RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MYD88Q99836 296 aa20.71■□□□□ 0.91
SCAMP4-201ENST00000316097 TSPY26PQ9H489 355 aa20.71■□□□□ 0.91
SCAMP4-201ENST00000316097 EXOC5O00471 708 aa20.71■□□□□ 0.91
SCAMP4-201ENST00000316097 DDX58O95786 925 aaKnown RBP20.71■□□□□ 0.91
SCAMP4-201ENST00000316097 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
SCAMP4-201ENST00000316097 PLEKHG2Q9H7P9 1386 aa20.71■□□□□ 0.91
SCAMP4-201ENST00000316097 ATP5J2-PTCD1G3V325 749 aa20.7■□□□□ 0.9
SCAMP4-201ENST00000316097 BRD1O95696 1058 aa20.7■□□□□ 0.9
SCAMP4-201ENST00000316097 NOL8Q76FK4 1167 aaKnown RBP20.7■□□□□ 0.9
SCAMP4-201ENST00000316097 SHANK3Q9BYB0 1731 aa20.7■□□□□ 0.9
SCAMP4-201ENST00000316097 IL1RAPL2Q9NP60 686 aa20.7■□□□□ 0.9
SCAMP4-201ENST00000316097 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
SCAMP4-201ENST00000316097 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.7■□□□□ 0.93e-7■■■□□ 16.4
SCAMP4-201ENST00000316097 KIAA2012Q0VF49 1180 aa20.69■□□□□ 0.9
SCAMP4-201ENST00000316097 FOXD4L6Q3SYB3 417 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-201ENST00000316097 FOXD4L3Q6VB84 417 aaPredicted RBP20.69■□□□□ 0.9
SCAMP4-201ENST00000316097 SURF6O75683 361 aaKnown RBP20.69■□□□□ 0.9
SCAMP4-201ENST00000316097 LINS1Q8NG48 757 aa20.69■□□□□ 0.9
SCAMP4-201ENST00000316097 COL14A1Q05707 1796 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-201ENST00000316097 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
SCAMP4-201ENST00000316097 TTLL7Q6ZT98 887 aa20.68■□□□□ 0.9
SCAMP4-201ENST00000316097 DNTTIP2Q5QJE6 756 aaKnown RBP20.68■□□□□ 0.9
SCAMP4-201ENST00000316097 SSH3Q8TE77 659 aa20.68■□□□□ 0.9
SCAMP4-201ENST00000316097 MPNDQ8N594 471 aa20.67■□□□□ 0.9
SCAMP4-201ENST00000316097 KAZALD1Q96I82 304 aa20.67■□□□□ 0.9
SCAMP4-201ENST00000316097 SUCLG2Q96I99 432 aa20.67■□□□□ 0.9
SCAMP4-201ENST00000316097 LRRCC1Q9C099 1032 aa20.67■□□□□ 0.9
SCAMP4-201ENST00000316097 ATG3Q9NT62 314 aa20.67■□□□□ 0.9
SCAMP4-201ENST00000316097 ALDH1L1O75891 902 aa20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 SYAP1Q96A49 352 aaPredicted RBP20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 COL22A1Q8NFW1 1626 aaPredicted RBP20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 DISP2A7MBM2 1401 aa20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 GRM8O00222 908 aa20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 C8orf37Q96NL8 207 aa20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 GDPD2Q9HCC8 539 aa20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 PA2G4Q9UQ80 394 aaKnown RBP20.66■□□□□ 0.9
SCAMP4-201ENST00000316097 SPATA31A1Q5TZJ5 1347 aa20.65■□□□□ 0.9
SCAMP4-201ENST00000316097 NEURL1BA8MQ27 555 aa20.65■□□□□ 0.9
SCAMP4-201ENST00000316097 PDE1AP54750 535 aa20.65■□□□□ 0.9
SCAMP4-201ENST00000316097 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
SCAMP4-201ENST00000316097 METTL22Q9BUU2 404 aaPredicted RBP20.65■□□□□ 0.9
SCAMP4-201ENST00000316097 MCM2P49736 904 aa20.65■□□□□ 0.9
SCAMP4-201ENST00000316097 DNAJC10Q8IXB1 793 aa20.65■□□□□ 0.9
SCAMP4-201ENST00000316097 NEXNQ0ZGT2 675 aa20.64■□□□□ 0.9
SCAMP4-201ENST00000316097 POLA2Q14181 598 aa20.64■□□□□ 0.9
SCAMP4-201ENST00000316097 ZBTB3Q9H5J0 574 aa20.64■□□□□ 0.9
SCAMP4-201ENST00000316097 PALD1Q9ULE6 856 aa20.64■□□□□ 0.9
SCAMP4-201ENST00000316097 GLI3P10071 1580 aa20.64■□□□□ 0.89
SCAMP4-201ENST00000316097 CUL4AQ13619 759 aa20.64■□□□□ 0.89
SCAMP4-201ENST00000316097 BICC1Q9H694 974 aaKnown RBP20.64■□□□□ 0.89
SCAMP4-201ENST00000316097 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.89
SCAMP4-201ENST00000316097 KCPQ6ZWJ8 1503 aa20.63■□□□□ 0.89
SCAMP4-201ENST00000316097 GADD45BO75293 160 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-201ENST00000316097 GCKRQ14397 625 aa20.63■□□□□ 0.89
SCAMP4-201ENST00000316097 SMAP1Q8IYB5 467 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-201ENST00000316097 NUTM1Q86Y26 1132 aa20.63■□□□□ 0.89
SCAMP4-201ENST00000316097 ZNF830Q96NB3 372 aaPredicted RBP20.63■□□□□ 0.89
SCAMP4-201ENST00000316097 PRDM10Q9NQV6 1147 aa20.63■□□□□ 0.89
SCAMP4-201ENST00000316097 DDB1Q16531 1140 aa20.62■□□□□ 0.89
SCAMP4-201ENST00000316097 EPHA10Q5JZY3 1008 aa20.62■□□□□ 0.89
SCAMP4-201ENST00000316097 KLHDC4Q8TBB5 520 aa20.62■□□□□ 0.89
SCAMP4-201ENST00000316097 MYRIPQ8NFW9 859 aa20.62■□□□□ 0.89
SCAMP4-201ENST00000316097 SLC4A9Q96Q91 983 aa20.62■□□□□ 0.89
SCAMP4-201ENST00000316097 MCCP23508 829 aa20.61■□□□□ 0.89
SCAMP4-201ENST00000316097 NGLY1Q96IV0 654 aa20.61■□□□□ 0.89
SCAMP4-201ENST00000316097 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
SCAMP4-201ENST00000316097 OSBPL3Q9H4L5 887 aa20.61■□□□□ 0.89
SCAMP4-201ENST00000316097 PHF14O94880 888 aa20.61■□□□□ 0.89
SCAMP4-201ENST00000316097 ANO2Q9NQ90 1003 aa20.61■□□□□ 0.89
SCAMP4-201ENST00000316097 USP25Q9UHP3 1055 aa20.61■□□□□ 0.89
SCAMP4-201ENST00000316097 UBE3BQ7Z3V4 1068 aa20.6■□□□□ 0.89
SCAMP4-201ENST00000316097 MARCH10Q8NA82 808 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-201ENST00000316097 TSC1Q92574 1164 aa20.6■□□□□ 0.89
SCAMP4-201ENST00000316097 INTS4Q96HW7 963 aaKnown RBP20.6■□□□□ 0.89
SCAMP4-201ENST00000316097 PLBD2Q8NHP8 589 aa20.6■□□□□ 0.89
SCAMP4-201ENST00000316097 RHPN1Q8TCX5 695 aa20.6■□□□□ 0.89
SCAMP4-201ENST00000316097 N4BP2Q86UW6 1770 aaPredicted RBP20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 FAM98CQ17RN3 349 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 USP48Q86UV5 1035 aa20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 CCDC94Q9BW85 323 aaPredicted RBP20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 UPF3BQ9BZI7 483 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 PLCH1Q4KWH8 1693 aa20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 OS9Q13438 667 aaPredicted RBP20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 SIL1Q9H173 461 aa20.59■□□□□ 0.89
SCAMP4-201ENST00000316097 SPATA31A5Q5VU36 1347 aa20.58■□□□□ 0.89
SCAMP4-201ENST00000316097 SPATA31A7Q8IWB4 1347 aa20.58■□□□□ 0.89
SCAMP4-201ENST00000316097 A0A087WZG4 1122 aa20.58■□□□□ 0.89
SCAMP4-201ENST00000316097 TNS2Q63HR2 1409 aa20.58■□□□□ 0.89
SCAMP4-201ENST00000316097 PIBF1Q8WXW3 757 aa20.58■□□□□ 0.89
SCAMP4-201ENST00000316097 MX1P20591 662 aa20.58■□□□□ 0.88
SCAMP4-201ENST00000316097 RILPL2Q969X0 211 aa20.57■□□□□ 0.88
SCAMP4-201ENST00000316097 TTC12Q9H892 705 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-201ENST00000316097 NOLC1Q14978 699 aaKnown RBP eCLIP20.57■□□□□ 0.88
SCAMP4-201ENST00000316097 C17orf53Q8N3J3 647 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-201ENST00000316097 UTYO14607 1347 aa20.57■□□□□ 0.88
SCAMP4-201ENST00000316097 SALL3Q9BXA9 1300 aa20.57■□□□□ 0.88
SCAMP4-201ENST00000316097 TRIM6-TRIM34B2RNG4 842 aa20.56■□□□□ 0.88
SCAMP4-201ENST00000316097 MAP4K4O95819 1239 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms