RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 IFIT3O14879 490 aaKnown RBP15.14■□□□□ 0.01
SNED1-201ENST00000310397 BMP15O95972 392 aa15.14■□□□□ 0.01
SNED1-201ENST00000310397 GOLIM4O00461 696 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 TYRO3Q06418 890 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 CEP112Q8N8E3 955 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 TTC12Q9H892 705 aaPredicted RBP15.13■□□□□ 0.01
SNED1-201ENST00000310397 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
SNED1-201ENST00000310397 RNF187Q5TA31 235 aaPredicted RBP15.13■□□□□ 0.01
SNED1-201ENST00000310397 ORC3Q9UBD5 711 aaPredicted RBP15.13■□□□□ 0.01
SNED1-201ENST00000310397 ADGRF5Q8IZF2 1346 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 HLTFQ14527 1009 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNED1-201ENST00000310397 CCDC178Q5BJE1 867 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 SPECC1LQ69YQ0 1117 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 USP16Q9Y5T5 823 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 ABCF2Q9UG63 623 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 CTAGE9A4FU28 777 aa15.13■□□□□ 0.01
SNED1-201ENST00000310397 ZNF830Q96NB3 372 aaPredicted RBP15.13■□□□□ 0.01
SNED1-201ENST00000310397 NOS1P29475 1434 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 GIGYF2Q6Y7W6 1299 aaKnown RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 JADE2Q9NQC1 790 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 RMND1Q9NWS8 449 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 IFI16Q16666 785 aaKnown RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 CNKSR2Q8WXI2 1034 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 CCDC113Q9H0I3 377 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 TCP11L1Q9NUJ3 509 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 GOLGA8AA7E2F4 631 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 MINDY4BA8MYZ0 360 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 SMAP1Q8IYB5 467 aaPredicted RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 LARP6Q9BRS8 491 aaKnown RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 KDM5AP29375 1690 aaKnown RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 DACT1Q9NYF0 836 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 TDRD12Q587J7 1177 aaKnown RBP15.12■□□□□ 0.01
SNED1-201ENST00000310397 CPLX3Q8WVH0 158 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 MYD88Q99836 296 aa15.12■□□□□ 0.01
SNED1-201ENST00000310397 HSF2BPO75031 334 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 PROSER2Q86WR7 435 aaPredicted RBP15.11■□□□□ 0.01
SNED1-201ENST00000310397 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
SNED1-201ENST00000310397 METAP2P50579 478 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNED1-201ENST00000310397 MRPS27Q92552 414 aaKnown RBP15.11■□□□□ 0.01
SNED1-201ENST00000310397 CAVIN4Q5BKX8 364 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 GOLGA1Q92805 767 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 EMILIN1Q9Y6C2 1016 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 V9GYY5 206 aaPredicted RBP15.11■□□□□ 0.01
SNED1-201ENST00000310397 ATL3Q6DD88 541 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 NME9Q86XW9 330 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 RHPN1Q8TCX5 695 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 DNAI1Q9UI46 699 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
SNED1-201ENST00000310397 ZNF76P36508 570 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 MNAT1P51948 309 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 SPAG1Q07617 926 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 OGFRQ9NZT2 677 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 CCDC194A0A1B0GVG4 234 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
SNED1-201ENST00000310397 DCTPP1Q9H773 170 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 KIF5BP33176 963 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 WAPLQ7Z5K2 1190 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 BCCIPQ9P287 314 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNED1-201ENST00000310397 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
SNED1-201ENST00000310397 INSRP06213 1382 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 ZNF652Q9Y2D9 606 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 CYLC1P35663 651 aaPredicted RBP15.1■□□□□ 0.01
SNED1-201ENST00000310397 DNM1Q05193 864 aaKnown RBP15.1■□□□□ 0.01
SNED1-201ENST00000310397 BBXQ8WY36 941 aaPredicted RBP15.1■□□□□ 0.01
SNED1-201ENST00000310397 TRIM21P19474 475 aaKnown RBP15.1■□□□□ 0.01
SNED1-201ENST00000310397 TMEM67Q5HYA8 995 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 MKNK2Q9HBH9 465 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 MAP3K2Q9Y2U5 619 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 N4BP3O15049 544 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 SYT1P21579 422 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 CALML4Q96GE6 196 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 GOPCQ9HD26 462 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 ZBTB40Q9NUA8 1239 aa15.1■□□□□ 0.01
SNED1-201ENST00000310397 GSTTP1A0A1W2PQM5 241 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 CTAGE15A4D2H0 777 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 ZFYP08048 801 aaPredicted RBP15.09■□□□□ 0.01
SNED1-201ENST00000310397 CTAGE8P0CG41 777 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 CTAGE6Q86UF2 777 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 CTAGE4Q8IX94 777 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNED1-201ENST00000310397 MCM6Q14566 821 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 TRERF1Q96PN7 1200 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 SLC5A1P13866 664 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 TTC41PQ6P2S7 1318 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 UBA7P41226 1012 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 CETN1Q12798 172 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 MEIS3Q99687 375 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 NLRP5P59047 1200 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 BICRAQ9NZM4 1560 aa15.09■□□□□ 0.01
SNED1-201ENST00000310397 POGZQ7Z3K3 1410 aa15.08■□□□□ 0.01
SNED1-201ENST00000310397 TCOF1Q13428 1488 aaKnown RBP15.08■□□□□ 0.01
SNED1-201ENST00000310397 PIBF1Q8WXW3 757 aa15.08■□□□□ 0
SNED1-201ENST00000310397 KDM5BQ9UGL1 1544 aa15.08■□□□□ 0
SNED1-201ENST00000310397 TMTC2Q8N394 836 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms