RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CNNM1Q9NRU3 951 aa7.19□□□□□ -1.26
SEC22A-201ENST00000309934 DDX11L8A8MPP1 907 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 MPHOSPH8Q99549 860 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 USP21Q9UK80 565 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 PTCD1O75127 700 aaKnown RBP7.18□□□□□ -1.26
SEC22A-201ENST00000309934 IFIT1P09914 478 aaKnown RBP7.18□□□□□ -1.26
SEC22A-201ENST00000309934 TTC39AQ5SRH9 613 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 CPLX2Q6PUV4 134 aaKnown RBP7.18□□□□□ -1.26
SEC22A-201ENST00000309934 GPR108Q9NPR9 543 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 CCDC87Q9NVE4 849 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 RLBP1P12271 317 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 MTERF4Q7Z6M4 381 aaKnown RBP7.18□□□□□ -1.26
SEC22A-201ENST00000309934 AACSQ86V21 672 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 RHPN1Q8TCX5 695 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 SSH3Q8TE77 659 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 ZNF622Q969S3 477 aaKnown RBP eCLIP7.18□□□□□ -1.26
SEC22A-201ENST00000309934 ZSCAN31Q96LW9 406 aaPredicted RBP7.18□□□□□ -1.26
SEC22A-201ENST00000309934 C8orf37Q96NL8 207 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 MEIS3Q99687 375 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 FSD1Q9BTV5 496 aa7.18□□□□□ -1.26
SEC22A-201ENST00000309934 COL14A1Q05707 1796 aaKnown RBP7.18□□□□□ -1.26
SEC22A-201ENST00000309934 F6X3S4 739 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 SLC5A1P13866 664 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 ATP6V1AP38606 617 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 SYAP1Q96A49 352 aaPredicted RBP7.17□□□□□ -1.26
SEC22A-201ENST00000309934 C1orf115Q9H7X2 142 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 CHMP5Q9NZZ3 219 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 LMO7Q8WWI1 1683 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 VPS37DQ86XT2 251 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 ZNF496Q96IT1 587 aaPredicted RBP7.17□□□□□ -1.26
SEC22A-201ENST00000309934 UTP14AQ9BVJ6 771 aaKnown RBP7.17□□□□□ -1.26
SEC22A-201ENST00000309934 AHDC1Q5TGY3 1603 aaPredicted RBP7.17□□□□□ -1.26
SEC22A-201ENST00000309934 PARP4Q9UKK3 1724 aaKnown RBP7.17□□□□□ -1.26
SEC22A-201ENST00000309934 COL5A2P05997 1499 aaPredicted RBP7.17□□□□□ -1.26
SEC22A-201ENST00000309934 IGHDP01880 384 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 TRDNQ13061 729 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 BEND3Q5T5X7 828 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 HMG20BQ9P0W2 317 aa7.17□□□□□ -1.26
SEC22A-201ENST00000309934 TRMT112Q9UI30 125 aaKnown RBP7.17□□□□□ -1.26
SEC22A-201ENST00000309934 MTX1Q13505 466 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 CERS3Q8IU89 383 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 SLC3A2P08195 630 aaKnown RBP7.16□□□□□ -1.26
SEC22A-201ENST00000309934 GCKRQ14397 625 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 DZIP3Q86Y13 1208 aaKnown RBP7.16□□□□□ -1.26
SEC22A-201ENST00000309934 ANO2Q9NQ90 1003 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.16□□□□□ -1.26
SEC22A-201ENST00000309934 G3V3G9 751 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 TCIRG1Q13488 830 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 DCAF8Q5TAQ9 597 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 OSBPL3Q9H4L5 887 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 CGNQ9P2M7 1197 aaKnown RBP7.16□□□□□ -1.26
SEC22A-201ENST00000309934 FRAT2O75474 233 aaPredicted RBP7.16□□□□□ -1.26
SEC22A-201ENST00000309934 CIAO1O76071 339 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 PCCAP05165 728 aaPredicted RBP7.16□□□□□ -1.26
SEC22A-201ENST00000309934 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 NEUROD6Q96NK8 337 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 NACAP1Q9BZK3 213 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 ANKRD2Q9GZV1 360 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 AXIN2Q9Y2T1 843 aa7.16□□□□□ -1.26
SEC22A-201ENST00000309934 RTCBQ9Y3I0 505 aaKnown RBP7.16□□□□□ -1.26
SEC22A-201ENST00000309934 LTN1O94822 1766 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 SPATA31A1Q5TZJ5 1347 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 NT5C2P49902 561 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 TRIM28Q13263 835 aaKnown RBP7.15□□□□□ -1.26
SEC22A-201ENST00000309934 SLC39A6Q13433 755 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 SYNE3Q6ZMZ3 975 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 FAM196AQ6ZSG2 479 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 PPP1R1BQ9UD71 204 aaPredicted RBP7.15□□□□□ -1.26
SEC22A-201ENST00000309934 MAP3K15Q6ZN16 1313 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 NEURL1BA8MQ27 555 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 PDE8AO60658 829 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 ADRA2BP18089 450 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 PDCP20941 246 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 PDE1AP54750 535 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 ST5P78524 1137 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 CLEC4GQ6UXB4 293 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 DDX17Q92841 729 aaKnown RBP7.15□□□□□ -1.26
SEC22A-201ENST00000309934 CCDC34Q96HJ3 373 aa7.15□□□□□ -1.26
SEC22A-201ENST00000309934 U3KPZ7 1027 aaPredicted RBP7.15□□□□□ -1.26
SEC22A-201ENST00000309934 TNS2Q63HR2 1409 aa7.15□□□□□ -1.27
SEC22A-201ENST00000309934 CYP27B1O15528 508 aa7.15□□□□□ -1.27
SEC22A-201ENST00000309934 DHX16O60231 1041 aaKnown RBP7.15□□□□□ -1.27
SEC22A-201ENST00000309934 SSR1P43307 286 aaKnown RBP7.15□□□□□ -1.27
SEC22A-201ENST00000309934 CAVIN4Q5BKX8 364 aa7.15□□□□□ -1.27
SEC22A-201ENST00000309934 TMC4Q7Z404 712 aa7.15□□□□□ -1.27
SEC22A-201ENST00000309934 ZGPATQ8N5A5 531 aaKnown RBP7.15□□□□□ -1.27
SEC22A-201ENST00000309934 RGPD1P0DJD0 1748 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 SPATA31A5Q5VU36 1347 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 SPATA31A7Q8IWB4 1347 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 METTL24Q5JXM2 366 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 SPTY2D1Q68D10 685 aaPredicted RBP7.14□□□□□ -1.27
SEC22A-201ENST00000309934 TPTE2Q6XPS3 522 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 UBE3BQ7Z3V4 1068 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 COL15A1P39059 1388 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 RFX7Q2KHR2 1363 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 SH3TC1Q8TE82 1336 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 CDHR2Q9BYE9 1310 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 GOLGA6L3A6NEY3 463 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 STAP2Q9UGK3 403 aa7.14□□□□□ -1.27
SEC22A-201ENST00000309934 EXOC6BQ9Y2D4 811 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms