RNA–Protein interactions for RNA: ENST00000311330.3

CD248-201, Transcript of CD248 molecule, humanhuman

APPRIS P1 BASIC

Gene CD248, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD248-201ENST00000311330 ERVV-2B6SEH9 535 aa22.25■■□□□ 1.15
CD248-201ENST00000311330 PTPN12Q05209 780 aaKnown RBP22.25■■□□□ 1.15
CD248-201ENST00000311330 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.25■■□□□ 1.15
CD248-201ENST00000311330 DDX49Q9Y6V7 483 aaKnown RBP22.25■■□□□ 1.15
CD248-201ENST00000311330 PARP4Q9UKK3 1724 aaKnown RBP22.25■■□□□ 1.15
CD248-201ENST00000311330 EPB41L2O43491 1005 aaKnown RBP22.25■■□□□ 1.15
CD248-201ENST00000311330 RUFY2Q8WXA3 655 aa22.25■■□□□ 1.15
CD248-201ENST00000311330 AFDNP55196 1824 aaKnown RBP22.25■■□□□ 1.15
CD248-201ENST00000311330 TFCP2Q12800 502 aa22.24■■□□□ 1.15
CD248-201ENST00000311330 GAS2L3Q86XJ1 694 aa22.24■■□□□ 1.15
CD248-201ENST00000311330 EDC3Q96F86 508 aaKnown RBP22.24■■□□□ 1.15
CD248-201ENST00000311330 ZBTB3Q9H5J0 574 aa22.24■■□□□ 1.15
CD248-201ENST00000311330 ARFGEF2Q9Y6D5 1785 aa22.24■■□□□ 1.15
CD248-201ENST00000311330 PTMSP20962 102 aa22.24■■□□□ 1.15
CD248-201ENST00000311330 NMIQ13287 307 aaPredicted RBP22.24■■□□□ 1.15
CD248-201ENST00000311330 COPRSQ9NQ92 184 aa22.24■■□□□ 1.15
CD248-201ENST00000311330 CASP7P55210 303 aa22.23■■□□□ 1.15
CD248-201ENST00000311330 PRPF40BQ6NWY9 871 aaKnown RBP22.23■■□□□ 1.15
CD248-201ENST00000311330 NKX1-1Q15270 411 aaPredicted RBP22.23■■□□□ 1.15
CD248-201ENST00000311330 LMBR1LQ6UX01 489 aa22.23■■□□□ 1.15
CD248-201ENST00000311330 CHMP3Q9Y3E7 222 aa22.23■■□□□ 1.15
CD248-201ENST00000311330 NDUFB9Q9Y6M9 179 aa22.23■■□□□ 1.15
CD248-201ENST00000311330 LMBRD1Q9NUN5 540 aa22.22■■□□□ 1.15
CD248-201ENST00000311330 NCLP19338 710 aaKnown RBP22.22■■□□□ 1.15
CD248-201ENST00000311330 RABL6Q3YEC7 729 aaPredicted RBP22.22■■□□□ 1.15
CD248-201ENST00000311330 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
CD248-201ENST00000311330 PRPF40AO75400 957 aaKnown RBP22.21■■□□□ 1.15
CD248-201ENST00000311330 FSD1Q9BTV5 496 aa22.21■■□□□ 1.15
CD248-201ENST00000311330 DBNLQ9UJU6 430 aaKnown RBP22.21■■□□□ 1.15
CD248-201ENST00000311330 AK2P54819 239 aa22.21■■□□□ 1.15
CD248-201ENST00000311330 ADCK5Q3MIX3 580 aa22.21■■□□□ 1.15
CD248-201ENST00000311330 TTC14Q96N46 770 aa22.21■■□□□ 1.15
CD248-201ENST00000311330 ZNF330Q9Y3S2 320 aaPredicted RBP22.21■■□□□ 1.15
CD248-201ENST00000311330 A0A0D9SFI3 127 aa22.2■■□□□ 1.14
CD248-201ENST00000311330 CASTP20810 708 aaKnown RBP22.2■■□□□ 1.14
CD248-201ENST00000311330 LAMB4A4D0S4 1761 aa22.2■■□□□ 1.14
CD248-201ENST00000311330 TNNI3KQ59H18 835 aa22.2■■□□□ 1.14
CD248-201ENST00000311330 FPGT-TNNI3KV9GXZ4 949 aa22.2■■□□□ 1.14
CD248-201ENST00000311330 KCPQ6ZWJ8 1503 aa22.2■■□□□ 1.14
CD248-201ENST00000311330 DTNBO60941 627 aa22.19■■□□□ 1.14
CD248-201ENST00000311330 FOXO4P98177 505 aa22.19■■□□□ 1.14
CD248-201ENST00000311330 KLHL40Q2TBA0 621 aa22.19■■□□□ 1.14
CD248-201ENST00000311330 INTS4Q96HW7 963 aaKnown RBP22.19■■□□□ 1.14
CD248-201ENST00000311330 GRPEL1Q9HAV7 217 aa22.19■■□□□ 1.14
CD248-201ENST00000311330 ABCA3Q99758 1704 aa22.19■■□□□ 1.14
CD248-201ENST00000311330 RUFY3Q7L099 469 aa22.19■■□□□ 1.14
CD248-201ENST00000311330 CCDC171Q6TFL3 1326 aa22.18■■□□□ 1.14
CD248-201ENST00000311330 H7C1W4 665 aa22.18■■□□□ 1.14
CD248-201ENST00000311330 FOXD4L6Q3SYB3 417 aaPredicted RBP22.18■■□□□ 1.14
CD248-201ENST00000311330 FOXD4L3Q6VB84 417 aaPredicted RBP22.18■■□□□ 1.14
CD248-201ENST00000311330 JAKMIP1Q96N16 626 aaKnown RBP22.18■■□□□ 1.14
CD248-201ENST00000311330 ERBB4Q15303 1308 aa22.18■■□□□ 1.14
CD248-201ENST00000311330 CWC25Q9NXE8 425 aaPredicted RBP22.18■■□□□ 1.14
CD248-201ENST00000311330 BRD1O95696 1058 aa22.17■■□□□ 1.14
CD248-201ENST00000311330 MRE11P49959 708 aa22.17■■□□□ 1.14
CD248-201ENST00000311330 DBNDD2Q9BQY9 259 aa22.17■■□□□ 1.14
CD248-201ENST00000311330 BTG4Q9NY30 223 aa22.17■■□□□ 1.14
CD248-201ENST00000311330 RBM8AQ9Y5S9 174 aaKnown RBP22.17■■□□□ 1.14
CD248-201ENST00000311330 CHGBP05060 677 aa22.17■■□□□ 1.14
CD248-201ENST00000311330 KCNJ4P48050 445 aa22.17■■□□□ 1.14
CD248-201ENST00000311330 TMOD3Q9NYL9 352 aa22.17■■□□□ 1.14
CD248-201ENST00000311330 SHANK3Q9BYB0 1731 aa22.16■■□□□ 1.14
CD248-201ENST00000311330 COL9A3Q14050 684 aaPredicted RBP22.16■■□□□ 1.14
CD248-201ENST00000311330 ASAP1Q9ULH1 1129 aa22.16■■□□□ 1.14
CD248-201ENST00000311330 NECTIN1Q15223 517 aa22.16■■□□□ 1.14
CD248-201ENST00000311330 CAVIN1Q6NZI2 390 aaKnown RBP22.16■■□□□ 1.14
CD248-201ENST00000311330 UBR2Q8IWV8 1755 aa22.15■■□□□ 1.14
CD248-201ENST00000311330 LARGE1O95461 756 aa22.15■■□□□ 1.14
CD248-201ENST00000311330 CREB3L3Q68CJ9 461 aa22.14■■□□□ 1.14
CD248-201ENST00000311330 ZNF589Q86UQ0 364 aaPredicted RBP22.14■■□□□ 1.14
CD248-201ENST00000311330 ZNF594Q96JF6 807 aaPredicted RBP22.14■■□□□ 1.14
CD248-201ENST00000311330 DNAJC2Q99543 621 aaKnown RBP22.14■■□□□ 1.14
CD248-201ENST00000311330 LIMCH1Q9UPQ0 1083 aa22.14■■□□□ 1.14
CD248-201ENST00000311330 HIP1O00291 1037 aa22.14■■□□□ 1.13
CD248-201ENST00000311330 GPT2Q8TD30 523 aa22.14■■□□□ 1.13
CD248-201ENST00000311330 COL15A1P39059 1388 aa22.13■■□□□ 1.13
CD248-201ENST00000311330 ATP5JP18859 108 aa22.13■■□□□ 1.13
CD248-201ENST00000311330 PIGBQ92521 554 aa22.13■■□□□ 1.13
CD248-201ENST00000311330 MAP4K1Q92918 833 aa22.13■■□□□ 1.13
CD248-201ENST00000311330 PDRG1Q9NUG6 133 aa22.13■■□□□ 1.13
CD248-201ENST00000311330 TAF6LQ9Y6J9 622 aa22.13■■□□□ 1.13
CD248-201ENST00000311330 DNAJC10Q8IXB1 793 aa22.13■■□□□ 1.13
CD248-201ENST00000311330 RBM27Q9P2N5 1060 aaKnown RBP22.13■■□□□ 1.13
CD248-201ENST00000311330 NSFL1CQ9UNZ2 370 aaKnown RBP22.12■■□□□ 1.13
CD248-201ENST00000311330 ATG9AQ7Z3C6 839 aa22.12■■□□□ 1.13
CD248-201ENST00000311330 KCNB2Q92953 911 aa22.12■■□□□ 1.13
CD248-201ENST00000311330 NEUROD6Q96NK8 337 aa22.12■■□□□ 1.13
CD248-201ENST00000311330 TNS2Q63HR2 1409 aa22.12■■□□□ 1.13
CD248-201ENST00000311330 ZSWIM6Q9HCJ5 1215 aa22.11■■□□□ 1.13
CD248-201ENST00000311330 CYP46A1Q9Y6A2 500 aa22.11■■□□□ 1.13
CD248-201ENST00000311330 TOGARAM1Q9Y4F4 1720 aa22.11■■□□□ 1.13
CD248-201ENST00000311330 SLC27A2O14975 620 aa22.11■■□□□ 1.13
CD248-201ENST00000311330 PAPPAQ13219 1627 aa22.11■■□□□ 1.13
CD248-201ENST00000311330 NUP188Q5SRE5 1749 aa22.11■■□□□ 1.13
CD248-201ENST00000311330 ZKSCAN1P17029 563 aaPredicted RBP22.1■■□□□ 1.13
CD248-201ENST00000311330 TIMM10P62072 90 aa22.1■■□□□ 1.13
CD248-201ENST00000311330 LRRC24Q50LG9 513 aa22.1■■□□□ 1.13
CD248-201ENST00000311330 CCDC191Q8NCU4 936 aa22.1■■□□□ 1.13
CD248-201ENST00000311330 DDX46Q7L014 1031 aaKnown RBP22.1■■□□□ 1.13
CD248-201ENST00000311330 TCEANC2Q96MN5 208 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms