RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 RXRAP19793 462 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 ZNF592Q92610 1267 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 KIF3AQ9Y496 699 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 MRVI1Q9Y6F6 885 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 ACEP12821 1306 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 CACNA1SQ13698 1873 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 MADDQ8WXG6 1647 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 SLC4A2P04920 1241 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 JAG2Q9Y219 1238 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 GYS2P54840 703 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 EIF4A2Q14240 407 aaKnown RBP4.32□□□□□ -1.72
GEN1-201ENST00000317402 GIMAP7Q8NHV1 300 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 MAPK8IP3Q9UPT6 1336 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 MLH3Q9UHC1 1453 aa4.32□□□□□ -1.72
GEN1-201ENST00000317402 PLEKHM2Q8IWE5 1019 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 RUNDC1Q96C34 613 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 CPS1P31327 1500 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 ANKRD65E5RJM6 399 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 PI16Q6UXB8 463 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 TEX2Q8IWB9 1127 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 AXIN2Q9Y2T1 843 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 ABCA4P78363 2273 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 CASP8AP2Q9UKL3 1982 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 A1BGP04217 495 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 SRRTQ9BXP5 876 aaKnown RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 LRRC7Q96NW7 1537 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 CMTR1Q8N1G2 835 aaKnown RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 RBM28Q9NW13 759 aaKnown RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 USP25Q9UHP3 1055 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 CADP27708 2225 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 ARHGAP31Q2M1Z3 1444 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 NUTM2BA6NNL0 878 aaPredicted RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 NUTM2EB1AL46 878 aaPredicted RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 LETM1O95202 739 aaPredicted RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 KCNA6P17658 529 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 NUTM2AQ8IVF1 878 aaPredicted RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 FAM227BQ96M60 508 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 STRN4Q9NRL3 753 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 CALCOCO1Q9P1Z2 691 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 AMOTL2Q9Y2J4 779 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 RIMS1Q86UR5 1692 aaKnown RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 NLRP6P59044 892 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 ZSCAN23Q3MJ62 389 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 PPP4R3BQ5MIZ7 849 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 AGLP35573 1532 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 NOC3LQ8WTT2 800 aaKnown RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 GPATCH3Q96I76 525 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 C14orf93Q9H972 538 aaKnown RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 POLD4Q9HCU8 107 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 CLTCL1P53675 1640 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 HEATR5AQ86XA9 2040 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 PDE6BP35913 854 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 LRRFIP1Q32MZ4 808 aaKnown RBP4.31□□□□□ -1.72
GEN1-201ENST00000317402 TRIM63Q969Q1 353 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 PTPRTO14522 1441 aa4.31□□□□□ -1.72
GEN1-201ENST00000317402 DDX11L8A8MPP1 907 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 SPECC1Q5M775 1068 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 FKBP15Q5T1M5 1219 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 LARP1BQ659C4 914 aaKnown RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 RASGRP2Q7LDG7 609 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 SECISBP2LQ93073 1101 aaKnown RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 SENP2Q9HC62 589 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 ZBTB12Q9Y330 459 aaPredicted RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 YY1P25490 414 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 DDIT3P35638 169 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 TWISTNBQ3B726 338 aaPredicted RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 CKAP2LQ8IYA6 745 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 SMAP1Q8IYB5 467 aaPredicted RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 TIGD1Q96MW7 591 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 LMBRD1Q9NUN5 540 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 MRPS25P82663 173 aaKnown RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 KCNF1Q9H3M0 494 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 ALPK2Q86TB3 2170 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 KNDC1Q76NI1 1749 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 AMPHP49418 695 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 MCM3APO60318 1980 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 BAG4O95429 457 aaKnown RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 CWC27Q6UX04 472 aaKnown RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 ACSBG1Q96GR2 724 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 ZNF594Q96JF6 807 aaPredicted RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 MTMR7Q9Y216 660 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 CAMSAP1Q5T5Y3 1602 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 ASXL1Q8IXJ9 1541 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 CLTCQ00610 1675 aaKnown RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 TRIM6-TRIM34B2RNG4 842 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 CT47B1P0C2W7 299 aaPredicted RBP4.3□□□□□ -1.72
GEN1-201ENST00000317402 ABTB2Q8N961 1025 aa4.3□□□□□ -1.72
GEN1-201ENST00000317402 NKTRP30414 1462 aaKnown RBP4.29□□□□□ -1.72
GEN1-201ENST00000317402 PLEKHG2Q9H7P9 1386 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 MYOFQ9NZM1 2061 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 SKIDA1Q1XH10 827 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 CCDC83Q8IWF9 413 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 PLEKHA4Q9H4M7 779 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 RABEP2Q9H5N1 569 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 TFR2Q9UP52 801 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 H0YHG0 523 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 SARNPP82979 210 aaKnown RBP4.29□□□□□ -1.72
GEN1-201ENST00000317402 EPHA10Q5JZY3 1008 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 EYA1Q99502 592 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 DDX49Q9Y6V7 483 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms