RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 RFX7Q2KHR2 1363 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 NASPP49321 788 aaPredicted RBP16.63■□□□□ 0.25
ATG4C-201ENST00000317868 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 G3BP1Q13283 466 aaKnown RBP eCLIP16.63■□□□□ 0.25
ATG4C-201ENST00000317868 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 TLR7Q9NYK1 1049 aaKnown RBP16.63■□□□□ 0.25
ATG4C-201ENST00000317868 LIMCH1Q9UPQ0 1083 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 ERBB4Q15303 1308 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 WDR33Q9C0J8 1336 aaKnown RBP16.63■□□□□ 0.25
ATG4C-201ENST00000317868 HIP1O00291 1037 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 VPS53Q5VIR6 699 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
ATG4C-201ENST00000317868 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
ATG4C-201ENST00000317868 MYH15Q9Y2K3 1946 aa16.62■□□□□ 0.25
ATG4C-201ENST00000317868 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
ATG4C-201ENST00000317868 NOL8Q76FK4 1167 aaKnown RBP16.62■□□□□ 0.25
ATG4C-201ENST00000317868 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
ATG4C-201ENST00000317868 MYD88Q99836 296 aa16.62■□□□□ 0.25
ATG4C-201ENST00000317868 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
ATG4C-201ENST00000317868 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.62■□□□□ 0.25
ATG4C-201ENST00000317868 MYL6BP14649 208 aa16.62■□□□□ 0.25
ATG4C-201ENST00000317868 CABLES1Q8TDN4 633 aa16.62■□□□□ 0.25
ATG4C-201ENST00000317868 ADCK5Q3MIX3 580 aa16.61■□□□□ 0.25
ATG4C-201ENST00000317868 LRSAM1Q6UWE0 723 aa16.61■□□□□ 0.25
ATG4C-201ENST00000317868 RBM27Q9P2N5 1060 aaKnown RBP16.61■□□□□ 0.25
ATG4C-201ENST00000317868 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
ATG4C-201ENST00000317868 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
ATG4C-201ENST00000317868 ST3GAL1Q11201 340 aa16.6■□□□□ 0.25
ATG4C-201ENST00000317868 CHRNA2Q15822 529 aa16.6■□□□□ 0.25
ATG4C-201ENST00000317868 RBSNQ9H1K0 784 aa16.6■□□□□ 0.25
ATG4C-201ENST00000317868 LARGE1O95461 756 aa16.59■□□□□ 0.25
ATG4C-201ENST00000317868 PRIM1P49642 420 aaKnown RBP16.59■□□□□ 0.25
ATG4C-201ENST00000317868 NMIQ13287 307 aaPredicted RBP16.59■□□□□ 0.25
ATG4C-201ENST00000317868 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
ATG4C-201ENST00000317868 CCDC8Q9H0W5 538 aaPredicted RBP16.59■□□□□ 0.25
ATG4C-201ENST00000317868 ITGB4P16144 1822 aa16.59■□□□□ 0.25
ATG4C-201ENST00000317868 TTC5Q8N0Z6 440 aa16.59■□□□□ 0.25
ATG4C-201ENST00000317868 FAM227BQ96M60 508 aa16.59■□□□□ 0.25
ATG4C-201ENST00000317868 PRPF40BQ6NWY9 871 aaKnown RBP16.59■□□□□ 0.25
ATG4C-201ENST00000317868 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
ATG4C-201ENST00000317868 ALDH8A1Q9H2A2 487 aaPredicted RBP16.59■□□□□ 0.25
ATG4C-201ENST00000317868 WDR17Q8IZU2 1322 aa16.59■□□□□ 0.25
ATG4C-201ENST00000317868 A0A0D9SFI3 127 aa16.58■□□□□ 0.24
ATG4C-201ENST00000317868 ESPNB1AK53 854 aa16.58■□□□□ 0.24
ATG4C-201ENST00000317868 PLBD2Q8NHP8 589 aa16.58■□□□□ 0.24
ATG4C-201ENST00000317868 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.58■□□□□ 0.24
ATG4C-201ENST00000317868 RBM8AQ9Y5S9 174 aaKnown RBP16.58■□□□□ 0.24
ATG4C-201ENST00000317868 DDX60Q8IY21 1712 aaKnown RBP16.58■□□□□ 0.24
ATG4C-201ENST00000317868 TSGA10IPQ3SY00 556 aa16.58■□□□□ 0.24
ATG4C-201ENST00000317868 CREB3L3Q68CJ9 461 aa16.58■□□□□ 0.24
ATG4C-201ENST00000317868 ANKRD36CQ5JPF3 1778 aa16.58■□□□□ 0.24
ATG4C-201ENST00000317868 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
ATG4C-201ENST00000317868 ATP5JP18859 108 aa16.57■□□□□ 0.24
ATG4C-201ENST00000317868 NKX1-1Q15270 411 aaPredicted RBP16.57■□□□□ 0.24
ATG4C-201ENST00000317868 FOXD4L5Q5VV16 416 aaPredicted RBP16.57■□□□□ 0.24
ATG4C-201ENST00000317868 FOXD4L4Q8WXT5 416 aaPredicted RBP16.57■□□□□ 0.24
ATG4C-201ENST00000317868 ZSCAN31Q96LW9 406 aaPredicted RBP16.57■□□□□ 0.24
ATG4C-201ENST00000317868 SH2B1Q9NRF2 756 aaPredicted RBP16.57■□□□□ 0.24
ATG4C-201ENST00000317868 ZSCAN22P10073 491 aaPredicted RBP16.57■□□□□ 0.24
ATG4C-201ENST00000317868 CPA1P15085 419 aa16.57■□□□□ 0.24
ATG4C-201ENST00000317868 NCLP19338 710 aaKnown RBP16.57■□□□□ 0.24
ATG4C-201ENST00000317868 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
ATG4C-201ENST00000317868 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
ATG4C-201ENST00000317868 SYT1P21579 422 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 USPL1Q5W0Q7 1092 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 BRINP3Q76B58 766 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
ATG4C-201ENST00000317868 SIL1Q9H173 461 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 PDRG1Q9NUG6 133 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 DBNLQ9UJU6 430 aaKnown RBP16.56■□□□□ 0.24
ATG4C-201ENST00000317868 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 MYH7P12883 1935 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 SOS2Q07890 1332 aaPredicted RBP16.56■□□□□ 0.24
ATG4C-201ENST00000317868 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 CYP46A1Q9Y6A2 500 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 SLC27A2O14975 620 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 STX6O43752 255 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 CABP4P57796 275 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
ATG4C-201ENST00000317868 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
ATG4C-201ENST00000317868 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
ATG4C-201ENST00000317868 PLCH1Q4KWH8 1693 aa16.55■□□□□ 0.24
ATG4C-201ENST00000317868 H7C1W4 665 aa16.55■□□□□ 0.24
ATG4C-201ENST00000317868 USP48Q86UV5 1035 aa16.55■□□□□ 0.24
ATG4C-201ENST00000317868 MYH3P11055 1940 aa16.55■□□□□ 0.24
ATG4C-201ENST00000317868 SYCE3A1L190 88 aa16.54■□□□□ 0.24
ATG4C-201ENST00000317868 ERVV-2B6SEH9 535 aa16.54■□□□□ 0.24
ATG4C-201ENST00000317868 F13A1P00488 732 aa16.54■□□□□ 0.24
ATG4C-201ENST00000317868 PIP4K2AP48426 406 aaPredicted RBP16.54■□□□□ 0.24
ATG4C-201ENST00000317868 FOXO4P98177 505 aa16.54■□□□□ 0.24
ATG4C-201ENST00000317868 GADD45BO75293 160 aaPredicted RBP16.54■□□□□ 0.24
ATG4C-201ENST00000317868 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
ATG4C-201ENST00000317868 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
ATG4C-201ENST00000317868 ZNF609O15014 1411 aa16.54■□□□□ 0.24
ATG4C-201ENST00000317868 ME3Q16798 604 aa16.53■□□□□ 0.24
ATG4C-201ENST00000317868 ZNF589Q86UQ0 364 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms