RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
SPAST-201ENST00000315285 TTF1Q15361 905 aaPredicted RBP15.99■□□□□ 0.15
SPAST-201ENST00000315285 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
SPAST-201ENST00000315285 INSRP06213 1382 aa15.99■□□□□ 0.15
SPAST-201ENST00000315285 NCOA7Q8NI08 942 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 USP5P45974 858 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 COPS6Q7L5N1 327 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 ZNF287Q9HBT7 754 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
SPAST-201ENST00000315285 GOLGA6L10A6NI86 522 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 F13A1P00488 732 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 AKAP4Q5JQC9 854 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 MICU3Q86XE3 530 aa15.98■□□□□ 0.15
SPAST-201ENST00000315285 ZGPATQ8N5A5 531 aaKnown RBP15.98■□□□□ 0.15
SPAST-201ENST00000315285 PDCL3Q9H2J4 239 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 TMEM67Q5HYA8 995 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 TMC6Q7Z403 805 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 TEX13AQ9BXU3 409 aaPredicted RBP15.97■□□□□ 0.15
SPAST-201ENST00000315285 USP26Q9BXU7 913 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 ERLIN2O94905 339 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 RAB11FIP4Q86YS3 637 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 TSPYL1Q9H0U9 437 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 TTC41PQ6P2S7 1318 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
SPAST-201ENST00000315285 LRRC2Q9BYS8 371 aa15.97■□□□□ 0.15
SPAST-201ENST00000315285 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 KIF5CO60282 957 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 PA2G4Q9UQ80 394 aaKnown RBP15.96■□□□□ 0.15
SPAST-201ENST00000315285 METAP2P50579 478 aaKnown RBP eCLIP15.96■□□□□ 0.15
SPAST-201ENST00000315285 RBM5P52756 815 aaKnown RBP eCLIP15.96■□□□□ 0.15
SPAST-201ENST00000315285 CBX1P83916 185 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 ZSCAN29Q8IWY8 852 aaPredicted RBP15.96■□□□□ 0.15
SPAST-201ENST00000315285 CCDC148Q8NFR7 591 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 CCDC102AQ96A19 550 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 PKNOX2Q96KN3 472 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 LINS1Q8NG48 757 aa15.96■□□□□ 0.15
SPAST-201ENST00000315285 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
SPAST-201ENST00000315285 RDXP35241 583 aaKnown RBP15.96■□□□□ 0.14
SPAST-201ENST00000315285 RBM25P49756 843 aaKnown RBP15.96■□□□□ 0.14
SPAST-201ENST00000315285 DNM1Q05193 864 aaKnown RBP15.96■□□□□ 0.14
SPAST-201ENST00000315285 SLC39A6Q13433 755 aa15.96■□□□□ 0.14
SPAST-201ENST00000315285 KLHL34Q8N239 644 aa15.96■□□□□ 0.14
SPAST-201ENST00000315285 ZNF397Q8NF99 534 aaPredicted RBP15.96■□□□□ 0.14
SPAST-201ENST00000315285 SEC63Q9UGP8 760 aaKnown RBP15.96■□□□□ 0.14
SPAST-201ENST00000315285 SOS1Q07889 1333 aaPredicted RBP15.96■□□□□ 0.14
SPAST-201ENST00000315285 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 DZIP1Q86YF9 867 aaKnown RBP15.95■□□□□ 0.14
SPAST-201ENST00000315285 CHMLP26374 656 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 FAM200AQ8TCP9 573 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 EYA1Q99502 592 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 KIF4BQ2VIQ3 1234 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 CATIPQ7Z7H3 387 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 KLF18A0A0U1RQI7 1052 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 CASQ1P31415 396 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 FAM193AP78312 1265 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 MCMDC2Q4G0Z9 681 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 MSH6P52701 1360 aa15.95■□□□□ 0.14
SPAST-201ENST00000315285 AK2P54819 239 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 NMIQ13287 307 aaPredicted RBP15.94■□□□□ 0.14
SPAST-201ENST00000315285 INTS4Q96HW7 963 aaKnown RBP15.94■□□□□ 0.14
SPAST-201ENST00000315285 PRIMPOLQ96LW4 560 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 GBP3Q9H0R5 595 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 TRIM35Q9UPQ4 493 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 SPATA31E1Q6ZUB1 1445 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 LMBR1LQ6UX01 489 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 DACT1Q9NYF0 836 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 CGNQ9P2M7 1197 aaKnown RBP15.94■□□□□ 0.14
SPAST-201ENST00000315285 DYNC1I1O14576 645 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
SPAST-201ENST00000315285 CCDC102BQ68D86 513 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 ZNF830Q96NB3 372 aaPredicted RBP15.94■□□□□ 0.14
SPAST-201ENST00000315285 SAMD9Q5K651 1589 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 MAP3K5Q99683 1374 aa15.94■□□□□ 0.14
SPAST-201ENST00000315285 NLRP5P59047 1200 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 ANO6Q4KMQ2 910 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 CCDC194A0A1B0GVG4 234 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 CPLX3Q8WVH0 158 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 ZKSCAN5Q9Y2L8 839 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 SPA17Q15506 151 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 MFSD6Q6ZSS7 791 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 Q6ZUG5 572 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 NCKAP5LQ9HCH0 1330 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 FKBP15Q5T1M5 1219 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 SLC26A6Q9BXS9 759 aa15.93■□□□□ 0.14
SPAST-201ENST00000315285 ERICH4A6NGS2 130 aa15.92■□□□□ 0.14
SPAST-201ENST00000315285 ISM2Q6H9L7 571 aa15.92■□□□□ 0.14
SPAST-201ENST00000315285 ZPR1O75312 459 aa15.92■□□□□ 0.14
SPAST-201ENST00000315285 MAP3K19Q56UN5 1328 aa15.92■□□□□ 0.14
SPAST-201ENST00000315285 ZNF444Q8N0Y2 327 aaPredicted RBP15.92■□□□□ 0.14
SPAST-201ENST00000315285 ZNF76P36508 570 aa15.92■□□□□ 0.14
SPAST-201ENST00000315285 CWF19L2Q2TBE0 894 aaKnown RBP15.92■□□□□ 0.14
SPAST-201ENST00000315285 CENPHQ9H3R5 247 aa15.92■□□□□ 0.14
SPAST-201ENST00000315285 SNW1Q13573 536 aaKnown RBP15.91■□□□□ 0.14
SPAST-201ENST00000315285 NOLC1Q14978 699 aaKnown RBP eCLIP15.91■□□□□ 0.14
SPAST-201ENST00000315285 TAF4BQ92750 862 aa15.91■□□□□ 0.14
SPAST-201ENST00000315285 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
SPAST-201ENST00000315285 EXOC5O00471 708 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms