RNA–Protein interactions for RNA: ENST00000308647.7

ATAD3B-201, Transcript of ATPase family, AAA domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATAD3B, Length 2,448 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3B-201ENST00000308647 EAF2Q96CJ1 260 aaPredicted RBP27.51■■■□□ 2
ATAD3B-201ENST00000308647 KAZALD1Q96I82 304 aa27.51■■■□□ 2
ATAD3B-201ENST00000308647 SUCLG2Q96I99 432 aa27.51■■■□□ 2
ATAD3B-201ENST00000308647 KCNJ4P48050 445 aa27.51■■□□□ 1.99
ATAD3B-201ENST00000308647 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■□□□ 1.99
ATAD3B-201ENST00000308647 MAP4K1Q92918 833 aa27.5■■□□□ 1.99
ATAD3B-201ENST00000308647 TLR7Q9NYK1 1049 aaKnown RBP27.5■■□□□ 1.99
ATAD3B-201ENST00000308647 RBM33Q96EV2 1170 aaKnown RBP27.5■■□□□ 1.99
ATAD3B-201ENST00000308647 CCDC8Q9H0W5 538 aaPredicted RBP27.5■■□□□ 1.99
ATAD3B-201ENST00000308647 CDC37L1Q7L3B6 337 aa27.49■■□□□ 1.99
ATAD3B-201ENST00000308647 BICC1Q9H694 974 aaKnown RBP27.49■■□□□ 1.99
ATAD3B-201ENST00000308647 SLC27A2O14975 620 aa27.49■■□□□ 1.99
ATAD3B-201ENST00000308647 MYRIPQ8NFW9 859 aa27.49■■□□□ 1.99
ATAD3B-201ENST00000308647 A0A0D9SFI3 127 aa27.48■■□□□ 1.99
ATAD3B-201ENST00000308647 TTC6Q86TZ1 520 aa27.48■■□□□ 1.99
ATAD3B-201ENST00000308647 FERMT3Q86UX7 667 aa27.48■■□□□ 1.99
ATAD3B-201ENST00000308647 JARID2Q92833 1246 aaPredicted RBP27.48■■□□□ 1.99
ATAD3B-201ENST00000308647 TCEANC2Q96MN5 208 aa27.48■■□□□ 1.99
ATAD3B-201ENST00000308647 GRM8O00222 908 aa27.48■■□□□ 1.99
ATAD3B-201ENST00000308647 LARP1BQ659C4 914 aaKnown RBP27.48■■□□□ 1.99
ATAD3B-201ENST00000308647 CHD2O14647 1828 aaKnown RBP27.47■■□□□ 1.99
ATAD3B-201ENST00000308647 FAM173BQ6P4H8 233 aa27.47■■□□□ 1.99
ATAD3B-201ENST00000308647 TAF6LQ9Y6J9 622 aa27.47■■□□□ 1.99
ATAD3B-201ENST00000308647 HEG1Q9ULI3 1381 aa27.47■■□□□ 1.99
ATAD3B-201ENST00000308647 C1orf141Q5JVX7 400 aa27.47■■□□□ 1.99
ATAD3B-201ENST00000308647 ADGRL3Q9HAR2 1447 aa27.46■■□□□ 1.99
ATAD3B-201ENST00000308647 LINS1Q8NG48 757 aa27.46■■□□□ 1.99
ATAD3B-201ENST00000308647 SPTLC3Q9NUV7 552 aa27.46■■□□□ 1.99
ATAD3B-201ENST00000308647 NPHP4O75161 1426 aaPredicted RBP27.45■■□□□ 1.99
ATAD3B-201ENST00000308647 G3BP1Q13283 466 aaKnown RBP eCLIP27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 ARID3AQ99856 593 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 SIL1Q9H173 461 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 BOLA2Q9H3K6 86 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 SNRKQ9NRH2 765 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 CHMP3Q9Y3E7 222 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 HIP1O00291 1037 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 AMOTQ4VCS5 1084 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 KLHL34Q8N239 644 aa27.45■■□□□ 1.98
ATAD3B-201ENST00000308647 NCAPD2Q15021 1401 aa27.44■■□□□ 1.98
ATAD3B-201ENST00000308647 KRT85P78386 507 aa27.44■■□□□ 1.98
ATAD3B-201ENST00000308647 PSME1Q06323 249 aa27.44■■□□□ 1.98
ATAD3B-201ENST00000308647 AIMP1Q12904 312 aaKnown RBP27.44■■□□□ 1.98
ATAD3B-201ENST00000308647 KCNH5Q8NCM2 988 aa27.44■■□□□ 1.98
ATAD3B-201ENST00000308647 HDAC5Q9UQL6 1122 aa27.44■■□□□ 1.98
ATAD3B-201ENST00000308647 CCDC192P0DO97 292 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 PSMA5P28066 241 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 FSD1Q9BTV5 496 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 KCNF1Q9H3M0 494 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 UTYO14607 1347 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 LIG1P18858 919 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 KLHDC4Q8TBB5 520 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 PRIMPOLQ96LW4 560 aa27.43■■□□□ 1.98
ATAD3B-201ENST00000308647 BLOC1S2Q6QNY1 142 aa27.42■■□□□ 1.98
ATAD3B-201ENST00000308647 MTERF4Q7Z6M4 381 aaKnown RBP27.42■■□□□ 1.98
ATAD3B-201ENST00000308647 TSC1Q92574 1164 aa27.42■■□□□ 1.98
ATAD3B-201ENST00000308647 MED23Q9ULK4 1368 aa27.42■■□□□ 1.98
ATAD3B-201ENST00000308647 PHRF1Q9P1Y6 1649 aaKnown RBP27.42■■□□□ 1.98
ATAD3B-201ENST00000308647 ZNF589Q86UQ0 364 aaPredicted RBP27.41■■□□□ 1.98
ATAD3B-201ENST00000308647 TOB2Q14106 344 aaPredicted RBP27.41■■□□□ 1.98
ATAD3B-201ENST00000308647 CAMK4Q16566 473 aa27.41■■□□□ 1.98
ATAD3B-201ENST00000308647 ESCO1Q5FWF5 840 aa27.41■■□□□ 1.98
ATAD3B-201ENST00000308647 SPC24Q8NBT2 197 aa27.41■■□□□ 1.98
ATAD3B-201ENST00000308647 FER1L4A9Z1Z3 1794 aa27.41■■□□□ 1.98
ATAD3B-201ENST00000308647 RPS6KB1P23443 525 aa27.4■■□□□ 1.98
ATAD3B-201ENST00000308647 PKNOX2Q96KN3 472 aa27.4■■□□□ 1.98
ATAD3B-201ENST00000308647 PYCARDQ9ULZ3 195 aa27.4■■□□□ 1.98
ATAD3B-201ENST00000308647 OVOS2A0A0G2JMS6 1433 aa27.4■■□□□ 1.98
ATAD3B-201ENST00000308647 ELP1O95163 1332 aa27.4■■□□□ 1.98
ATAD3B-201ENST00000308647 NUP62CLQ9H1M0 184 aa27.4■■□□□ 1.98
ATAD3B-201ENST00000308647 IGKV5-2P06315 115 aa27.39■■□□□ 1.98
ATAD3B-201ENST00000308647 PDIA6Q15084 440 aa27.39■■□□□ 1.97
ATAD3B-201ENST00000308647 MAP3K11Q16584 847 aa27.39■■□□□ 1.97
ATAD3B-201ENST00000308647 RNF20Q5VTR2 975 aa27.39■■□□□ 1.97
ATAD3B-201ENST00000308647 KIAA1524Q8TCG1 905 aa27.39■■□□□ 1.97
ATAD3B-201ENST00000308647 MRVI1Q9Y6F6 885 aa27.39■■□□□ 1.97
ATAD3B-201ENST00000308647 PDCP20941 246 aa27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 HMGN5P82970 282 aaKnown RBP27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 LARP1Q6PKG0 1096 aaKnown RBP27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 EDC3Q96F86 508 aaKnown RBP27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 DDX21Q9NR30 783 aaKnown RBP eCLIP27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 DDX58O95786 925 aaKnown RBP27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 STK3Q13188 491 aa27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 FAM200AQ8TCP9 573 aa27.38■■□□□ 1.97
ATAD3B-201ENST00000308647 TYRO3Q06418 890 aa27.37■■□□□ 1.97
ATAD3B-201ENST00000308647 ANKRD1Q15327 319 aa27.37■■□□□ 1.97
ATAD3B-201ENST00000308647 GTF2F1P35269 517 aaKnown RBP eCLIP27.37■■□□□ 1.972e-7■■■■■ 33.2
ATAD3B-201ENST00000308647 ANKRD24Q8TF21 1146 aa27.37■■□□□ 1.97
ATAD3B-201ENST00000308647 JCADQ9P266 1359 aa27.37■■□□□ 1.97
ATAD3B-201ENST00000308647 ARHGEF25Q86VW2 580 aa27.36■■□□□ 1.97
ATAD3B-201ENST00000308647 TFIP11Q9UBB9 837 aaKnown RBP27.36■■□□□ 1.97
ATAD3B-201ENST00000308647 GCP02774 474 aa27.36■■□□□ 1.97
ATAD3B-201ENST00000308647 LUZP1Q86V48 1076 aa27.36■■□□□ 1.97
ATAD3B-201ENST00000308647 CKAP2LQ8IYA6 745 aa27.36■■□□□ 1.97
ATAD3B-201ENST00000308647 ZNF710Q8N1W2 664 aa27.36■■□□□ 1.97
ATAD3B-201ENST00000308647 DACT1Q9NYF0 836 aa27.36■■□□□ 1.97
ATAD3B-201ENST00000308647 PDIA4P13667 645 aaKnown RBP27.35■■□□□ 1.97
ATAD3B-201ENST00000308647 SIPA1L3O60292 1781 aaPredicted RBP27.35■■□□□ 1.97
ATAD3B-201ENST00000308647 EPHA10Q5JZY3 1008 aa27.35■■□□□ 1.97
ATAD3B-201ENST00000308647 RIC3Q7Z5B4 369 aa27.34■■□□□ 1.97
ATAD3B-201ENST00000308647 SPATA32Q96LK8 384 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms