RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 EDC3Q96F86 508 aaKnown RBP12.69□□□□□ -0.38
MUC4-201ENST00000308466 IFT172Q9UG01 1749 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 CRB1P82279 1406 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 GOLIM4O00461 696 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 ZSCAN22P10073 491 aaPredicted RBP12.69□□□□□ -0.38
MUC4-201ENST00000308466 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 FSD2A1L4K1 749 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 BECN2A8MW95 431 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 HSPA2P54652 639 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
MUC4-201ENST00000308466 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 GOLGA6L19H0YKK7 550 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 LRRFIP1Q32MZ4 808 aaKnown RBP12.68□□□□□ -0.38
MUC4-201ENST00000308466 SASS6Q6UVJ0 657 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 SYT1P21579 422 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
MUC4-201ENST00000308466 LRSAM1Q6UWE0 723 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 RALYLQ86SE5 291 aaKnown RBP12.68□□□□□ -0.38
MUC4-201ENST00000308466 INTS4Q96HW7 963 aaKnown RBP12.68□□□□□ -0.38
MUC4-201ENST00000308466 SH2B1Q9NRF2 756 aaPredicted RBP12.68□□□□□ -0.38
MUC4-201ENST00000308466 USP25Q9UHP3 1055 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 ADGRB2O60241 1585 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 HSPA4P34932 840 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 DNM1Q05193 864 aaKnown RBP12.68□□□□□ -0.38
MUC4-201ENST00000308466 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 SPATA32Q96LK8 384 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 STAP2Q9UGK3 403 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 USP31Q70CQ4 1352 aa12.68□□□□□ -0.38
MUC4-201ENST00000308466 CDC42BPGQ6DT37 1551 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 USP32Q8NFA0 1604 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 TRDNQ13061 729 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 EAF2Q96CJ1 260 aaPredicted RBP12.67□□□□□ -0.38
MUC4-201ENST00000308466 IFIT1P09914 478 aaKnown RBP12.67□□□□□ -0.38
MUC4-201ENST00000308466 PTH1RQ03431 593 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 TFCP2Q12800 502 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 GIMAP6Q6P9H5 292 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 AGLP35573 1532 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 HCLS1P14317 486 aaPredicted RBP12.67□□□□□ -0.38
MUC4-201ENST00000308466 CREB3L3Q68CJ9 461 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 PRDM4Q9UKN5 801 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 RAD50Q92878 1312 aa12.67□□□□□ -0.38
MUC4-201ENST00000308466 PTPRUQ92729 1446 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 GADD45BO75293 160 aaPredicted RBP12.66□□□□□ -0.38
MUC4-201ENST00000308466 GPTP24298 496 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 GUCY1B3Q02153 619 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 KIF6Q6ZMV9 814 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 CCT2P78371 535 aaKnown RBP12.66□□□□□ -0.38
MUC4-201ENST00000308466 FAM173BQ6P4H8 233 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
MUC4-201ENST00000308466 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 LETM1O95202 739 aaPredicted RBP12.66□□□□□ -0.38
MUC4-201ENST00000308466 KRT32Q14532 448 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 CCDC183Q5T5S1 534 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 TNMDQ9H2S6 317 aa12.66□□□□□ -0.38
MUC4-201ENST00000308466 TIMM10P62072 90 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 MTERF4Q7Z6M4 381 aaKnown RBP12.65□□□□□ -0.38
MUC4-201ENST00000308466 CKAP2LQ8IYA6 745 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 IPO4Q8TEX9 1081 aaKnown RBP12.65□□□□□ -0.38
MUC4-201ENST00000308466 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 CCDC192P0DO97 292 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 SLC52A2Q9HAB3 445 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 BRD1O95696 1058 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 GPT2Q8TD30 523 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 NEK1Q96PY6 1258 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 SDF4Q9BRK5 362 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
MUC4-201ENST00000308466 F13A1P00488 732 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 GCKRQ14397 625 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 CCDC129Q6ZRS4 1044 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 ZCRB1Q8TBF4 217 aaKnown RBP12.64□□□□□ -0.39
MUC4-201ENST00000308466 BRF1Q92994 677 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 DBNDD2Q9BQY9 259 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
MUC4-201ENST00000308466 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 NFXL1Q6ZNB6 911 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 NUP62CLQ9H1M0 184 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 AOX1Q06278 1338 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 A1BGP04217 495 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 HAND2P61296 217 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 METTL22Q9BUU2 404 aaPredicted RBP12.64□□□□□ -0.39
MUC4-201ENST00000308466 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
MUC4-201ENST00000308466 SPATA31D1Q6ZQQ2 1576 aa12.63□□□□□ -0.39
MUC4-201ENST00000308466 UBE2HP62256 183 aa12.63□□□□□ -0.39
MUC4-201ENST00000308466 ZBTB22O15209 634 aa12.63□□□□□ -0.39
MUC4-201ENST00000308466 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms