□ 1.77
SSNA1-201ENST00000322310 PPEF1O14829 653 aaPredicted RBP26.08■■□□□ 1.77
SSNA1-201ENST00000322310 AOC2O75106 756 aa26.08■■□□□ 1.77
SSNA1-201ENST00000322310 C3orf67Q6ZVT6 689 aa26.08■■□□□ 1.77
SSNA1-201ENST00000322310 NIM1KQ8IY84 436 aa26.08■■□□□ 1.77
SSNA1-201ENST00000322310 ZBTB3Q9H5J0 574 aa26.08■■□□□ 1.77
SSNA1-201ENST00000322310 RRP7AQ9Y3A4 280 aaKnown RBP26.08■■□□□ 1.77
SSNA1-201ENST00000322310 TLL2Q9Y6L7 1015 aa26.08■■□□□ 1.77
SSNA1-201ENST00000322310 NUP98P52948 1817 aa26.08■■□□□ 1.77
SSNA1-201ENST00000322310 SUSD4Q5VX71 490 aa26.07■■□□□ 1.76
SSNA1-201ENST00000322310 KIF6Q6ZMV9 814 aa26.07■■□□□ 1.76
SSNA1-201ENST00000322310 MYL6BP14649 208 aa26.06■■□□□ 1.76
SSNA1-201ENST00000322310 RBM17Q96I25 401 aaKnown RBP26.06■■□□□ 1.76
SSNA1-201ENST00000322310 CRAMP1Q96RY5 1269 aa26.06■■□□□ 1.76
SSNA1-201ENST00000322310 IBTKQ9P2D0 1353 aaPredicted RBP26.06■■□□□ 1.76
SSNA1-201ENST00000322310 TRPM7Q96QT4 1865 aa26.05■■□□□ 1.76
SSNA1-201ENST00000322310 PPIP5K2O43314 1243 aa26.05■■□□□ 1.76
SSNA1-201ENST00000322310 AOC3Q16853 763 aa26.05■■□□□ 1.76
SSNA1-201ENST00000322310 GRIPAP1Q4V328 841 aa26.05■■□□□ 1.76
SSNA1-201ENST00000322310 PPP2R1AP30153 589 aa26.04■■□□□ 1.76
SSNA1-201ENST00000322310 MLLT1Q03111 559 aaPredicted RBP26.04■■□□□ 1.76
SSNA1-201ENST00000322310 GPRC5DQ9NZD1 345 aa26.04■■□□□ 1.76
SSNA1-201ENST00000322310 NTSR2O95665 410 aa26.03■■□□□ 1.76
SSNA1-201ENST00000322310 ADARB2Q9NS39 739 aaKnown RBP26.03■■□□□ 1.76
SSNA1-201ENST00000322310 KDM3BQ7LBC6 1761 aa26.02■■□□□ 1.76
SSNA1-201ENST00000322310 ZNF34Q8IZ26 560 aa26.02■■□□□ 1.76
SSNA1-201ENST00000322310 CELF2O95319 508 aaKnown RBP26.01■■□□□ 1.75
SSNA1-201ENST00000322310 MAP2K2P36507 400 aa26.01■■□□□ 1.75
SSNA1-201ENST00000322310 EIF4A1P60842 406 aaKnown RBP26.01■■□□□ 1.75
SSNA1-201ENST00000322310 SAPCD2Q86UD0 394 aa26.01■■□□□ 1.75
SSNA1-201ENST00000322310 CXCL9Q07325 125 aa26■■□□□ 1.75
SSNA1-201ENST00000322310 GLIS2Q9BZE0 524 aaPredicted RBP26■■□□□ 1.75
SSNA1-201ENST00000322310 RGS19P49795 217 aa25.99■■□□□ 1.75
SSNA1-201ENST00000322310 ATP6V0A2Q9Y487 856 aa25.99■■□□□ 1.75
SSNA1-201ENST00000322310 GMPSP49915 693 aaPredicted RBP25.98■■□□□ 1.75
SSNA1-201ENST00000322310 GIGYF2Q6Y7W6 1299 aaKnown RBP25.98■■□□□ 1.75
SSNA1-201ENST00000322310 PNISRQ8TF01 805 aaKnown RBP25.98■■□□□ 1.75
SSNA1-201ENST00000322310 THUMPD2Q9BTF0 503 aaKnown RBP25.98■■□□□ 1.75
SSNA1-201ENST00000322310 ZNRF3Q9ULT6 936 aa25.98■■□□□ 1.75
SSNA1-201ENST00000322310 NLRP3Q96P20 1036 aa25.97■■□□□ 1.75
SSNA1-201ENST00000322310 PPP1R42Q7Z4L9 355 aa25.96■■□□□ 1.75
SSNA1-201ENST00000322310 CFAP44Q96MT7 982 aa25.96■■□□□ 1.75
SSNA1-201ENST00000322310 MCOLN1Q9GZU1 580 aa25.96■■□□□ 1.75
SSNA1-201ENST00000322310 TMX4Q9H1E5 349 aaPredicted RBP25.96■■□□□ 1.75
SSNA1-201ENST00000322310 ZNF408Q9H9D4 720 aa25.96■■□□□ 1.75
SSNA1-201ENST00000322310 ABCC4O15439 1325 aa25.95■■□□□ 1.75
SSNA1-201ENST00000322310 DLG5Q8TDM6 1919 aa25.95■■□□□ 1.74
SSNA1-201ENST00000322310 VPS33BQ9H267 617 aa25.95■■□□□ 1.74
SSNA1-201ENST00000322310 RTFDC1Q9BY42 306 aaPredicted RBP25.94■■□□□ 1.74
SSNA1-201ENST00000322310 CA12O43570 354 aa25.93■■□□□ 1.74
SSNA1-201ENST00000322310 RAD17O75943 681 aa25.93■■□□□ 1.74
SSNA1-201ENST00000322310 HIRAP54198 1017 aaPredicted RBP25.93■■□□□ 1.74
SSNA1-201ENST00000322310 BRPF1P55201 1214 aaPredicted RBP25.93■■□□□ 1.74
SSNA1-201ENST00000322310 PARP10Q53GL7 1025 aa25.93■■□□□ 1.74
SSNA1-201ENST00000322310 TRPM4Q8TD43 1214 aa25.93■■□□□ 1.74
SSNA1-201ENST00000322310 PGAP2Q9UHJ9 254 aa25.93■■□□□ 1.74
SSNA1-201ENST00000322310 CIAPIN1Q6FI81 312 aa25.92■■□□□ 1.74
SSNA1-201ENST00000322310 DPP8Q6V1X1 898 aaPredicted RBP25.92■■□□□ 1.74
SSNA1-201ENST00000322310 SUPT20HQ8NEM7 779 aa25.92■■□□□ 1.74
SSNA1-201ENST00000322310 HHIPL1Q96JK4 782 aa25.92■■□□□ 1.74
SSNA1-201ENST00000322310 UTP14AQ9BVJ6 771 aaKnown RBP25.92■■□□□ 1.74
SSNA1-201ENST00000322310 BCL2L13Q9BXK5 485 aa25.92■■□□□ 1.74
SSNA1-201ENST00000322310 SHTN1A0MZ66 631 aa25.91■■□□□ 1.74
SSNA1-201ENST00000322310 SLC10A5Q5PT55 438 aa25.91■■□□□ 1.74
SSNA1-201ENST00000322310 NEFMP07197 916 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms