RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 KIF4BQ2VIQ3 1234 aa5.2□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC181Q5TID7 509 aa5.2□□□□□ -1.58
CNOT1-201ENST00000317147 VPS36Q86VN1 386 aa5.2□□□□□ -1.58
CNOT1-201ENST00000317147 C10orf67Q8IYJ2 551 aa5.2□□□□□ -1.58
CNOT1-201ENST00000317147 PPP1R1BQ9UD71 204 aaPredicted RBP5.2□□□□□ -1.58
CNOT1-201ENST00000317147 LRRFIP2Q9Y608 721 aaKnown RBP5.2□□□□□ -1.58
CNOT1-201ENST00000317147 LAMA4Q16363 1823 aa5.2□□□□□ -1.58
CNOT1-201ENST00000317147 CEP350Q5VT06 3117 aa5.2□□□□□ -1.58
CNOT1-201ENST00000317147 STX6O43752 255 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 IFI16Q16666 785 aaKnown RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 KCNG4Q8TDN1 519 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 RILPL2Q969X0 211 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 TSGA10Q9BZW7 698 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 GEMIN8Q9NWZ8 242 aaKnown RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 CTAGE9A4FU28 777 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 KIF3CO14782 793 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 GLRX3O76003 335 aaKnown RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 CLSTN1O94985 981 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 RBBP5Q15291 538 aaKnown RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 FAM114A1Q8IWE2 563 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 COG3Q96JB2 828 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 C16orf45Q96MC5 204 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.19□□□□□ -1.585e-7■■□□□ 11.5
CNOT1-201ENST00000317147 ABCC5O15440 1437 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 TRPM1Q7Z4N2 1603 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 KNTC1P50748 2209 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 CACNA1IQ9P0X4 2223 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC175P0C221 793 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 G3BP1Q13283 466 aaKnown RBP eCLIP5.19□□□□□ -1.581e-6■■■□□ 16.5
CNOT1-201ENST00000317147 GAS2L2Q8NHY3 880 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 CEP170Q5SW79 1584 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 USO1O60763 962 aaKnown RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 TOP1P11387 765 aaKnown RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 KCNJ6P48051 423 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 MYO1AQ9UBC5 1043 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 MYOM2P54296 1465 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 MYO7AQ13402 2215 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 CACNA1DQ01668 2161 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 NDC80O14777 642 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 TRHP20396 242 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 PPP2R5EQ16537 467 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 TRIM22Q8IYM9 498 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 TRIM34Q9BYJ4 488 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 CDK5RAP2Q96SN8 1893 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 UBTFL1P0CB47 393 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-201ENST00000317147 WASHC4Q2M389 1173 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 ERICH4A6NGS2 130 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 KDM4AO75164 1064 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 PRPHP41219 470 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 PPP1R2P41236 205 aa5.19□□□□□ -1.58
CNOT1-201ENST00000317147 ERICH2A1L162 156 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CAPN2P17655 700 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 NBPF9Q3BBW0 867 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 ANKRD24Q8TF21 1146 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 GDAP1L1Q96MZ0 367 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 SRGAP3O43295 1099 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 ZSCAN22P10073 491 aaPredicted RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 BLOC1S2Q6QNY1 142 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CCAR1Q8IX12 1150 aaKnown RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 MRVI1Q9Y6F6 885 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CHD5Q8TDI0 1954 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 EFCAB8A8MWE9 144 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 LMAN1P49257 510 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 C6orf163Q5TEZ5 329 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 ZSCAN25Q6NSZ9 544 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 RNF168Q8IYW5 571 aaPredicted RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 MRFAP1L1Q96HT8 127 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 KIAA0556O60303 1618 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CCDC172P0C7W6 258 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 ME1P48163 572 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 NLRP5P59047 1200 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 NOB1Q9ULX3 412 aaKnown RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 TRAPPC8Q9Y2L5 1435 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 YEATS4O95619 227 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 PAFAH1B1P43034 410 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 ZKSCAN8Q15776 578 aaPredicted RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 RBM26Q5T8P6 1007 aaKnown RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 TTC22Q5TAA0 569 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CNGA4Q8IV77 575 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CTAGE15A4D2H0 777 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CTAGE8P0CG41 777 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 SKILP12757 684 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CTAGE6Q86UF2 777 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 TEX2Q8IWB9 1127 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CTAGE4Q8IX94 777 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 FAM76AQ8TAV0 307 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CDC42BPBQ9Y5S2 1711 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 PATL2C9JE40 543 aaKnown RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 GBP1P32455 592 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 MSL1Q68DK7 614 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 U3KPZ7 1027 aaPredicted RBP5.18□□□□□ -1.58
CNOT1-201ENST00000317147 CEP152O94986 1710 aa5.18□□□□□ -1.58
CNOT1-201ENST00000317147 ADAMTS12P58397 1594 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SAMD9LQ8IVG5 1584 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 CACNA2D4Q7Z3S7 1137 aa5.17□□□□□ -1.58
CNOT1-201ENST00000317147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 ZNF526Q8TF50 670 aaPredicted RBP5.17□□□□□ -1.58
CNOT1-201ENST00000317147 TSKSQ9UJT2 592 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms