RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GDPD2Q9HCC8 539 aa18.67■□□□□ 0.58
SHROOM1-201ENST00000319854 CBX1P83916 185 aa18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 PXDNLA1KZ92 1463 aa18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 SGSM2O43147 1006 aa18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 SASH1O94885 1247 aa18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 DNTTIP2Q5QJE6 756 aaKnown RBP18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
SHROOM1-201ENST00000319854 GLRX3O76003 335 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 CACNA1FO60840 1977 aa18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 PTH1RQ03431 593 aa18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 LARP1Q6PKG0 1096 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 FAM227BQ96M60 508 aa18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 NEURL1BA8MQ27 555 aa18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 PRPF40BQ6NWY9 871 aaKnown RBP18.65■□□□□ 0.58
SHROOM1-201ENST00000319854 ZNF142P52746 1687 aaPredicted RBP18.64■□□□□ 0.58
SHROOM1-201ENST00000319854 MST1RQ04912 1400 aa18.64■□□□□ 0.57
SHROOM1-201ENST00000319854 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 GCKRQ14397 625 aa18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 ATP2B3Q16720 1220 aa18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 SNX14Q9Y5W7 946 aa18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 KAT6BQ8WYB5 2073 aa18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 CHGBP05060 677 aa18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 CASTP20810 708 aaKnown RBP18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 GPATCH3Q96I76 525 aa18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 MED1Q15648 1581 aaPredicted RBP18.63■□□□□ 0.57
SHROOM1-201ENST00000319854 SLIT3O75094 1523 aa18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 A0A087WZG4 1122 aa18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 HSPA4P34932 840 aa18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 UTP14CQ5TAP6 766 aaKnown RBP18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 DCAF5Q96JK2 942 aa18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 FMNL2Q96PY5 1086 aa18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 DNAJC5Q9H3Z4 198 aa18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 ZBTB3Q9H5J0 574 aa18.62■□□□□ 0.57
SHROOM1-201ENST00000319854 A1BGP04217 495 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 LSG1Q9H089 658 aaKnown RBP18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 TSPY26PQ9H489 355 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 ADCK5Q3MIX3 580 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 CCDC85AQ96PX6 553 aaPredicted RBP18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 TTC12Q9H892 705 aaPredicted RBP18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 NCAPD2Q15021 1401 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 KDM3BQ7LBC6 1761 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 A0A0G2JS52 829 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 JAKMIP1Q96N16 626 aaKnown RBP18.61■□□□□ 0.57
SHROOM1-201ENST00000319854 HEG1Q9ULI3 1381 aa18.6■□□□□ 0.57
SHROOM1-201ENST00000319854 USP54Q70EL1 1684 aa18.6■□□□□ 0.57
SHROOM1-201ENST00000319854 RAD50Q92878 1312 aa18.6■□□□□ 0.57
SHROOM1-201ENST00000319854 GADD45BO75293 160 aaPredicted RBP18.6■□□□□ 0.57
SHROOM1-201ENST00000319854 COL9A3Q14050 684 aaPredicted RBP18.6■□□□□ 0.57
SHROOM1-201ENST00000319854 AK2P54819 239 aa18.6■□□□□ 0.57
SHROOM1-201ENST00000319854 METTL22Q9BUU2 404 aaPredicted RBP18.6■□□□□ 0.57
SHROOM1-201ENST00000319854 AOX1Q06278 1338 aa18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 MTX1Q13505 466 aa18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 NOLC1Q14978 699 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 TTLL7Q6ZT98 887 aa18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 DNAJC2Q99543 621 aaKnown RBP18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 SPATA31A3Q5VYP0 1347 aa18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 ERC1Q8IUD2 1116 aa18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 LMO7Q8WWI1 1683 aa18.59■□□□□ 0.57
SHROOM1-201ENST00000319854 EVA1CP58658 441 aa18.58■□□□□ 0.57
SHROOM1-201ENST00000319854 NMIQ13287 307 aaPredicted RBP18.58■□□□□ 0.57
SHROOM1-201ENST00000319854 PPP4R3BQ5MIZ7 849 aa18.58■□□□□ 0.57
SHROOM1-201ENST00000319854 ANAPC15P60006 121 aa18.58■□□□□ 0.57
SHROOM1-201ENST00000319854 TFCP2Q12800 502 aa18.58■□□□□ 0.56
SHROOM1-201ENST00000319854 USP25Q9UHP3 1055 aa18.58■□□□□ 0.56
SHROOM1-201ENST00000319854 TTC41PQ6P2S7 1318 aa18.58■□□□□ 0.56
SHROOM1-201ENST00000319854 MBD3O95983 291 aa18.57■□□□□ 0.56
SHROOM1-201ENST00000319854 PIBF1Q8WXW3 757 aa18.57■□□□□ 0.56
SHROOM1-201ENST00000319854 LARGE1O95461 756 aa18.57■□□□□ 0.56
SHROOM1-201ENST00000319854 ZCRB1Q8TBF4 217 aaKnown RBP18.57■□□□□ 0.56
SHROOM1-201ENST00000319854 HDAC5Q9UQL6 1122 aa18.57■□□□□ 0.56
SHROOM1-201ENST00000319854 ZNF335Q9H4Z2 1342 aaPredicted RBP18.57■□□□□ 0.56
SHROOM1-201ENST00000319854 A0A0D9SFI3 127 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 SPDYE4A6NLX3 237 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 BRD1O95696 1058 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 MCM2P49736 904 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 LMBR1LQ6UX01 489 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 NEUROD6Q96NK8 337 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 CCDC83Q8IWF9 413 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 RUFY2Q8WXA3 655 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 FGD1P98174 961 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 SLFNL1Q499Z3 407 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 NECAB1Q8N987 351 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 TAF6LQ9Y6J9 622 aa18.56■□□□□ 0.56
SHROOM1-201ENST00000319854 TRPM3Q9HCF6 1732 aaPredicted RBP18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 NBPF26B4DH59 902 aa18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 NBPF14Q5TI25 921 aa18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 NBPF10Q6P3W6 841 aaKnown RBP18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 RUFY3Q7L099 469 aa18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 NBPF15Q8N660 670 aa18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 EVI5LQ96CN4 794 aa18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 GTF2F1P35269 517 aaKnown RBP eCLIP18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 TNS3Q68CZ2 1445 aa18.55■□□□□ 0.56
SHROOM1-201ENST00000319854 IGSF3O75054 1194 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms