RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 BECN2A8MW95 431 aa17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 SPTLC3Q9NUV7 552 aa17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 NRXN3Q9Y4C0 1643 aa17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 IL17REQ8NFR9 667 aa17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 SSH3Q8TE77 659 aa17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 GPATCH3Q96I76 525 aa17.05■□□□□ 0.32
SCUBE2-201ENST00000309263 BLOC1S2Q6QNY1 142 aa17.04■□□□□ 0.32
SCUBE2-201ENST00000309263 MRVI1Q9Y6F6 885 aa17.04■□□□□ 0.32
SCUBE2-201ENST00000309263 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
SCUBE2-201ENST00000309263 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
SCUBE2-201ENST00000309263 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
SCUBE2-201ENST00000309263 ARID5BQ14865 1188 aa17.04■□□□□ 0.32
SCUBE2-201ENST00000309263 NDUFB9Q9Y6M9 179 aa17.04■□□□□ 0.32
SCUBE2-201ENST00000309263 TPM3P06753 285 aa17.03■□□□□ 0.32
SCUBE2-201ENST00000309263 NR1I2O75469 434 aa17.03■□□□□ 0.32
SCUBE2-201ENST00000309263 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
SCUBE2-201ENST00000309263 FMNL2Q96PY5 1086 aa17.03■□□□□ 0.32
SCUBE2-201ENST00000309263 CRB1P82279 1406 aa17.02■□□□□ 0.32
SCUBE2-201ENST00000309263 ERICH4A6NGS2 130 aa17.02■□□□□ 0.32
SCUBE2-201ENST00000309263 KCNQ3O43525 872 aa17.02■□□□□ 0.32
SCUBE2-201ENST00000309263 CWF19L2Q2TBE0 894 aaKnown RBP17.02■□□□□ 0.32
SCUBE2-201ENST00000309263 CREB3L3Q68CJ9 461 aa17.02■□□□□ 0.32
SCUBE2-201ENST00000309263 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.32
SCUBE2-201ENST00000309263 ECHDC1Q9NTX5 307 aa17.02■□□□□ 0.32
SCUBE2-201ENST00000309263 KCNA6P17658 529 aa17.02■□□□□ 0.31
SCUBE2-201ENST00000309263 KLHDC4Q8TBB5 520 aa17.02■□□□□ 0.31
SCUBE2-201ENST00000309263 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.31
SCUBE2-201ENST00000309263 KIF20BQ96Q89 1820 aa17.02■□□□□ 0.31
SCUBE2-201ENST00000309263 SSH2Q76I76 1423 aa17.02■□□□□ 0.31
SCUBE2-201ENST00000309263 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 SH2B1Q9NRF2 756 aaPredicted RBP17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 JAK2O60674 1132 aa17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 TEFQ10587 303 aa17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 FUCA2Q9BTY2 467 aa17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 ROBO2Q9HCK4 1378 aa17.01■□□□□ 0.31
SCUBE2-201ENST00000309263 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
SCUBE2-201ENST00000309263 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
SCUBE2-201ENST00000309263 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
SCUBE2-201ENST00000309263 USP16Q9Y5T5 823 aa17■□□□□ 0.31
SCUBE2-201ENST00000309263 CACTINQ8WUQ7 758 aaKnown RBP17■□□□□ 0.31
SCUBE2-201ENST00000309263 SIRT1Q96EB6 747 aa17■□□□□ 0.31
SCUBE2-201ENST00000309263 PDCP20941 246 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 HSP90AB4PQ58FF6 505 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 GTPBP4Q9BZE4 634 aaKnown RBP16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 CCDC171Q6TFL3 1326 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 CDC42BPGQ6DT37 1551 aa16.99■□□□□ 0.31
SCUBE2-201ENST00000309263 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 ABTB2Q8N961 1025 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 FTOQ9C0B1 505 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 ZNF75DP51815 510 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 ST3GAL1Q11201 340 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 CEP135Q66GS9 1140 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 PSMA5P28066 241 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 CCDC144BQ3MJ40 725 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 CCDC144CPQ8IYA2 1237 aa16.98■□□□□ 0.31
SCUBE2-201ENST00000309263 LEO1Q8WVC0 666 aaPredicted RBP16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 DNAJC2Q99543 621 aaKnown RBP16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 MAP3K2Q9Y2U5 619 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 ZSWIM6Q9HCJ5 1215 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 DLC1Q96QB1 1528 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 USP27XA6NNY8 438 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 BRF1Q92994 677 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 ZBTB9Q96C00 473 aa16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
SCUBE2-201ENST00000309263 UTP14CQ5TAP6 766 aaKnown RBP16.96■□□□□ 0.31
SCUBE2-201ENST00000309263 SLC27A2O14975 620 aa16.96■□□□□ 0.31
SCUBE2-201ENST00000309263 SKILP12757 684 aa16.96■□□□□ 0.31
SCUBE2-201ENST00000309263 PTPN14Q15678 1187 aa16.96■□□□□ 0.31
SCUBE2-201ENST00000309263 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
SCUBE2-201ENST00000309263 TECPR2O15040 1411 aa16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 CHGBP05060 677 aa16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 CCT2P78371 535 aaKnown RBP16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 EVI5LQ96CN4 794 aa16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 SMTNL1A8MU46 457 aa16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 CCDC129Q6ZRS4 1044 aa16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 ZNF215Q9UL58 517 aaPredicted RBP16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 AOX1Q06278 1338 aa16.95■□□□□ 0.3
SCUBE2-201ENST00000309263 DDX19AQ9NUU7 478 aaKnown RBP16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 NPHP3Q7Z494 1330 aa16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 LMTK3Q96Q04 1460 aa16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
SCUBE2-201ENST00000309263 ZBTB22O15209 634 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms