RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
FOXR1-201ENST00000317011 XAGE3Q8WTP9 111 aa20.32■□□□□ 0.84
FOXR1-201ENST00000317011 ZNF316A6NFI3 1004 aaPredicted RBP20.31■□□□□ 0.84
FOXR1-201ENST00000317011 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
FOXR1-201ENST00000317011 TCIRG1Q13488 830 aa20.31■□□□□ 0.84
FOXR1-201ENST00000317011 C3orf67Q6ZVT6 689 aa20.31■□□□□ 0.84
FOXR1-201ENST00000317011 SYNE4Q8N205 404 aa20.31■□□□□ 0.84
FOXR1-201ENST00000317011 PSMD1Q99460 953 aa20.31■□□□□ 0.84
FOXR1-201ENST00000317011 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
FOXR1-201ENST00000317011 TNRC6CQ9HCJ0 1690 aaKnown RBP20.31■□□□□ 0.84
FOXR1-201ENST00000317011 DICER1Q9UPY3 1922 aaKnown RBP20.31■□□□□ 0.84
FOXR1-201ENST00000317011 WDR90Q96KV7 1748 aa20.3■□□□□ 0.84
FOXR1-201ENST00000317011 APAF1O14727 1248 aa20.3■□□□□ 0.84
FOXR1-201ENST00000317011 GRIPAP1Q4V328 841 aa20.3■□□□□ 0.84
FOXR1-201ENST00000317011 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
FOXR1-201ENST00000317011 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
FOXR1-201ENST00000317011 L3MBTL3Q96JM7 780 aaPredicted RBP20.3■□□□□ 0.84
FOXR1-201ENST00000317011 ZNF277Q9NRM2 450 aaPredicted RBP20.3■□□□□ 0.84
FOXR1-201ENST00000317011 LAS1LQ9Y4W2 734 aaKnown RBP20.3■□□□□ 0.84
FOXR1-201ENST00000317011 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
FOXR1-201ENST00000317011 FZD9O00144 591 aa20.29■□□□□ 0.84
FOXR1-201ENST00000317011 NLRP10Q86W26 655 aa20.29■□□□□ 0.84
FOXR1-201ENST00000317011 RBM17Q96I25 401 aaKnown RBP20.29■□□□□ 0.84
FOXR1-201ENST00000317011 NLRP3Q96P20 1036 aa20.29■□□□□ 0.84
FOXR1-201ENST00000317011 AIMP1Q12904 312 aaKnown RBP20.28■□□□□ 0.84
FOXR1-201ENST00000317011 MBIPQ9NS73 344 aa20.28■□□□□ 0.84
FOXR1-201ENST00000317011 CHPF2Q9P2E5 772 aa20.28■□□□□ 0.84
FOXR1-201ENST00000317011 IARSP41252 1262 aaKnown RBP20.27■□□□□ 0.84
FOXR1-201ENST00000317011 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
FOXR1-201ENST00000317011 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
FOXR1-201ENST00000317011 DBF4Q9UBU7 674 aaPredicted RBP20.27■□□□□ 0.84
FOXR1-201ENST00000317011 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
FOXR1-201ENST00000317011 ANKRD13DQ6ZTN6 518 aa20.26■□□□□ 0.83
FOXR1-201ENST00000317011 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
FOXR1-201ENST00000317011 IFT57Q9NWB7 429 aa20.26■□□□□ 0.83
FOXR1-201ENST00000317011 TIAM2Q8IVF5 1701 aa20.25■□□□□ 0.83
FOXR1-201ENST00000317011 HTRA3P83110 453 aa20.25■□□□□ 0.83
FOXR1-201ENST00000317011 CCDC184Q52MB2 194 aa20.25■□□□□ 0.83
FOXR1-201ENST00000317011 JMYQ8N9B5 988 aa20.25■□□□□ 0.83
FOXR1-201ENST00000317011 KLRG1Q96E93 195 aa20.25■□□□□ 0.83
FOXR1-201ENST00000317011 ISCA1Q9BUE6 129 aa20.25■□□□□ 0.83
FOXR1-201ENST00000317011 TRIM28Q13263 835 aaKnown RBP20.24■□□□□ 0.83
FOXR1-201ENST00000317011 HYPKQ9NX55 129 aa20.24■□□□□ 0.83
FOXR1-201ENST00000317011 BBOX1O75936 387 aa20.23■□□□□ 0.83
FOXR1-201ENST00000317011 GNAI1P63096 354 aa20.23■□□□□ 0.83
FOXR1-201ENST00000317011 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
FOXR1-201ENST00000317011 TAF1DQ9H5J8 278 aaPredicted RBP20.23■□□□□ 0.83
FOXR1-201ENST00000317011 ATP6V0A2Q9Y487 856 aa20.23■□□□□ 0.83
FOXR1-201ENST00000317011 ZNF541Q9H0D2 1346 aa20.23■□□□□ 0.83
FOXR1-201ENST00000317011 IQCA1LA6NCM1 817 aa20.22■□□□□ 0.83
FOXR1-201ENST00000317011 PPEF1O14829 653 aaPredicted RBP20.22■□□□□ 0.83
FOXR1-201ENST00000317011 VPS33BQ9H267 617 aa20.22■□□□□ 0.83
FOXR1-201ENST00000317011 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
FOXR1-201ENST00000317011 POTEIP0CG38 1075 aa20.21■□□□□ 0.83
FOXR1-201ENST00000317011 POTEJP0CG39 1038 aa20.21■□□□□ 0.83
FOXR1-201ENST00000317011 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
FOXR1-201ENST00000317011 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
FOXR1-201ENST00000317011 CHADLQ6NUI6 762 aa20.21■□□□□ 0.83
FOXR1-201ENST00000317011 SLC51AQ86UW1 340 aa20.21■□□□□ 0.83
FOXR1-201ENST00000317011 RTFDC1Q9BY42 306 aaPredicted RBP20.21■□□□□ 0.83
FOXR1-201ENST00000317011 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
FOXR1-201ENST00000317011 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
FOXR1-201ENST00000317011 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
FOXR1-201ENST00000317011 SP8Q8IXZ3 490 aa20.2■□□□□ 0.82
FOXR1-201ENST00000317011 GPC2Q8N158 579 aa20.2■□□□□ 0.82
FOXR1-201ENST00000317011 ABCC4O15439 1325 aa20.2■□□□□ 0.82
FOXR1-201ENST00000317011 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
FOXR1-201ENST00000317011 JDP2Q8WYK2 163 aa20.19■□□□□ 0.82
FOXR1-201ENST00000317011 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
FOXR1-201ENST00000317011 LDHDQ86WU2 507 aa20.18■□□□□ 0.82
FOXR1-201ENST00000317011 HACL1Q9UJ83 578 aa20.17■□□□□ 0.82
FOXR1-201ENST00000317011 COL4A5P29400 1685 aa20.16■□□□□ 0.82
FOXR1-201ENST00000317011 ATP5J2-PTCD1G3V325 749 aa20.16■□□□□ 0.82
FOXR1-201ENST00000317011 ELL2O00472 640 aaPredicted RBP20.16■□□□□ 0.82
FOXR1-201ENST00000317011 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
FOXR1-201ENST00000317011 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
FOXR1-201ENST00000317011 GRAPQ13588 217 aa20.16■□□□□ 0.82
FOXR1-201ENST00000317011 GRAPLQ8TC17 118 aaPredicted RBP20.16■□□□□ 0.82
FOXR1-201ENST00000317011 PHAXQ9H814 394 aaKnown RBP20.16■□□□□ 0.82
FOXR1-201ENST00000317011 PASKQ96RG2 1323 aa20.16■□□□□ 0.82
FOXR1-201ENST00000317011 EPHX2P34913 555 aa20.15■□□□□ 0.82
FOXR1-201ENST00000317011 EIF6P56537 245 aaKnown RBP20.15■□□□□ 0.82
FOXR1-201ENST00000317011 DDX46Q7L014 1031 aaKnown RBP20.15■□□□□ 0.82
FOXR1-201ENST00000317011 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
FOXR1-201ENST00000317011 LARGE2Q8N3Y3 721 aa20.15■□□□□ 0.82
FOXR1-201ENST00000317011 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
FOXR1-201ENST00000317011 CHMP4AQ9BY43 222 aa20.15■□□□□ 0.82
FOXR1-201ENST00000317011 SCN4AP35499 1836 aa20.14■□□□□ 0.81
FOXR1-201ENST00000317011 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
FOXR1-201ENST00000317011 PNMA8AQ86V59 439 aaPredicted RBP20.14■□□□□ 0.81
FOXR1-201ENST00000317011 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
FOXR1-201ENST00000317011 SUPT20HQ8NEM7 779 aa20.13■□□□□ 0.81
FOXR1-201ENST00000317011 TMX4Q9H1E5 349 aaPredicted RBP20.13■□□□□ 0.81
FOXR1-201ENST00000317011 CREBZFQ9NS37 354 aa20.13■□□□□ 0.81
FOXR1-201ENST00000317011 PCNTO95613 3336 aa20.12■□□□□ 0.81
FOXR1-201ENST00000317011 IFFO2Q5TF58 517 aa20.12■□□□□ 0.81
FOXR1-201ENST00000317011 CCDC30Q5VVM6 783 aa20.12■□□□□ 0.81
FOXR1-201ENST00000317011 RIC3Q7Z5B4 369 aa20.12■□□□□ 0.81
FOXR1-201ENST00000317011 MPNDQ8N594 471 aa20.12■□□□□ 0.81
FOXR1-201ENST00000317011 ZBTB38Q8NAP3 1195 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms