RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 SMCR8Q8TEV9 937 aaPredicted RBP10.77□□□□□ -0.68
BDNF-201ENST00000314915 UNC45AQ9H3U1 944 aa10.77□□□□□ -0.68
BDNF-201ENST00000314915 ERBB3P21860 1342 aa10.77□□□□□ -0.68
BDNF-201ENST00000314915 SRGAP3O43295 1099 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 INPP5BP32019 993 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 INCENPQ9NQS7 918 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 RANBP1P43487 201 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 FBXW10Q5XX13 1052 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 FOXR1Q6PIV2 292 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 CEP112Q8N8E3 955 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
BDNF-201ENST00000314915 TEKT1Q969V4 418 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 SHTN1A0MZ66 631 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 VCAM1P19320 739 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 SESN3P58005 492 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 CCDC50Q8IVM0 306 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 TBC1D5Q92609 795 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 YIPF2Q9BWQ6 316 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 VPS18Q9P253 973 aa10.77□□□□□ -0.69
BDNF-201ENST00000314915 DEUP1Q05D60 604 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 CDCA2Q69YH5 1023 aaPredicted RBP10.76□□□□□ -0.69
BDNF-201ENST00000314915 FAM114A1Q8IWE2 563 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 NUP133Q8WUM0 1156 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 SPDL1Q96EA4 605 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 TMX3Q96JJ7 454 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 OSBPL9Q96SU4 736 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 BIN2Q9UBW5 565 aaPredicted RBP10.76□□□□□ -0.69
BDNF-201ENST00000314915 SMARCA4P51532 1647 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 AHCYL1O43865 530 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 MYL1P05976 194 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 NBPF7P0C2Y1 421 aaPredicted RBP10.76□□□□□ -0.69
BDNF-201ENST00000314915 GJA8P48165 433 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 C16orf87Q6PH81 154 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.76□□□□□ -0.69
BDNF-201ENST00000314915 KDRP35968 1356 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 HFM1A2PYH4 1435 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 EBAG9O00559 213 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 OPA1O60313 960 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 CD2BP2O95400 341 aaKnown RBP10.76□□□□□ -0.69
BDNF-201ENST00000314915 MX1P20591 662 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 MYSM1Q5VVJ2 828 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 CC2D1AQ6P1N0 951 aaPredicted RBP10.76□□□□□ -0.69
BDNF-201ENST00000314915 CARD11Q9BXL7 1154 aa10.76□□□□□ -0.69
BDNF-201ENST00000314915 ERLIN1O75477 346 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 RHBDL3P58872 404 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 AMOTL1Q8IY63 956 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 MAB21L3Q8N8X9 362 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 NKTRP30414 1462 aaKnown RBP10.75□□□□□ -0.69
BDNF-201ENST00000314915 ANKRD65E5RJM6 399 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 KIF5CO60282 957 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 SASH1O94885 1247 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 PSMC1P62191 440 aaKnown RBP10.75□□□□□ -0.69
BDNF-201ENST00000314915 RSRC1Q96IZ7 334 aaKnown RBP10.75□□□□□ -0.69
BDNF-201ENST00000314915 CCDC114Q96M63 670 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 TSGA10Q9BZW7 698 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 COG6Q9Y2V7 657 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 PRPF4BQ13523 1007 aaKnown RBP10.75□□□□□ -0.69
BDNF-201ENST00000314915 LRRC23Q53EV4 343 aaPredicted RBP10.75□□□□□ -0.69
BDNF-201ENST00000314915 G3BP2Q9UN86 482 aaKnown RBP10.75□□□□□ -0.69
BDNF-201ENST00000314915 MRFAP1Q9Y605 127 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 PUS10Q3MIT2 529 aaKnown RBP10.75□□□□□ -0.69
BDNF-201ENST00000314915 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 KCND1Q9NSA2 647 aa10.75□□□□□ -0.69
BDNF-201ENST00000314915 KLHL10Q6JEL2 608 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 NAIPQ13075 1403 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 FGD6Q6ZV73 1430 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 EFCAB8A8MWE9 144 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 RAD21O60216 631 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 FESP07332 822 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 SLC30A9Q6PML9 568 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 CCDC80Q76M96 950 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 IQCF2Q8IXL9 164 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 RBM17Q96I25 401 aaKnown RBP10.74□□□□□ -0.69
BDNF-201ENST00000314915 POLR3CQ9BUI4 534 aaPredicted RBP10.74□□□□□ -0.69
BDNF-201ENST00000314915 MMADHCQ9H3L0 296 aaPredicted RBP10.74□□□□□ -0.69
BDNF-201ENST00000314915 IFT88Q13099 833 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 ARHGAP22Q7Z5H3 698 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 KDM2AQ9Y2K7 1162 aa10.74□□□□□ -0.69
BDNF-201ENST00000314915 PARD3Q8TEW0 1356 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 USP47Q96K76 1375 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 E2F6O75461 281 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 ZNF24P17028 368 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 GBP2P32456 591 aaPredicted RBP10.73□□□□□ -0.69
BDNF-201ENST00000314915 GPR161Q8N6U8 529 aaKnown RBP10.73□□□□□ -0.69
BDNF-201ENST00000314915 DTNBP1Q96EV8 351 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 EXOC5O00471 708 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 LRMPQ12912 555 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 TSNAXIP1Q2TAA8 658 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 ISM2Q6H9L7 571 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 SAMD3Q8N6K7 520 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 OR8K1Q8NGG5 319 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 ATP6V0A4Q9HBG4 840 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 SASH3O75995 380 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 INF2Q27J81 1249 aa10.73□□□□□ -0.69
BDNF-201ENST00000314915 G3BP1Q13283 466 aaKnown RBP eCLIP10.72□□□□□ -0.69
BDNF-201ENST00000314915 CCDC93Q567U6 631 aa10.72□□□□□ -0.69
BDNF-201ENST00000314915 TRIM4Q9C037 500 aa10.72□□□□□ -0.69
BDNF-201ENST00000314915 FAM169AQ9Y6X4 670 aa10.72□□□□□ -0.69
BDNF-201ENST00000314915 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms