RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 GOLIM4O00461 696 aa13.73□□□□□ -0.21
ZNF543-201ENST00000321545 IDH1O75874 414 aaKnown RBP13.73□□□□□ -0.21
ZNF543-201ENST00000321545 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
ZNF543-201ENST00000321545 G3V3G9 751 aa13.73□□□□□ -0.21
ZNF543-201ENST00000321545 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
ZNF543-201ENST00000321545 DCAF8Q5TAQ9 597 aa13.73□□□□□ -0.21
ZNF543-201ENST00000321545 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
ZNF543-201ENST00000321545 ABCF2Q9UG63 623 aa13.73□□□□□ -0.21
ZNF543-201ENST00000321545 SRP68Q9UHB9 627 aaKnown RBP13.73□□□□□ -0.21
ZNF543-201ENST00000321545 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
ZNF543-201ENST00000321545 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
ZNF543-201ENST00000321545 PUS3Q9BZE2 481 aaKnown RBP13.72□□□□□ -0.21
ZNF543-201ENST00000321545 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
ZNF543-201ENST00000321545 SNAP23O00161 211 aa13.72□□□□□ -0.21
ZNF543-201ENST00000321545 SMARCC1Q92922 1105 aaPredicted RBP13.72□□□□□ -0.21
ZNF543-201ENST00000321545 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
ZNF543-201ENST00000321545 ADCY9O60503 1353 aa13.72□□□□□ -0.21
ZNF543-201ENST00000321545 NCOA3Q9Y6Q9 1424 aa13.72□□□□□ -0.21
ZNF543-201ENST00000321545 GSPT1P15170 499 aaKnown RBP13.72□□□□□ -0.21
ZNF543-201ENST00000321545 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
ZNF543-201ENST00000321545 TRPC5Q9UL62 973 aaPredicted RBP13.72□□□□□ -0.21
ZNF543-201ENST00000321545 ZNF652Q9Y2D9 606 aa13.72□□□□□ -0.21
ZNF543-201ENST00000321545 CPDO75976 1380 aa13.72□□□□□ -0.21
ZNF543-201ENST00000321545 TAF5LO75529 589 aa13.71□□□□□ -0.21
ZNF543-201ENST00000321545 FOSBP53539 338 aa13.71□□□□□ -0.21
ZNF543-201ENST00000321545 DBNDD2Q9BQY9 259 aa13.71□□□□□ -0.21
ZNF543-201ENST00000321545 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
ZNF543-201ENST00000321545 COL5A2P05997 1499 aaPredicted RBP13.71□□□□□ -0.21
ZNF543-201ENST00000321545 AKAP12Q02952 1782 aa13.71□□□□□ -0.21
ZNF543-201ENST00000321545 ANKRD18BA2A2Z9 1011 aa13.71□□□□□ -0.21
ZNF543-201ENST00000321545 RAB11FIP3O75154 756 aa13.71□□□□□ -0.21
ZNF543-201ENST00000321545 HSP90B1P14625 803 aaKnown RBP13.71□□□□□ -0.21
ZNF543-201ENST00000321545 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.21
ZNF543-201ENST00000321545 LRRC24Q50LG9 513 aa13.71□□□□□ -0.21
ZNF543-201ENST00000321545 TCIRG1Q13488 830 aa13.71□□□□□ -0.22
ZNF543-201ENST00000321545 PDIA6Q15084 440 aa13.71□□□□□ -0.22
ZNF543-201ENST00000321545 CCDC158Q5M9N0 1113 aa13.71□□□□□ -0.22
ZNF543-201ENST00000321545 JCADQ9P266 1359 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 GLRX3O76003 335 aaKnown RBP13.7□□□□□ -0.22
ZNF543-201ENST00000321545 MSL1Q68DK7 614 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
ZNF543-201ENST00000321545 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
ZNF543-201ENST00000321545 TCEANC2Q96MN5 208 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 SETDB2Q96T68 719 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 APBA3O96018 575 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 IGHMBP2P38935 993 aaKnown RBP13.7□□□□□ -0.22
ZNF543-201ENST00000321545 RUFY2Q8WXA3 655 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
ZNF543-201ENST00000321545 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
ZNF543-201ENST00000321545 ST18O60284 1047 aa13.69□□□□□ -0.22
ZNF543-201ENST00000321545 ITGA6P23229 1130 aa13.69□□□□□ -0.22
ZNF543-201ENST00000321545 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
ZNF543-201ENST00000321545 USPL1Q5W0Q7 1092 aa13.69□□□□□ -0.22
ZNF543-201ENST00000321545 EAF2Q96CJ1 260 aaPredicted RBP13.69□□□□□ -0.22
ZNF543-201ENST00000321545 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
ZNF543-201ENST00000321545 SLC4A8Q2Y0W8 1093 aa13.69□□□□□ -0.22
ZNF543-201ENST00000321545 NFAT5O94916 1531 aa13.69□□□□□ -0.22
ZNF543-201ENST00000321545 FAM196AQ6ZSG2 479 aa13.69□□□□□ -0.22
ZNF543-201ENST00000321545 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
ZNF543-201ENST00000321545 SSH3Q8TE77 659 aa13.68□□□□□ -0.22
ZNF543-201ENST00000321545 UTP14AQ9BVJ6 771 aaKnown RBP13.68□□□□□ -0.22
ZNF543-201ENST00000321545 MED1Q15648 1581 aaPredicted RBP13.68□□□□□ -0.22
ZNF543-201ENST00000321545 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
ZNF543-201ENST00000321545 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
ZNF543-201ENST00000321545 GREM2Q9H772 168 aa13.67□□□□□ -0.22
ZNF543-201ENST00000321545 SPATA31A5Q5VU36 1347 aa13.67□□□□□ -0.22
ZNF543-201ENST00000321545 SPATA31A7Q8IWB4 1347 aa13.67□□□□□ -0.22
ZNF543-201ENST00000321545 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
ZNF543-201ENST00000321545 ITPK1Q13572 414 aa13.67□□□□□ -0.22
ZNF543-201ENST00000321545 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
ZNF543-201ENST00000321545 CYP19A1P11511 503 aaPredicted RBP13.67□□□□□ -0.22
ZNF543-201ENST00000321545 SEC31BQ9NQW1 1179 aa13.67□□□□□ -0.22
ZNF543-201ENST00000321545 ANKIB1Q9P2G1 1089 aa13.67□□□□□ -0.22
ZNF543-201ENST00000321545 ZKSCAN1P17029 563 aaPredicted RBP13.66□□□□□ -0.22
ZNF543-201ENST00000321545 STK3Q13188 491 aa13.66□□□□□ -0.22
ZNF543-201ENST00000321545 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
ZNF543-201ENST00000321545 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
ZNF543-201ENST00000321545 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
ZNF543-201ENST00000321545 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
ZNF543-201ENST00000321545 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
ZNF543-201ENST00000321545 GIGYF2Q6Y7W6 1299 aaKnown RBP13.66□□□□□ -0.22
ZNF543-201ENST00000321545 OVOS2A0A0G2JMS6 1433 aa13.66□□□□□ -0.22
ZNF543-201ENST00000321545 A0A1B0GUL7 405 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 CPA1P15085 419 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 TBC1D2Q9BYX2 928 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 ATP2B3Q16720 1220 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 CCDC129Q6ZRS4 1044 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 SLC4A9Q96Q91 983 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 LTN1O94822 1766 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
ZNF543-201ENST00000321545 HAND2P61296 217 aa13.65□□□□□ -0.23
ZNF543-201ENST00000321545 SLFNL1Q499Z3 407 aa13.65□□□□□ -0.23
ZNF543-201ENST00000321545 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.23
ZNF543-201ENST00000321545 RRP12Q5JTH9 1297 aaKnown RBP13.64□□□□□ -0.23
ZNF543-201ENST00000321545 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
ZNF543-201ENST00000321545 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
ZNF543-201ENST00000321545 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
ZNF543-201ENST00000321545 SASH1O94885 1247 aa13.63□□□□□ -0.23
ZNF543-201ENST00000321545 TNNI3KQ59H18 835 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms