RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ADRA2BP18089 450 aa19.37■□□□□ 0.69
PDLIM5-202ENST00000318007 NLRP10Q86W26 655 aa19.37■□□□□ 0.69
PDLIM5-202ENST00000318007 NUTM1Q86Y26 1132 aa19.37■□□□□ 0.69
PDLIM5-202ENST00000318007 ISCA1Q9BUE6 129 aa19.37■□□□□ 0.69
PDLIM5-202ENST00000318007 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
PDLIM5-202ENST00000318007 LRRFIP2Q9Y608 721 aaKnown RBP19.37■□□□□ 0.69
PDLIM5-202ENST00000318007 ALDH1L1O75891 902 aa19.36■□□□□ 0.69
PDLIM5-202ENST00000318007 HSP90AB3PQ58FF7 597 aa19.36■□□□□ 0.69
PDLIM5-202ENST00000318007 SUSD4Q5VX71 490 aa19.36■□□□□ 0.69
PDLIM5-202ENST00000318007 TRMT112Q9UI30 125 aaKnown RBP19.36■□□□□ 0.69
PDLIM5-202ENST00000318007 ANKRD36CQ5JPF3 1778 aa19.36■□□□□ 0.69
PDLIM5-202ENST00000318007 N4BP2Q86UW6 1770 aaPredicted RBP19.36■□□□□ 0.69
PDLIM5-202ENST00000318007 PSDA5PKW4 1024 aaPredicted RBP19.35■□□□□ 0.69
PDLIM5-202ENST00000318007 NPHP1O15259 732 aa19.35■□□□□ 0.69
PDLIM5-202ENST00000318007 R3HDM1Q15032 1099 aaKnown RBP19.35■□□□□ 0.69
PDLIM5-202ENST00000318007 PCDHB15Q9Y5E8 787 aa19.35■□□□□ 0.69
PDLIM5-202ENST00000318007 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
PDLIM5-202ENST00000318007 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
PDLIM5-202ENST00000318007 CCDC85AQ96PX6 553 aaPredicted RBP19.35■□□□□ 0.69
PDLIM5-202ENST00000318007 SETDB2Q96T68 719 aa19.34■□□□□ 0.69
PDLIM5-202ENST00000318007 NFIXQ14938 502 aa19.33■□□□□ 0.69
PDLIM5-202ENST00000318007 SUCLG2Q96I99 432 aa19.33■□□□□ 0.69
PDLIM5-202ENST00000318007 BCL11AQ9H165 835 aa19.33■□□□□ 0.69
PDLIM5-202ENST00000318007 CLEC4GQ6UXB4 293 aa19.33■□□□□ 0.68
PDLIM5-202ENST00000318007 GNAI3P08754 354 aa19.32■□□□□ 0.68
PDLIM5-202ENST00000318007 CCDC136Q96JN2 1154 aa19.32■□□□□ 0.68
PDLIM5-202ENST00000318007 GNAI2P04899 355 aa19.32■□□□□ 0.68
PDLIM5-202ENST00000318007 HMGB2P26583 209 aaKnown RBP19.32■□□□□ 0.68
PDLIM5-202ENST00000318007 GTF2E1P29083 439 aaPredicted RBP19.32■□□□□ 0.68
PDLIM5-202ENST00000318007 HCLS1P14317 486 aaPredicted RBP19.31■□□□□ 0.68
PDLIM5-202ENST00000318007 EPHA10Q5JZY3 1008 aa19.31■□□□□ 0.68
PDLIM5-202ENST00000318007 NBPF5PQ86XG9 351 aaPredicted RBP19.31■□□□□ 0.68
PDLIM5-202ENST00000318007 FLAD1Q8NFF5 587 aa19.31■□□□□ 0.68
PDLIM5-202ENST00000318007 BICC1Q9H694 974 aaKnown RBP19.31■□□□□ 0.68
PDLIM5-202ENST00000318007 CHMP3Q9Y3E7 222 aa19.31■□□□□ 0.68
PDLIM5-202ENST00000318007 UTP14AQ9BVJ6 771 aaKnown RBP19.3■□□□□ 0.68
PDLIM5-202ENST00000318007 UTRNP46939 3433 aa19.3■□□□□ 0.68
PDLIM5-202ENST00000318007 ZBTB7AO95365 584 aa19.3■□□□□ 0.68
PDLIM5-202ENST00000318007 ZBTB38Q8NAP3 1195 aaPredicted RBP19.3■□□□□ 0.68
PDLIM5-202ENST00000318007 NTSR2O95665 410 aa19.29■□□□□ 0.68
PDLIM5-202ENST00000318007 ERFEQ4G0M1 354 aa19.29■□□□□ 0.68
PDLIM5-202ENST00000318007 KAZALD1Q96I82 304 aa19.29■□□□□ 0.68
PDLIM5-202ENST00000318007 H7C1W4 665 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 DDR1Q08345 913 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 TRIM28Q13263 835 aaKnown RBP19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 PPP1R42Q7Z4L9 355 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 PNMA6EA0A0J9YXQ4 647 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 IRS4O14654 1257 aaPredicted RBP19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 MMP10P09238 476 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 CASP7P55210 303 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 PARP10Q53GL7 1025 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 CEP85Q6P2H3 762 aa19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 CHMP4BQ9H444 224 aaKnown RBP19.28■□□□□ 0.68
PDLIM5-202ENST00000318007 IGHDP01880 384 aa19.27■□□□□ 0.68
PDLIM5-202ENST00000318007 PCCAP05165 728 aaPredicted RBP19.27■□□□□ 0.68
PDLIM5-202ENST00000318007 SIRT2Q8IXJ6 389 aa19.27■□□□□ 0.68
PDLIM5-202ENST00000318007 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
PDLIM5-202ENST00000318007 CARMIL3Q8ND23 1372 aa19.27■□□□□ 0.68
PDLIM5-202ENST00000318007 ABCC12Q96J65 1359 aa19.26■□□□□ 0.67
PDLIM5-202ENST00000318007 UTYO14607 1347 aa19.26■□□□□ 0.67
PDLIM5-202ENST00000318007 SERPINB2P05120 415 aa19.26■□□□□ 0.67
PDLIM5-202ENST00000318007 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
PDLIM5-202ENST00000318007 APBB1O00213 710 aa19.25■□□□□ 0.67
PDLIM5-202ENST00000318007 SRGAP3O43295 1099 aa19.25■□□□□ 0.67
PDLIM5-202ENST00000318007 LMBR1LQ6UX01 489 aa19.25■□□□□ 0.67
PDLIM5-202ENST00000318007 NLGN1Q8N2Q7 840 aa19.25■□□□□ 0.67
PDLIM5-202ENST00000318007 CNBD1Q8NA66 436 aa19.25■□□□□ 0.67
PDLIM5-202ENST00000318007 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
PDLIM5-202ENST00000318007 POLRMTO00411 1230 aaKnown RBP19.24■□□□□ 0.67
PDLIM5-202ENST00000318007 TM4SF1P30408 202 aa19.24■□□□□ 0.67
PDLIM5-202ENST00000318007 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
PDLIM5-202ENST00000318007 C3orf67Q6ZVT6 689 aa19.24■□□□□ 0.67
PDLIM5-202ENST00000318007 FOXO4P98177 505 aa19.23■□□□□ 0.67
PDLIM5-202ENST00000318007 ANKRD44Q8N8A2 993 aa19.23■□□□□ 0.67
PDLIM5-202ENST00000318007 ERICH6BQ5W0A0 696 aa19.23■□□□□ 0.67
PDLIM5-202ENST00000318007 PRR5LQ6MZQ0 368 aa19.23■□□□□ 0.67
PDLIM5-202ENST00000318007 COL24A1Q17RW2 1714 aa19.22■□□□□ 0.67
PDLIM5-202ENST00000318007 QSER1Q2KHR3 1735 aa19.22■□□□□ 0.67
PDLIM5-202ENST00000318007 FAM161AQ3B820 660 aa19.22■□□□□ 0.67
PDLIM5-202ENST00000318007 NYXQ9GZU5 481 aa19.22■□□□□ 0.67
PDLIM5-202ENST00000318007 SIL1Q9H173 461 aa19.22■□□□□ 0.67
PDLIM5-202ENST00000318007 PA2G4Q9UQ80 394 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-202ENST00000318007 PARP3Q9Y6F1 533 aa19.22■□□□□ 0.67
PDLIM5-202ENST00000318007 SKAP1Q86WV1 359 aa19.21■□□□□ 0.67
PDLIM5-202ENST00000318007 CTSWP56202 376 aa19.21■□□□□ 0.67
PDLIM5-202ENST00000318007 GREM2Q9H772 168 aa19.21■□□□□ 0.67
PDLIM5-202ENST00000318007 EXOC6BQ9Y2D4 811 aa19.21■□□□□ 0.67
PDLIM5-202ENST00000318007 DDX60Q8IY21 1712 aaKnown RBP19.2■□□□□ 0.66
PDLIM5-202ENST00000318007 ZNF594Q96JF6 807 aaPredicted RBP19.2■□□□□ 0.66
PDLIM5-202ENST00000318007 CDHR2Q9BYE9 1310 aa19.2■□□□□ 0.66
PDLIM5-202ENST00000318007 PDE8AO60658 829 aa19.19■□□□□ 0.66
PDLIM5-202ENST00000318007 RPAP2Q8IXW5 612 aaPredicted RBP19.19■□□□□ 0.66
PDLIM5-202ENST00000318007 RGL2O15211 777 aa19.19■□□□□ 0.66
PDLIM5-202ENST00000318007 ST5P78524 1137 aa19.19■□□□□ 0.66
PDLIM5-202ENST00000318007 ATP8B2P98198 1209 aa19.19■□□□□ 0.66
PDLIM5-202ENST00000318007 AAMPQ13685 434 aa19.19■□□□□ 0.66
PDLIM5-202ENST00000318007 RWDD1Q9H446 243 aaPredicted RBP19.19■□□□□ 0.66
PDLIM5-202ENST00000318007 TNRC6CQ9HCJ0 1690 aaKnown RBP19.18■□□□□ 0.66
PDLIM5-202ENST00000318007 KLHL34Q8N239 644 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms