RNA–Protein interactions for RNA: ENST00000314367.14

CBWD1-201, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-201ENST00000314367 RIC3Q7Z5B4 369 aa21.51■■□□□ 1.03
CBWD1-201ENST00000314367 SYNE4Q8N205 404 aa21.51■■□□□ 1.03
CBWD1-201ENST00000314367 CHMP4AQ9BY43 222 aa21.51■■□□□ 1.03
CBWD1-201ENST00000314367 KLRG2A4D1S0 409 aaPredicted RBP21.51■■□□□ 1.03
CBWD1-201ENST00000314367 PPP1R42Q7Z4L9 355 aa21.51■■□□□ 1.03
CBWD1-201ENST00000314367 UTP14AQ9BVJ6 771 aaKnown RBP21.51■■□□□ 1.03
CBWD1-201ENST00000314367 ARHGAP27Q6ZUM4 889 aa21.5■■□□□ 1.03
CBWD1-201ENST00000314367 ISCA1Q9BUE6 129 aa21.5■■□□□ 1.03
CBWD1-201ENST00000314367 PDZRN3Q9UPQ7 1066 aa21.5■■□□□ 1.03
CBWD1-201ENST00000314367 SLFN5Q08AF3 891 aa21.49■■□□□ 1.03
CBWD1-201ENST00000314367 E9PSI1 815 aa21.48■■□□□ 1.03
CBWD1-201ENST00000314367 C3orf67Q6ZVT6 689 aa21.48■■□□□ 1.03
CBWD1-201ENST00000314367 MASTLQ96GX5 879 aa21.48■■□□□ 1.03
CBWD1-201ENST00000314367 ZNF219Q9P2Y4 722 aaPredicted RBP21.48■■□□□ 1.03
CBWD1-201ENST00000314367 TRMT112Q9UI30 125 aaKnown RBP21.48■■□□□ 1.03
CBWD1-201ENST00000314367 PI4KAP2A4QPH2 592 aa21.47■■□□□ 1.03
CBWD1-201ENST00000314367 STYK1Q6J9G0 422 aa21.47■■□□□ 1.03
CBWD1-201ENST00000314367 PI4KAP1Q8N8J0 262 aa21.47■■□□□ 1.03
CBWD1-201ENST00000314367 MYD88Q99836 296 aa21.47■■□□□ 1.03
CBWD1-201ENST00000314367 MAP3K2Q9Y2U5 619 aa21.47■■□□□ 1.03
CBWD1-201ENST00000314367 ADCY9O60503 1353 aa21.47■■□□□ 1.03
CBWD1-201ENST00000314367 LAMB2P55268 1798 aa21.46■■□□□ 1.03
CBWD1-201ENST00000314367 DDX58O95786 925 aaKnown RBP21.46■■□□□ 1.03
CBWD1-201ENST00000314367 NPR1P16066 1061 aa21.46■■□□□ 1.03
CBWD1-201ENST00000314367 FLIIQ13045 1269 aa21.46■■□□□ 1.03
CBWD1-201ENST00000314367 CRY2Q49AN0 593 aa21.46■■□□□ 1.03
CBWD1-201ENST00000314367 PRPF40BQ6NWY9 871 aaKnown RBP21.46■■□□□ 1.03
CBWD1-201ENST00000314367 RIC1Q4ADV7 1423 aa21.45■■□□□ 1.02
CBWD1-201ENST00000314367 SBF1O95248 1867 aa21.45■■□□□ 1.02
CBWD1-201ENST00000314367 C21orf2O43822 256 aa21.45■■□□□ 1.02
CBWD1-201ENST00000314367 HCLS1P14317 486 aaPredicted RBP21.45■■□□□ 1.02
CBWD1-201ENST00000314367 RTL5Q5HYW3 569 aaPredicted RBP21.45■■□□□ 1.02
CBWD1-201ENST00000314367 KSR2Q6VAB6 950 aa21.45■■□□□ 1.02
CBWD1-201ENST00000314367 CNKSR1Q969H4 720 aa21.45■■□□□ 1.02
CBWD1-201ENST00000314367 METTL22Q9BUU2 404 aaPredicted RBP21.45■■□□□ 1.02
CBWD1-201ENST00000314367 FAM89AQ96GI7 184 aa21.44■■□□□ 1.02
CBWD1-201ENST00000314367 DDX60Q8IY21 1712 aaKnown RBP21.44■■□□□ 1.02
CBWD1-201ENST00000314367 RASSF7Q02833 373 aa21.43■■□□□ 1.02
CBWD1-201ENST00000314367 TRIM28Q13263 835 aaKnown RBP21.43■■□□□ 1.02
CBWD1-201ENST00000314367 SLC10A5Q5PT55 438 aa21.43■■□□□ 1.02
CBWD1-201ENST00000314367 SH3TC1Q8TE82 1336 aa21.43■■□□□ 1.02
CBWD1-201ENST00000314367 CCDC88AQ3V6T2 1871 aa21.43■■□□□ 1.02
CBWD1-201ENST00000314367 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
CBWD1-201ENST00000314367 FKBP5Q13451 457 aaPredicted RBP21.42■■□□□ 1.02
CBWD1-201ENST00000314367 TRMT2AQ8IZ69 625 aaKnown RBP21.42■■□□□ 1.02
CBWD1-201ENST00000314367 TAF1P21675 1872 aa21.42■■□□□ 1.02
CBWD1-201ENST00000314367 FER1L6Q2WGJ9 1857 aa21.42■■□□□ 1.02
CBWD1-201ENST00000314367 IGKV5-2P06315 115 aa21.41■■□□□ 1.02
CBWD1-201ENST00000314367 HNRNPUQ00839 825 aaKnown RBP eCLIP21.41■■□□□ 1.02
CBWD1-201ENST00000314367 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
CBWD1-201ENST00000314367 ZNF784Q8NCA9 323 aaPredicted RBP21.41■■□□□ 1.02
CBWD1-201ENST00000314367 NLRP3Q96P20 1036 aa21.41■■□□□ 1.02
CBWD1-201ENST00000314367 SLC51AQ86UW1 340 aa21.41■■□□□ 1.02
CBWD1-201ENST00000314367 JARID2Q92833 1246 aaPredicted RBP21.41■■□□□ 1.02
CBWD1-201ENST00000314367 RPGRQ92834 1020 aaKnown RBP21.41■■□□□ 1.02
CBWD1-201ENST00000314367 NFKBIEO00221 500 aa21.4■■□□□ 1.02
CBWD1-201ENST00000314367 PRELPP51888 382 aa21.4■■□□□ 1.02
CBWD1-201ENST00000314367 CWF19L2Q2TBE0 894 aaKnown RBP21.4■■□□□ 1.02
CBWD1-201ENST00000314367 C7orf43Q8WVR3 580 aa21.4■■□□□ 1.02
CBWD1-201ENST00000314367 CCDC191Q8NCU4 936 aa21.39■■□□□ 1.01
CBWD1-201ENST00000314367 ALDH1B1P30837 517 aa21.38■■□□□ 1.01
CBWD1-201ENST00000314367 HOXA10P31260 410 aaPredicted RBP21.38■■□□□ 1.01
CBWD1-201ENST00000314367 CWC25Q9NXE8 425 aaPredicted RBP21.38■■□□□ 1.01
CBWD1-201ENST00000314367 F6X3S4 739 aa21.38■■□□□ 1.01
CBWD1-201ENST00000314367 C9orf131Q5VYM1 1079 aa21.38■■□□□ 1.01
CBWD1-201ENST00000314367 ZBTB38Q8NAP3 1195 aaPredicted RBP21.37■■□□□ 1.01
CBWD1-201ENST00000314367 DNAAF4Q8WXU2 420 aa21.37■■□□□ 1.01
CBWD1-201ENST00000314367 IRS4O14654 1257 aaPredicted RBP21.36■■□□□ 1.01
CBWD1-201ENST00000314367 NEXNQ0ZGT2 675 aa21.36■■□□□ 1.01
CBWD1-201ENST00000314367 RBM17Q96I25 401 aaKnown RBP21.36■■□□□ 1.01
CBWD1-201ENST00000314367 BCL2L13Q9BXK5 485 aa21.36■■□□□ 1.01
CBWD1-201ENST00000314367 RNF181Q9P0P0 153 aa21.36■■□□□ 1.01
CBWD1-201ENST00000314367 NEURL1BA8MQ27 555 aa21.36■■□□□ 1.01
CBWD1-201ENST00000314367 SSH1Q8WYL5 1049 aa21.36■■□□□ 1.01
CBWD1-201ENST00000314367 CRAMP1Q96RY5 1269 aa21.36■■□□□ 1.01
CBWD1-201ENST00000314367 ABCC4O15439 1325 aa21.35■■□□□ 1.01
CBWD1-201ENST00000314367 PCCAP05165 728 aaPredicted RBP21.35■■□□□ 1.01
CBWD1-201ENST00000314367 MRPL50Q8N5N7 158 aaKnown RBP21.35■■□□□ 1.01
CBWD1-201ENST00000314367 COL4A1P02462 1669 aa21.34■■□□□ 1.01
CBWD1-201ENST00000314367 ZNF526Q8TF50 670 aaPredicted RBP21.33■■□□□ 1.01
CBWD1-201ENST00000314367 CCDC93Q567U6 631 aa21.33■■□□□ 1
CBWD1-201ENST00000314367 TAOK3Q9H2K8 898 aa21.33■■□□□ 1
CBWD1-201ENST00000314367 PPEF1O14829 653 aaPredicted RBP21.32■■□□□ 1
CBWD1-201ENST00000314367 LMNB1P20700 586 aa21.32■■□□□ 1
CBWD1-201ENST00000314367 DICER1Q9UPY3 1922 aaKnown RBP21.31■■□□□ 1
CBWD1-201ENST00000314367 SOGA3Q5TF21 947 aa21.31■■□□□ 1
CBWD1-201ENST00000314367 LINS1Q8NG48 757 aa21.31■■□□□ 1
CBWD1-201ENST00000314367 SNED1Q8TER0 1413 aa21.31■■□□□ 1
CBWD1-201ENST00000314367 GCKRQ14397 625 aa21.31■■□□□ 1
CBWD1-201ENST00000314367 SF3B3Q15393 1217 aaKnown RBP21.31■■□□□ 1
CBWD1-201ENST00000314367 DDX46Q7L014 1031 aaKnown RBP21.31■■□□□ 1
CBWD1-201ENST00000314367 MYH3P11055 1940 aa21.3■■□□□ 1
CBWD1-201ENST00000314367 TIAM2Q8IVF5 1701 aa21.3■■□□□ 1
CBWD1-201ENST00000314367 BEND3Q5T5X7 828 aa21.3■■□□□ 1
CBWD1-201ENST00000314367 UBE3BQ7Z3V4 1068 aa21.3■■□□□ 1
CBWD1-201ENST00000314367 CCDC85AQ96PX6 553 aaPredicted RBP21.3■■□□□ 1
CBWD1-201ENST00000314367 LTBP3Q9NS15 1303 aa21.29■■□□□ 1
CBWD1-201ENST00000314367 H7C1W4 665 aa21.28■■□□□ 1
CBWD1-201ENST00000314367 GRAPQ13588 217 aa21.28■■□□□ 1
CBWD1-201ENST00000314367 SLC4A10Q6U841 1118 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms